RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ZC3H6P61129 1189 aaKnown RBP5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 SF1Q15637 639 aaKnown RBP5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 DDR2Q16832 855 aa5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 ACBD5Q5T8D3 534 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 EEPD1Q7L9B9 569 aa5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 CCDC103Q8IW40 242 aa5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 TMEM151BQ8IW70 566 aa5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 BTN2A2Q8WVV5 523 aa5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 HNRNPLLQ8WVV9 542 aaKnown RBP5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 TSPAN17Q96FV3 270 aa5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 TMEFF2Q9UIK5 374 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 PLA2G2DQ9UNK4 145 aa5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 RWDD3Q9Y3V2 267 aa5.27□□□□□ -1.57
HMGB3P12-201ENST00000438745 A0A1W2PQU0 124 aa5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 ATF2P15336 505 aa5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 PI3P19957 117 aa5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 GFRA1P56159 465 aa5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 ZNF200P98182 395 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 RAB33AQ14088 237 aa5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 SLC9A5Q14940 896 aa5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 SLC10A6Q3KNW5 377 aa5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 DENND5AQ6IQ26 1287 aa5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 Q8N1Y9 231 aa5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 PPP1R14AQ96A00 147 aa5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 C1orf159Q96HA4 380 aa5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 RNF38Q9H0F5 515 aa5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 RAPGEFL1Q9UHV5 662 aa5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 NPFFR2Q9Y5X5 522 aa5.26□□□□□ -1.57
HMGB3P12-201ENST00000438745 RFXAPO00287 272 aa5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 ZBTB7AO95365 584 aa5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 NCAM1P13591 858 aa5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 NCKAP1LP55160 1127 aa5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 TARBP2Q15633 366 aaKnown RBP5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 NAALADL2Q58DX5 795 aa5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 SLC35F1Q5T1Q4 408 aa5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 TCERG1LQ5VWI1 586 aa5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 CNKSR3Q6P9H4 555 aa5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 TTLL10Q6ZVT0 673 aa5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 CPA5Q8WXQ8 436 aa5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 PEX11GQ96HA9 241 aa5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 SGSM3Q96HU1 749 aa5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 ST7Q9NRC1 585 aa5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 LRP2BPQ9P2M1 347 aa5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 BICRAQ9NZM4 1560 aa5.25□□□□□ -1.57
HMGB3P12-201ENST00000438745 FUCA1P04066 466 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 NTRK1P04629 796 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 ASGR2P07307 311 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 PFKLP17858 780 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 GRIA2P42262 883 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 PPP2R2AP63151 447 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 FOXO4P98177 505 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 WWC2Q6AWC2 1192 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 CABP7Q86V35 215 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 RIOX2Q8IUF8 465 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 MARCH10Q8NA82 808 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 RCBTB1Q8NDN9 531 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 ST13P5Q8NFI4 369 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 DIO2Q92813 273 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 C8orf37Q96NL8 207 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 KCNC2Q96PR1 638 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 MSRB2Q9Y3D2 182 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 R3HCC1Q9Y3T6 440 aaKnown RBP5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 TIMM13Q9Y5L4 95 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 X6R8D5 127 aa5.24□□□□□ -1.57
HMGB3P12-201ENST00000438745 SNRPB2P08579 225 aaKnown RBP5.23□□□□□ -1.57
HMGB3P12-201ENST00000438745 AFF3P51826 1226 aaKnown RBP5.23□□□□□ -1.57
HMGB3P12-201ENST00000438745 GTF2A2P52657 109 aa5.23□□□□□ -1.57
HMGB3P12-201ENST00000438745 HTRA3P83110 453 aa5.23□□□□□ -1.57
HMGB3P12-201ENST00000438745 MAP4K2Q12851 820 aa5.23□□□□□ -1.57
HMGB3P12-201ENST00000438745 PRSS53Q2L4Q9 553 aa5.23□□□□□ -1.57
HMGB3P12-201ENST00000438745 TP53I13Q8NBR0 393 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P12-201ENST00000438745 TMEM145Q8NBT3 493 aa5.23□□□□□ -1.57
HMGB3P12-201ENST00000438745 ZNF669Q96BR6 464 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P12-201ENST00000438745 RXFP1Q9HBX9 757 aa5.23□□□□□ -1.57
HMGB3P12-201ENST00000438745 NUDT5Q9UKK9 219 aa5.23□□□□□ -1.57
HMGB3P12-201ENST00000438745 C22orf46C9J442 243 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 AGRPO00253 132 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 MEFVO15553 781 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 SGSM2O43147 1006 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 DLX3O60479 287 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 LTBRP36941 435 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 ECI1P42126 302 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 SLC6A11P48066 632 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 RPL11P62913 178 aaKnown RBP5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 RBL2Q08999 1139 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 KCNAB2Q13303 367 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 LILRA6Q6PI73 481 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 B3GNT8Q7Z7M8 397 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 NLRP10Q86W26 655 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 NLGN1Q8N2Q7 840 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 LINC01356Q8N9X3 169 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 USP33Q8TEY7 942 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 ALG3Q92685 438 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 PWWP2AQ96N64 755 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 CDIP1Q9H305 208 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 MARCH2Q9P0N8 246 aa5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 DBR1Q9UK59 544 aaKnown RBP5.22□□□□□ -1.57
HMGB3P12-201ENST00000438745 EIF4G1Q04637 1599 aaKnown RBP5.21□□□□□ -1.57
HMGB3P12-201ENST00000438745 FFAR3O14843 346 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms