RNA–Protein interactions for RNA: ENST00000438067.5

PTCH2-202, Transcript of patched 2, humanhuman

TSL 3

Gene PTCH2, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-202ENST00000438067 TSPYL2Q9H2G4 693 aaPredicted RBP20.34■□□□□ 0.85
PTCH2-202ENST00000438067 TRANK1O15050 2925 aa20.33■□□□□ 0.85
PTCH2-202ENST00000438067 B4DLN1 442 aa20.33■□□□□ 0.85
PTCH2-202ENST00000438067 PITPNM1O00562 1244 aa20.33■□□□□ 0.85
PTCH2-202ENST00000438067 CA3P07451 260 aa20.33■□□□□ 0.85
PTCH2-202ENST00000438067 PCP11498 1178 aaKnown RBP20.33■□□□□ 0.85
PTCH2-202ENST00000438067 MRPL12P52815 198 aaKnown RBP20.33■□□□□ 0.85
PTCH2-202ENST00000438067 PTPN11Q06124 597 aaPredicted RBP20.33■□□□□ 0.85
PTCH2-202ENST00000438067 MICALL1Q8N3F8 863 aa20.33■□□□□ 0.85
PTCH2-202ENST00000438067 RGS22Q8NE09 1264 aa20.33■□□□□ 0.85
PTCH2-202ENST00000438067 IL27Q8NEV9 243 aa20.33■□□□□ 0.85
PTCH2-202ENST00000438067 NCOR1O75376 2440 aa20.33■□□□□ 0.84
PTCH2-202ENST00000438067 REV3LO60673 3130 aa20.32■□□□□ 0.84
PTCH2-202ENST00000438067 XIRP2A4UGR9 3374 aa20.32■□□□□ 0.84
PTCH2-202ENST00000438067 RFXAPO00287 272 aa20.32■□□□□ 0.84
PTCH2-202ENST00000438067 ARIH2O95376 493 aa20.32■□□□□ 0.84
PTCH2-202ENST00000438067 GOLGA8HP0CJ92 632 aa20.32■□□□□ 0.84
PTCH2-202ENST00000438067 POU3F3P20264 500 aaPredicted RBP20.32■□□□□ 0.84
PTCH2-202ENST00000438067 COL9A1P20849 921 aa20.32■□□□□ 0.84
PTCH2-202ENST00000438067 USH1GQ495M9 461 aa20.32■□□□□ 0.84
PTCH2-202ENST00000438067 GPATCH4Q5T3I0 446 aaKnown RBP20.32■□□□□ 0.84
PTCH2-202ENST00000438067 TBC1D10CQ8IV04 446 aa20.32■□□□□ 0.84
PTCH2-202ENST00000438067 PHOSPHO2Q8TCD6 241 aa20.32■□□□□ 0.84
PTCH2-202ENST00000438067 FTOQ9C0B1 505 aaKnown RBP eCLIP20.32■□□□□ 0.84
PTCH2-202ENST00000438067 UBA5Q9GZZ9 404 aa20.32■□□□□ 0.84
PTCH2-202ENST00000438067 CCDC171Q6TFL3 1326 aa20.31■□□□□ 0.84
PTCH2-202ENST00000438067 BMP1P13497 986 aa20.31■□□□□ 0.84
PTCH2-202ENST00000438067 BFSP2Q13515 415 aa20.31■□□□□ 0.84
PTCH2-202ENST00000438067 HDAC1Q13547 482 aaPredicted RBP20.31■□□□□ 0.84
PTCH2-202ENST00000438067 CCDC62Q6P9F0 684 aa20.31■□□□□ 0.84
PTCH2-202ENST00000438067 TBC1D5Q92609 795 aa20.31■□□□□ 0.84
PTCH2-202ENST00000438067 ESR2Q92731 530 aa20.31■□□□□ 0.84
PTCH2-202ENST00000438067 SLC9A7Q96T83 725 aa20.31■□□□□ 0.84
PTCH2-202ENST00000438067 ZKSCAN3Q9BRR0 538 aa20.31■□□□□ 0.84
PTCH2-202ENST00000438067 CPVLQ9H3G5 476 aa20.31■□□□□ 0.84
PTCH2-202ENST00000438067 RNF41Q9H4P4 317 aaPredicted RBP20.31■□□□□ 0.84
PTCH2-202ENST00000438067 CERS4Q9HA82 394 aa20.31■□□□□ 0.84
PTCH2-202ENST00000438067 NOD1Q9Y239 953 aa20.31■□□□□ 0.84
PTCH2-202ENST00000438067 MTCH2Q9Y6C9 303 aa20.31■□□□□ 0.84
PTCH2-202ENST00000438067 RRP1P56182 461 aaKnown RBP20.3■□□□□ 0.84
PTCH2-202ENST00000438067 CHMP4BP1P59074 171 aa20.3■□□□□ 0.84
PTCH2-202ENST00000438067 TFF2Q03403 129 aa20.3■□□□□ 0.84
PTCH2-202ENST00000438067 DGKHQ86XP1 1220 aa20.3■□□□□ 0.84
PTCH2-202ENST00000438067 AFG1LQ8WV93 481 aa20.3■□□□□ 0.84
PTCH2-202ENST00000438067 CRBNQ96SW2 442 aa20.3■□□□□ 0.84
PTCH2-202ENST00000438067 TRIM6-TRIM34B2RNG4 842 aa20.29■□□□□ 0.84
PTCH2-202ENST00000438067 TAP1Q03518 808 aa20.29■□□□□ 0.84
PTCH2-202ENST00000438067 HERC6Q8IVU3 1022 aa20.29■□□□□ 0.84
PTCH2-202ENST00000438067 TAAR1Q96RJ0 339 aa20.29■□□□□ 0.84
PTCH2-202ENST00000438067 MAF1Q9H063 256 aa20.29■□□□□ 0.84
PTCH2-202ENST00000438067 NEDD4P46934 1319 aa20.28■□□□□ 0.84
PTCH2-202ENST00000438067 GBF1Q92538 1859 aa20.28■□□□□ 0.84
PTCH2-202ENST00000438067 SCN10AQ9Y5Y9 1956 aa20.28■□□□□ 0.84
PTCH2-202ENST00000438067 EPOPA6NHQ4 379 aa20.28■□□□□ 0.84
PTCH2-202ENST00000438067 GTPBP6O43824 516 aaPredicted RBP20.28■□□□□ 0.84
PTCH2-202ENST00000438067 ARHGEF15O94989 841 aa20.28■□□□□ 0.84
PTCH2-202ENST00000438067 SKIV2LQ15477 1246 aaKnown RBP20.28■□□□□ 0.84
PTCH2-202ENST00000438067 PTGISQ16647 500 aa20.28■□□□□ 0.84
PTCH2-202ENST00000438067 LY6KQ17RY6 165 aa20.28■□□□□ 0.84
PTCH2-202ENST00000438067 AAK1Q2M2I8 961 aa20.28■□□□□ 0.84
PTCH2-202ENST00000438067 SEPT14Q6ZU15 432 aa20.28■□□□□ 0.84
PTCH2-202ENST00000438067 SYTL5Q8TDW5 730 aaPredicted RBP20.28■□□□□ 0.84
PTCH2-202ENST00000438067 NSUN6Q8TEA1 469 aaKnown RBP20.28■□□□□ 0.84
PTCH2-202ENST00000438067 RILPL2Q969X0 211 aa20.28■□□□□ 0.84
PTCH2-202ENST00000438067 NECAB3Q96P71 396 aaPredicted RBP20.28■□□□□ 0.84
PTCH2-202ENST00000438067 KIF28PB7ZC32 967 aa20.27■□□□□ 0.84
PTCH2-202ENST00000438067 ZNF213O14771 459 aa20.27■□□□□ 0.84
PTCH2-202ENST00000438067 GH1P01241 217 aa20.27■□□□□ 0.84
PTCH2-202ENST00000438067 SDSP20132 328 aa20.27■□□□□ 0.84
PTCH2-202ENST00000438067 MFAP1P55081 439 aaKnown RBP20.27■□□□□ 0.84
PTCH2-202ENST00000438067 ARHGAP1Q07960 439 aa20.27■□□□□ 0.84
PTCH2-202ENST00000438067 CDC37Q16543 378 aaPredicted RBP20.27■□□□□ 0.84
PTCH2-202ENST00000438067 GDF6Q6KF10 455 aaPredicted RBP20.27■□□□□ 0.84
PTCH2-202ENST00000438067 SESTD1Q86VW0 696 aa20.27■□□□□ 0.84
PTCH2-202ENST00000438067 ADGRF4Q8IZF3 695 aa20.27■□□□□ 0.84
PTCH2-202ENST00000438067 PNMA1Q8ND90 353 aa20.27■□□□□ 0.84
PTCH2-202ENST00000438067 ARNTL2Q8WYA1 636 aa20.27■□□□□ 0.84
PTCH2-202ENST00000438067 CTAGE1Q96RT6 745 aa20.27■□□□□ 0.84
PTCH2-202ENST00000438067 LNPKQ9C0E8 428 aa20.27■□□□□ 0.84
PTCH2-202ENST00000438067 COL20A1Q9P218 1284 aa20.27■□□□□ 0.84
PTCH2-202ENST00000438067 ABCB11O95342 1321 aa20.27■□□□□ 0.83
PTCH2-202ENST00000438067 BAIAP3O94812 1187 aa20.26■□□□□ 0.83
PTCH2-202ENST00000438067 MMP3P08254 477 aa20.26■□□□□ 0.83
PTCH2-202ENST00000438067 KCNQ1P51787 676 aa20.26■□□□□ 0.83
PTCH2-202ENST00000438067 GPNMBQ14956 572 aa20.26■□□□□ 0.83
PTCH2-202ENST00000438067 STXBP2Q15833 593 aa20.26■□□□□ 0.83
PTCH2-202ENST00000438067 CCDC178Q5BJE1 867 aa20.26■□□□□ 0.83
PTCH2-202ENST00000438067 KRT40Q6A162 431 aa20.26■□□□□ 0.83
PTCH2-202ENST00000438067 IQCA1Q86XH1 822 aa20.26■□□□□ 0.83
PTCH2-202ENST00000438067 MCF2L2Q86YR7 1114 aa20.26■□□□□ 0.83
PTCH2-202ENST00000438067 CCDC155Q8N6L0 562 aa20.26■□□□□ 0.83
PTCH2-202ENST00000438067 CAGE1Q8TC20 777 aa20.26■□□□□ 0.83
PTCH2-202ENST00000438067 ANKS1AQ92625 1134 aa20.26■□□□□ 0.83
PTCH2-202ENST00000438067 KAT2BQ92831 832 aa20.26■□□□□ 0.83
PTCH2-202ENST00000438067 IWS1Q96ST2 819 aa20.26■□□□□ 0.83
PTCH2-202ENST00000438067 PRRC2BQ5JSZ5 2229 aaKnown RBP20.25■□□□□ 0.83
PTCH2-202ENST00000438067 KDM4AO75164 1064 aa20.25■□□□□ 0.83
PTCH2-202ENST00000438067 CASTP20810 708 aaKnown RBP20.25■□□□□ 0.83
PTCH2-202ENST00000438067 NT5C2P49902 561 aa20.25■□□□□ 0.83
PTCH2-202ENST00000438067 CHST3Q7LGC8 479 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms