RNA–Protein interactions for RNA: ENST00000437124.6

DDR1-237, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-237ENST00000437124 CERS4Q9HA82 394 aa17.73■□□□□ 0.43
DDR1-237ENST00000437124 PDGFCQ9NRA1 345 aa17.73■□□□□ 0.43
DDR1-237ENST00000437124 TRMT13Q9NUP7 481 aaKnown RBP17.73■□□□□ 0.43
DDR1-237ENST00000437124 POLR3EQ9NVU0 708 aa17.73■□□□□ 0.43
DDR1-237ENST00000437124 CYP39A1Q9NYL5 469 aa17.73■□□□□ 0.43
DDR1-237ENST00000437124 LMCD1Q9NZU5 365 aa17.73■□□□□ 0.43
DDR1-237ENST00000437124 CCPG1Q9ULG6 757 aa17.73■□□□□ 0.43
DDR1-237ENST00000437124 KIF28PB7ZC32 967 aa17.72■□□□□ 0.43
DDR1-237ENST00000437124 ICAM1P05362 532 aa17.72■□□□□ 0.43
DDR1-237ENST00000437124 PCP11498 1178 aaKnown RBP17.72■□□□□ 0.43
DDR1-237ENST00000437124 CYP2C9P11712 490 aa17.72■□□□□ 0.43
DDR1-237ENST00000437124 SLC16A2P36021 539 aa17.72■□□□□ 0.43
DDR1-237ENST00000437124 GRB10Q13322 594 aa17.72■□□□□ 0.43
DDR1-237ENST00000437124 DUSP28Q4G0W2 176 aa17.72■□□□□ 0.43
DDR1-237ENST00000437124 DEFB128Q7Z7B8 93 aa17.72■□□□□ 0.43
DDR1-237ENST00000437124 FBXO16Q8IX29 292 aaPredicted RBP17.72■□□□□ 0.43
DDR1-237ENST00000437124 EXOC6Q8TAG9 804 aa17.72■□□□□ 0.43
DDR1-237ENST00000437124 LPXNO60711 386 aa17.71■□□□□ 0.43
DDR1-237ENST00000437124 ARHGEF15O94989 841 aa17.71■□□□□ 0.43
DDR1-237ENST00000437124 MFAP1P55081 439 aaKnown RBP17.71■□□□□ 0.43
DDR1-237ENST00000437124 PURAQ00577 322 aaKnown RBP17.71■□□□□ 0.43
DDR1-237ENST00000437124 TMEM63BQ5T3F8 832 aa17.71■□□□□ 0.43
DDR1-237ENST00000437124 SYDE2Q5VT97 1194 aa17.71■□□□□ 0.43
DDR1-237ENST00000437124 MFSD6Q6ZSS7 791 aa17.71■□□□□ 0.43
DDR1-237ENST00000437124 TBC1D10CQ8IV04 446 aa17.71■□□□□ 0.43
DDR1-237ENST00000437124 TTC14Q96N46 770 aa17.71■□□□□ 0.43
DDR1-237ENST00000437124 GPCPD1Q9NPB8 672 aa17.71■□□□□ 0.43
DDR1-237ENST00000437124 DDX49Q9Y6V7 483 aaKnown RBP17.71■□□□□ 0.43
DDR1-237ENST00000437124 FRMPD2Q68DX3 1309 aaPredicted RBP17.71■□□□□ 0.42
DDR1-237ENST00000437124 LOC102724159A0A0B4J2E5 919 aa17.7■□□□□ 0.42
DDR1-237ENST00000437124 BAIAP3O94812 1187 aa17.7■□□□□ 0.42
DDR1-237ENST00000437124 IQCF3P0C7M6 154 aa17.7■□□□□ 0.42
DDR1-237ENST00000437124 PDHBP11177 359 aa17.7■□□□□ 0.42
DDR1-237ENST00000437124 CPT1AP50416 773 aa17.7■□□□□ 0.42
DDR1-237ENST00000437124 PWP2Q15269 919 aaKnown RBP17.7■□□□□ 0.42
DDR1-237ENST00000437124 NSMFQ6X4W1 530 aa17.7■□□□□ 0.42
DDR1-237ENST00000437124 KIAA1211Q6ZU35 1233 aa17.7■□□□□ 0.42
DDR1-237ENST00000437124 EEPD1Q7L9B9 569 aa17.7■□□□□ 0.42
DDR1-237ENST00000437124 SNHG28P0DPA3 235 aa17.69■□□□□ 0.42
DDR1-237ENST00000437124 NFRKBQ6P4R8 1299 aa17.69■□□□□ 0.42
DDR1-237ENST00000437124 PURBQ96QR8 312 aaKnown RBP17.69■□□□□ 0.42
DDR1-237ENST00000437124 MTG1Q9BT17 334 aaPredicted RBP17.69■□□□□ 0.42
DDR1-237ENST00000437124 RNF41Q9H4P4 317 aaPredicted RBP17.69■□□□□ 0.42
DDR1-237ENST00000437124 RBM47A0AV96 593 aaKnown RBP17.68■□□□□ 0.42
DDR1-237ENST00000437124 FAM86C2PA6NEL3 165 aa17.68■□□□□ 0.42
DDR1-237ENST00000437124 PRR33A8MZF0 331 aa17.68■□□□□ 0.42
DDR1-237ENST00000437124 PTPN11Q06124 597 aaPredicted RBP17.68■□□□□ 0.42
DDR1-237ENST00000437124 ZNF543Q08ER8 600 aa17.68■□□□□ 0.42
DDR1-237ENST00000437124 BAATQ14032 418 aaPredicted RBP17.68■□□□□ 0.42
DDR1-237ENST00000437124 CD320Q9NPF0 282 aa17.68■□□□□ 0.42
DDR1-237ENST00000437124 LCTP09848 1927 aa17.68■□□□□ 0.42
DDR1-237ENST00000437124 NEDD4P46934 1319 aa17.68■□□□□ 0.42
DDR1-237ENST00000437124 NFIBO00712 420 aa17.67■□□□□ 0.42
DDR1-237ENST00000437124 ZNF213O14771 459 aa17.67■□□□□ 0.42
DDR1-237ENST00000437124 CWC27Q6UX04 472 aaKnown RBP17.67■□□□□ 0.42
DDR1-237ENST00000437124 RETREG2Q8NC44 543 aa17.67■□□□□ 0.42
DDR1-237ENST00000437124 ESR2Q92731 530 aa17.67■□□□□ 0.42
DDR1-237ENST00000437124 WDR11Q9BZH6 1224 aa17.67■□□□□ 0.42
DDR1-237ENST00000437124 GPHNQ9NQX3 736 aaPredicted RBP17.67■□□□□ 0.42
DDR1-237ENST00000437124 DIAPH3Q9NSV4 1193 aa17.67■□□□□ 0.42
DDR1-237ENST00000437124 ADD3Q9UEY8 706 aaKnown RBP17.67■□□□□ 0.42
DDR1-237ENST00000437124 SCN5AQ14524 2016 aa17.67■□□□□ 0.42
DDR1-237ENST00000437124 TANC1Q9C0D5 1861 aa17.67■□□□□ 0.42
DDR1-237ENST00000437124 BRWD1Q9NSI6 2320 aa17.66■□□□□ 0.42
DDR1-237ENST00000437124 KPNA6O60684 536 aa17.66■□□□□ 0.42
DDR1-237ENST00000437124 NT5C2P49902 561 aa17.66■□□□□ 0.42
DDR1-237ENST00000437124 BFSP2Q13515 415 aa17.66■□□□□ 0.42
DDR1-237ENST00000437124 NBPF20Q3BBV1 942 aa17.66■□□□□ 0.42
DDR1-237ENST00000437124 BRDTQ58F21 947 aaPredicted RBP17.66■□□□□ 0.42
DDR1-237ENST00000437124 DGKHQ86XP1 1220 aa17.66■□□□□ 0.42
DDR1-237ENST00000437124 CLEC4DQ8WXI8 215 aa17.66■□□□□ 0.42
DDR1-237ENST00000437124 FTOQ9C0B1 505 aaKnown RBP eCLIP17.66■□□□□ 0.42
DDR1-237ENST00000437124 PNMA2Q9UL42 364 aa17.66■□□□□ 0.42
DDR1-237ENST00000437124 SCN10AQ9Y5Y9 1956 aa17.66■□□□□ 0.42
DDR1-237ENST00000437124 COL4A4P53420 1690 aaPredicted RBP17.65■□□□□ 0.42
DDR1-237ENST00000437124 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.65■□□□□ 0.42
DDR1-237ENST00000437124 A6NJR5 290 aa17.65■□□□□ 0.42
DDR1-237ENST00000437124 HIP1O00291 1037 aa17.65■□□□□ 0.42
DDR1-237ENST00000437124 MYL3P08590 195 aa17.65■□□□□ 0.42
DDR1-237ENST00000437124 ALDH5A1P51649 535 aaPredicted RBP17.65■□□□□ 0.42
DDR1-237ENST00000437124 SPRED2Q7Z698 418 aa17.65■□□□□ 0.42
DDR1-237ENST00000437124 ALYREFQ86V81 257 aaKnown RBP17.65■□□□□ 0.42
DDR1-237ENST00000437124 ZKSCAN3Q9BRR0 538 aa17.65■□□□□ 0.42
DDR1-237ENST00000437124 WDR19Q8NEZ3 1342 aa17.65■□□□□ 0.42
DDR1-237ENST00000437124 PTPDC1A2A3K4 754 aa17.64■□□□□ 0.41
DDR1-237ENST00000437124 NKRFO15226 690 aaKnown RBP eCLIP17.64■□□□□ 0.41
DDR1-237ENST00000437124 KDM4AO75164 1064 aa17.64■□□□□ 0.41
DDR1-237ENST00000437124 KCNJ6P48051 423 aa17.64■□□□□ 0.41
DDR1-237ENST00000437124 LEXMQ3ZCV2 418 aa17.64■□□□□ 0.41
DDR1-237ENST00000437124 FAM47CQ5HY64 1035 aa17.64■□□□□ 0.41
DDR1-237ENST00000437124 GPATCH4Q5T3I0 446 aaKnown RBP17.64■□□□□ 0.41
DDR1-237ENST00000437124 SLC30A10Q6XR72 485 aa17.64■□□□□ 0.41
DDR1-237ENST00000437124 FAM178BQ8IXR5 827 aa17.64■□□□□ 0.41
DDR1-237ENST00000437124 GJD3Q8N144 294 aa17.64■□□□□ 0.41
DDR1-237ENST00000437124 OR6J1Q8NGC5 347 aa17.64■□□□□ 0.41
DDR1-237ENST00000437124 ANKS1AQ92625 1134 aa17.64■□□□□ 0.41
DDR1-237ENST00000437124 DSCC1Q9BVC3 393 aa17.64■□□□□ 0.41
DDR1-237ENST00000437124 UBE2ZQ9H832 354 aaPredicted RBP17.64■□□□□ 0.41
DDR1-237ENST00000437124 RAD50Q92878 1312 aa17.64■□□□□ 0.41
DDR1-237ENST00000437124 LAMA4Q16363 1823 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms