RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 GAS2L1Q99501 681 aaPredicted RBP9.11□□□□□ -0.95
VPS50-203ENST00000436177 LNPKQ9C0E8 428 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 RWDD1Q9H446 243 aaPredicted RBP9.11□□□□□ -0.95
VPS50-203ENST00000436177 INCENPQ9NQS7 918 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 IL17RBQ9NRM6 502 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 MSRAQ9UJ68 235 aa9.11□□□□□ -0.95
VPS50-203ENST00000436177 ZMYM6O95789 1325 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 LOC102724159A0A0B4J2E5 919 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.1□□□□□ -0.95
VPS50-203ENST00000436177 FOXP2O15409 715 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 DHX16O60231 1041 aaKnown RBP9.1□□□□□ -0.95
VPS50-203ENST00000436177 FGAP02671 866 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 SMPD1P17405 629 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 CYP2C18P33260 490 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 CPT1AP50416 773 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 CDK7P50613 346 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 NMIQ13287 307 aaPredicted RBP9.1□□□□□ -0.95
VPS50-203ENST00000436177 BAATQ14032 418 aaPredicted RBP9.1□□□□□ -0.95
VPS50-203ENST00000436177 PPP2R5BQ15173 497 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 PWP2Q15269 919 aaKnown RBP9.1□□□□□ -0.95
VPS50-203ENST00000436177 RAB30Q15771 203 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 CCDC178Q5BJE1 867 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 FAM47CQ5HY64 1035 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 GPATCH4Q5T3I0 446 aaKnown RBP9.1□□□□□ -0.95
VPS50-203ENST00000436177 RNF207Q6ZRF8 634 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 IQCA1Q86XH1 822 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 FAM126BQ8IXS8 530 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 TMEM47Q9BQJ4 181 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.1□□□□□ -0.95
VPS50-203ENST00000436177 KATNBL1Q9H079 304 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 RANBP17Q9H2T7 1088 aaKnown RBP9.1□□□□□ -0.95
VPS50-203ENST00000436177 TTYH1Q9H313 450 aaPredicted RBP9.1□□□□□ -0.95
VPS50-203ENST00000436177 POLR3EQ9NVU0 708 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 Q9Y3F1 56 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 PLXNA1Q9UIW2 1896 aa9.1□□□□□ -0.95
VPS50-203ENST00000436177 MYH4Q9Y623 1939 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 SALL3Q9BXA9 1300 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 ZBBXA8MT70 800 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 HIP1O00291 1037 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 NFIBO00712 420 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 ZNF213O14771 459 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 FGBP02675 491 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 MYL3P08590 195 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 SUPT20HL2P0C7V6 817 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 ACRP10323 421 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 HSPD1P10809 573 aaKnown RBP9.09□□□□□ -0.95
VPS50-203ENST00000436177 PDHBP11177 359 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 NT5C2P49902 561 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 ALDH5A1P51649 535 aaPredicted RBP9.09□□□□□ -0.95
VPS50-203ENST00000436177 DUSP28Q4G0W2 176 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 TMEM240Q5SV17 173 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 AKNAD1Q5T1N1 836 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 TTBK2Q6IQ55 1244 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 BTNL9Q6UXG8 535 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 ZNF365Q70YC5 407 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 RPUSD2Q8IZ73 545 aaKnown RBP9.09□□□□□ -0.95
VPS50-203ENST00000436177 OR6J1Q8NGC5 347 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 SCFD2Q8WU76 684 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 TTC14Q96N46 770 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 WDR11Q9BZH6 1224 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 ZNF576Q9H609 170 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 KAT14Q9H8E8 782 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 IL23AQ9NPF7 189 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 PDGFCQ9NRA1 345 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 TCP11L1Q9NUJ3 509 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 GNEQ9Y223 722 aaKnown RBP9.09□□□□□ -0.95
VPS50-203ENST00000436177 NOD1Q9Y239 953 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 DDX49Q9Y6V7 483 aaKnown RBP9.09□□□□□ -0.95
VPS50-203ENST00000436177 SMCHD1A6NHR9 2005 aa9.09□□□□□ -0.95
VPS50-203ENST00000436177 WDR19Q8NEZ3 1342 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 NKRFO15226 690 aaKnown RBP eCLIP9.08□□□□□ -0.96
VPS50-203ENST00000436177 CTAGE5O15320 804 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 FGRP09769 529 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 CCL23P55773 120 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 CHMP4BP1P59074 171 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 PSMC6P62333 389 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 NKX3-2P78367 333 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 ZNF543Q08ER8 600 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 GRIN2CQ14957 1233 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 USH1GQ495M9 461 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 B4GALNT3Q6L9W6 998 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 SLC30A10Q6XR72 485 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 ZNF589Q86UQ0 364 aaPredicted RBP9.08□□□□□ -0.96
VPS50-203ENST00000436177 TBC1D10CQ8IV04 446 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 IL27Q8NEV9 243 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 SYMPKQ92797 1274 aaKnown RBP9.08□□□□□ -0.96
VPS50-203ENST00000436177 YTHDC1Q96MU7 727 aaKnown RBP9.08□□□□□ -0.96
VPS50-203ENST00000436177 UBAC1Q9BSL1 405 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 MTG1Q9BT17 334 aaPredicted RBP9.08□□□□□ -0.96
VPS50-203ENST00000436177 COL25A1Q9BXS0 654 aaPredicted RBP9.08□□□□□ -0.96
VPS50-203ENST00000436177 TRPV6Q9H1D0 765 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 SLC28A3Q9HAS3 691 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 UNC80Q8N2C7 3258 aa9.08□□□□□ -0.96
VPS50-203ENST00000436177 ASTN1O14525 1302 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 ZNFX1Q9P2E3 1918 aaKnown RBP9.07□□□□□ -0.96
VPS50-203ENST00000436177 KPNA6O60684 536 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 CD4P01730 458 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 PFKMP08237 780 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 SDSP20132 328 aa9.07□□□□□ -0.96
VPS50-203ENST00000436177 NOVP48745 357 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms