RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 DDX42Q86XP3 938 aaKnown RBP eCLIP6.17□□□□□ -1.42
HMGB1P45-201ENST00000435986 SCLYQ96I15 445 aa6.17□□□□□ -1.42
HMGB1P45-201ENST00000435986 CCDC136Q96JN2 1154 aa6.17□□□□□ -1.42
HMGB1P45-201ENST00000435986 FCRL2Q96LA5 508 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P45-201ENST00000435986 MCMBPQ9BTE3 642 aa6.17□□□□□ -1.42
HMGB1P45-201ENST00000435986 AP5S1Q9NUS5 200 aa6.17□□□□□ -1.42
HMGB1P45-201ENST00000435986 TCEAL9Q9UHQ7 104 aa6.17□□□□□ -1.42
HMGB1P45-201ENST00000435986 PCDHA8Q9Y5H6 950 aa6.17□□□□□ -1.42
HMGB1P45-201ENST00000435986 PCDHA11Q9Y5I1 949 aa6.17□□□□□ -1.42
HMGB1P45-201ENST00000435986 RASGRP1O95267 797 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 MED26O95402 600 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 PRKCQQ04759 706 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 FAPQ12884 760 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 STRN3Q13033 797 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 LSAMPQ13449 338 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 INTS5Q6P9B9 1019 aaKnown RBP6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 NECAB2Q7Z6G3 386 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 RPUSD2Q8IZ73 545 aaKnown RBP6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 PLD6Q8N2A8 252 aaKnown RBP6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 AFAP1L2Q8N4X5 818 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 WDR66Q8TBY9 1149 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 FBXW5Q969U6 566 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 SCYL1Q96KG9 808 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 KRTAP4-8Q9BYQ9 185 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 IRF2BPLQ9H1B7 796 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 IFT22Q9H7X7 185 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 SEMA3GQ9NS98 782 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 TNFRSF10DQ9UBN6 386 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 NUB1Q9Y5A7 615 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 PCDHA2Q9Y5H9 948 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 PITPNM2Q9BZ72 1349 aa6.16□□□□□ -1.42
HMGB1P45-201ENST00000435986 KIAA1324LA8MWY0 1029 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 ARVCFO00192 962 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 MARCH6O60337 910 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 SOD2P04179 222 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 GUCY2FP51841 1108 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 ZNF460Q14592 562 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 CRY1Q16526 586 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 AOC3Q16853 763 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 ARHGAP44Q17R89 818 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 PLEKHG6Q3KR16 790 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 RTP2Q5QGT7 225 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 DENND5AQ6IQ26 1287 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 SHISA5Q8N114 240 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 PI4K2BQ8TCG2 481 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 ORAI3Q9BRQ5 295 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 LMCD1Q9NZU5 365 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 PLAGL2Q9UPG8 496 aa6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 APOBEC2Q9Y235 224 aaKnown RBP6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 COA3Q9Y2R0 106 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P45-201ENST00000435986 SRGAP2CP0DJJ0 459 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 PYGMP11217 842 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 GRK2P25098 689 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 SSTR4P31391 388 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 GRK3P35626 688 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 IL2P60568 153 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 SPIRE1Q08AE8 756 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 IKZF1Q13422 519 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 HSP90AB2PQ58FF8 381 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 ODR4Q5SWX8 454 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 CCDC181Q5TID7 509 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 PKN3Q6P5Z2 889 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 C16orf59Q7L2K0 433 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 SPATS2Q86XZ4 545 aaKnown RBP6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 PASD1Q8IV76 773 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 RCBTB1Q8NDN9 531 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 TMEM169Q96HH4 297 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 CELF4Q9BZC1 486 aaKnown RBP6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 ATP13A1Q9HD20 1204 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 CATSPERZQ9NTU4 200 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 SLC5A4Q9NY91 659 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 ZC3H7BQ9UGR2 993 aaKnown RBP6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 ADGRE2Q9UHX3 823 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 ASXL2Q76L83 1435 aa6.14□□□□□ -1.43
HMGB1P45-201ENST00000435986 A0A1W2PQ45 241 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 A0A1W2PQJ5 194 aa6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 A0A1W2PQY0 241 aa6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 H7BY64 318 aa6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 SPINK2P20155 84 aa6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 TEKQ02763 1124 aa6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 CYP4F3Q08477 520 aa6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 PCBP1Q15365 356 aaKnown RBP eCLIP6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 ANGEL2Q5VTE6 544 aaKnown RBP6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 CPNE8Q86YQ8 564 aa6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 SPPL2CQ8IUH8 684 aa6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 C2orf69Q8N8R5 385 aa6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 IGSF22Q8N9C0 903 aa6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 USP33Q8TEY7 942 aa6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 TRMT2BQ96GJ1 504 aaKnown RBP6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 BSDC1Q9NW68 430 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 CLDND1Q9NY35 253 aa6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 TMEFF2Q9UIK5 374 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P45-201ENST00000435986 MAFKO60675 156 aa6.12□□□□□ -1.43
HMGB1P45-201ENST00000435986 COBLO75128 1261 aa6.12□□□□□ -1.43
HMGB1P45-201ENST00000435986 KIR2DL1P43626 348 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P45-201ENST00000435986 KIR2DL2P43627 348 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P45-201ENST00000435986 CDKN1CP49918 316 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P45-201ENST00000435986 DNM2P50570 870 aa6.12□□□□□ -1.43
HMGB1P45-201ENST00000435986 CORO7P57737 925 aa6.12□□□□□ -1.43
HMGB1P45-201ENST00000435986 CHRNEQ04844 493 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms