RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 SCN10AQ9Y5Y9 1956 aa13.65□□□□□ -0.22
CHRNA1-207ENST00000435083 A6NJR5 290 aa13.65□□□□□ -0.22
CHRNA1-207ENST00000435083 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
CHRNA1-207ENST00000435083 ARHGEF15O94989 841 aa13.65□□□□□ -0.22
CHRNA1-207ENST00000435083 PLA2G5P39877 138 aa13.65□□□□□ -0.22
CHRNA1-207ENST00000435083 RPS6P62753 249 aaKnown RBP13.65□□□□□ -0.22
CHRNA1-207ENST00000435083 PTPN11Q06124 597 aaPredicted RBP13.65□□□□□ -0.22
CHRNA1-207ENST00000435083 PNMA2Q9UL42 364 aa13.65□□□□□ -0.22
CHRNA1-207ENST00000435083 COG5Q9UP83 839 aa13.65□□□□□ -0.22
CHRNA1-207ENST00000435083 PRRC2BQ5JSZ5 2229 aaKnown RBP13.64□□□□□ -0.23
CHRNA1-207ENST00000435083 B4DLN1 442 aa13.64□□□□□ -0.23
CHRNA1-207ENST00000435083 FGRP09769 529 aa13.64□□□□□ -0.23
CHRNA1-207ENST00000435083 PDHBP11177 359 aa13.64□□□□□ -0.23
CHRNA1-207ENST00000435083 MRPL12P52815 198 aaKnown RBP13.64□□□□□ -0.23
CHRNA1-207ENST00000435083 ALX1Q15699 326 aa13.64□□□□□ -0.23
CHRNA1-207ENST00000435083 DNERQ8NFT8 737 aa13.64□□□□□ -0.23
CHRNA1-207ENST00000435083 TANC1Q9C0D5 1861 aa13.64□□□□□ -0.23
CHRNA1-207ENST00000435083 TLL1O43897 1013 aa13.63□□□□□ -0.23
CHRNA1-207ENST00000435083 FGAP02671 866 aa13.63□□□□□ -0.23
CHRNA1-207ENST00000435083 EDNRBP24530 442 aa13.63□□□□□ -0.23
CHRNA1-207ENST00000435083 KCNJ6P48051 423 aa13.63□□□□□ -0.23
CHRNA1-207ENST00000435083 ZNF543Q08ER8 600 aa13.63□□□□□ -0.23
CHRNA1-207ENST00000435083 GRB10Q13322 594 aa13.63□□□□□ -0.23
CHRNA1-207ENST00000435083 PTGISQ16647 500 aa13.63□□□□□ -0.23
CHRNA1-207ENST00000435083 USH1GQ495M9 461 aa13.63□□□□□ -0.23
CHRNA1-207ENST00000435083 CCDC155Q8N6L0 562 aa13.63□□□□□ -0.23
CHRNA1-207ENST00000435083 HLA-CQ95604 372 aa13.63□□□□□ -0.23
CHRNA1-207ENST00000435083 HELLSQ9NRZ9 838 aa13.63□□□□□ -0.23
CHRNA1-207ENST00000435083 TCP11L1Q9NUJ3 509 aa13.63□□□□□ -0.23
CHRNA1-207ENST00000435083 ZBTB47Q9UFB7 747 aaPredicted RBP13.63□□□□□ -0.23
CHRNA1-207ENST00000435083 PCDHB15Q9Y5E8 787 aa13.63□□□□□ -0.23
CHRNA1-207ENST00000435083 BAIAP3O94812 1187 aa13.62□□□□□ -0.23
CHRNA1-207ENST00000435083 ARIH2O95376 493 aa13.62□□□□□ -0.23
CHRNA1-207ENST00000435083 SPRED2Q7Z698 418 aa13.62□□□□□ -0.23
CHRNA1-207ENST00000435083 WDR19Q8NEZ3 1342 aa13.62□□□□□ -0.23
CHRNA1-207ENST00000435083 EVI5LQ96CN4 794 aa13.62□□□□□ -0.23
CHRNA1-207ENST00000435083 ZBED2Q9BTP6 218 aa13.62□□□□□ -0.23
CHRNA1-207ENST00000435083 EPHX3Q9H6B9 360 aa13.62□□□□□ -0.23
CHRNA1-207ENST00000435083 TRIP12Q14669 1992 aaPredicted RBP13.62□□□□□ -0.23
CHRNA1-207ENST00000435083 HAND2P61296 217 aa13.62□□□□□ -0.23
CHRNA1-207ENST00000435083 CHST3Q7LGC8 479 aa13.62□□□□□ -0.23
CHRNA1-207ENST00000435083 TMCO2Q7Z6W1 182 aaPredicted RBP13.62□□□□□ -0.23
CHRNA1-207ENST00000435083 AFG1LQ8WV93 481 aa13.62□□□□□ -0.23
CHRNA1-207ENST00000435083 TET1Q8NFU7 2136 aa13.61□□□□□ -0.23
CHRNA1-207ENST00000435083 GH1P01241 217 aa13.61□□□□□ -0.23
CHRNA1-207ENST00000435083 GOLGA8HP0CJ92 632 aa13.61□□□□□ -0.23
CHRNA1-207ENST00000435083 WDR5P61964 334 aaKnown RBP13.61□□□□□ -0.23
CHRNA1-207ENST00000435083 LY6KQ17RY6 165 aa13.61□□□□□ -0.23
CHRNA1-207ENST00000435083 ANKRD45Q5TZF3 282 aa13.61□□□□□ -0.23
CHRNA1-207ENST00000435083 GDF6Q6KF10 455 aaPredicted RBP13.61□□□□□ -0.23
CHRNA1-207ENST00000435083 SEPT14Q6ZU15 432 aa13.61□□□□□ -0.23
CHRNA1-207ENST00000435083 CAGE1Q8TC20 777 aa13.61□□□□□ -0.23
CHRNA1-207ENST00000435083 AFAP1L1Q8TED9 768 aa13.61□□□□□ -0.23
CHRNA1-207ENST00000435083 FAM227BQ96M60 508 aa13.61□□□□□ -0.23
CHRNA1-207ENST00000435083 TTC14Q96N46 770 aa13.61□□□□□ -0.23
CHRNA1-207ENST00000435083 LRFN3Q9BTN0 628 aa13.61□□□□□ -0.23
CHRNA1-207ENST00000435083 UBA5Q9GZZ9 404 aa13.61□□□□□ -0.23
CHRNA1-207ENST00000435083 NCOR1O75376 2440 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 PTPRSQ13332 1948 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 MUC3AQ02505 3323 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 SALL3Q9BXA9 1300 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 A0A0D9SFI3 127 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 LCHNA4D1U4 455 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 MMP3P08254 477 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 SELPP16109 830 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 MCMDC2Q4G0Z9 681 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 CCDC62Q6P9F0 684 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 MFSD6Q6ZSS7 791 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 LRRC8DQ7L1W4 858 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 RGS22Q8NE09 1264 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 TBC1D5Q92609 795 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 TAAR1Q96RJ0 339 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 CPVLQ9H3G5 476 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 CHD7Q9P2D1 2997 aa13.6□□□□□ -0.23
CHRNA1-207ENST00000435083 COL4A4P53420 1690 aaPredicted RBP13.59□□□□□ -0.23
CHRNA1-207ENST00000435083 LPXNO60711 386 aa13.59□□□□□ -0.23
CHRNA1-207ENST00000435083 SNHG28P0DPA3 235 aa13.59□□□□□ -0.23
CHRNA1-207ENST00000435083 HSPD1P10809 573 aaKnown RBP13.59□□□□□ -0.23
CHRNA1-207ENST00000435083 CASTP20810 708 aaKnown RBP13.59□□□□□ -0.23
CHRNA1-207ENST00000435083 DEFB103AP81534 67 aa13.59□□□□□ -0.23
CHRNA1-207ENST00000435083 ARHGAP1Q07960 439 aa13.59□□□□□ -0.23
CHRNA1-207ENST00000435083 GPNMBQ14956 572 aa13.59□□□□□ -0.23
CHRNA1-207ENST00000435083 CNKSR3Q6P9H4 555 aa13.59□□□□□ -0.23
CHRNA1-207ENST00000435083 GDPD5Q8WTR4 605 aa13.59□□□□□ -0.23
CHRNA1-207ENST00000435083 CTAGE1Q96RT6 745 aa13.59□□□□□ -0.23
CHRNA1-207ENST00000435083 ZKSCAN3Q9BRR0 538 aa13.59□□□□□ -0.23
CHRNA1-207ENST00000435083 MTUS1Q9ULD2 1270 aa13.59□□□□□ -0.23
CHRNA1-207ENST00000435083 NMIQ13287 307 aaPredicted RBP13.58□□□□□ -0.23
CHRNA1-207ENST00000435083 TMEM31Q5JXX7 168 aa13.58□□□□□ -0.23
CHRNA1-207ENST00000435083 GPATCH4Q5T3I0 446 aaKnown RBP13.58□□□□□ -0.23
CHRNA1-207ENST00000435083 SESTD1Q86VW0 696 aa13.58□□□□□ -0.23
CHRNA1-207ENST00000435083 NSUN6Q8TEA1 469 aaKnown RBP13.58□□□□□ -0.23
CHRNA1-207ENST00000435083 DHX38Q92620 1227 aaKnown RBP13.58□□□□□ -0.23
CHRNA1-207ENST00000435083 KAT2BQ92831 832 aa13.58□□□□□ -0.23
CHRNA1-207ENST00000435083 ALG1Q9BT22 464 aa13.58□□□□□ -0.23
CHRNA1-207ENST00000435083 HCN4Q9Y3Q4 1203 aa13.58□□□□□ -0.23
CHRNA1-207ENST00000435083 ABCB11O95342 1321 aa13.58□□□□□ -0.24
CHRNA1-207ENST00000435083 PARNO95453 639 aaKnown RBP13.58□□□□□ -0.24
CHRNA1-207ENST00000435083 CKBP12277 381 aa13.58□□□□□ -0.24
CHRNA1-207ENST00000435083 PDE1AP54750 535 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms