RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 STAMQ92783 540 aa13.42□□□□□ -0.26
CTCFL-209ENST00000433949 CUL5Q93034 780 aa13.42□□□□□ -0.26
CTCFL-209ENST00000433949 MTMR8Q96EF0 704 aa13.42□□□□□ -0.26
CTCFL-209ENST00000433949 NAP1L4Q99733 375 aaKnown RBP13.42□□□□□ -0.26
CTCFL-209ENST00000433949 GPCPD1Q9NPB8 672 aa13.42□□□□□ -0.26
CTCFL-209ENST00000433949 BIN2Q9UBW5 565 aaPredicted RBP13.42□□□□□ -0.26
CTCFL-209ENST00000433949 PITPNM2Q9BZ72 1349 aa13.42□□□□□ -0.26
CTCFL-209ENST00000433949 TMEM232C9JQI7 657 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 RIOK3O14730 519 aaKnown RBP13.41□□□□□ -0.26
CTCFL-209ENST00000433949 STX10O60499 249 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 CDC25AP30304 524 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 ECE1P42892 770 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 CCDC96Q2M329 555 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 TMEM266Q2M3C6 531 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 SUPT20HL1Q3ZLR7 823 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 JAKMIP3Q5VZ66 844 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 TMEM179Q6ZVK1 233 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 SIAH1Q8IUQ4 282 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 KIF18AQ8NI77 898 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 ZC3H15Q8WU90 426 aaKnown RBP13.41□□□□□ -0.26
CTCFL-209ENST00000433949 UBE2Q2Q8WVN8 375 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 CALML4Q96GE6 196 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 ZBTB21Q9ULJ3 1066 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 LRRC10BA6NIK2 292 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 USP27XA6NNY8 438 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 RHOBTB3O94955 611 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 HOXA7P31268 230 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-209ENST00000433949 FXR2P51116 673 aaKnown RBP eCLIP13.41□□□□□ -0.261e-6■■□□□ 13.1
CTCFL-209ENST00000433949 HSP90AA4PQ58FG1 418 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 DCAF15Q66K64 600 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 PPP4R3AQ6IN85 833 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 SPICE1Q8N0Z3 855 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 ACER1Q8TDN7 264 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 COA7Q96BR5 231 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 CDCA5Q96FF9 252 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 ADD3Q9UEY8 706 aaKnown RBP13.41□□□□□ -0.26
CTCFL-209ENST00000433949 CTNND2Q9UQB3 1225 aa13.41□□□□□ -0.26
CTCFL-209ENST00000433949 ZSCAN12O43309 604 aa13.4□□□□□ -0.26
CTCFL-209ENST00000433949 GCFC2P16383 781 aaKnown RBP13.4□□□□□ -0.26
CTCFL-209ENST00000433949 STX17P56962 302 aa13.4□□□□□ -0.26
CTCFL-209ENST00000433949 PDIA5Q14554 519 aa13.4□□□□□ -0.26
CTCFL-209ENST00000433949 CALCRLQ16602 461 aa13.4□□□□□ -0.26
CTCFL-209ENST00000433949 MCTP2Q6DN12 878 aa13.4□□□□□ -0.26
CTCFL-209ENST00000433949 APTXQ7Z2E3 356 aaKnown RBP13.4□□□□□ -0.26
CTCFL-209ENST00000433949 SMYD4Q8IYR2 804 aaPredicted RBP13.4□□□□□ -0.26
CTCFL-209ENST00000433949 ZNF341Q9BYN7 854 aa13.4□□□□□ -0.26
CTCFL-209ENST00000433949 TRMT1Q9NXH9 659 aaKnown RBP13.4□□□□□ -0.26
CTCFL-209ENST00000433949 SYNPO2Q9UMS6 1093 aa13.4□□□□□ -0.26
CTCFL-209ENST00000433949 A0A1W2PRG0 241 aa13.4□□□□□ -0.26
CTCFL-209ENST00000433949 GOLGA6L9A6NEM1 432 aa13.4□□□□□ -0.26
CTCFL-209ENST00000433949 CTIFO43310 598 aaKnown RBP13.4□□□□□ -0.26
CTCFL-209ENST00000433949 CLK2P49760 499 aaKnown RBP13.4□□□□□ -0.26
CTCFL-209ENST00000433949 MAP3K10Q02779 954 aa13.4□□□□□ -0.26
CTCFL-209ENST00000433949 SYCP1Q15431 976 aa13.4□□□□□ -0.26
CTCFL-209ENST00000433949 PPP1R13BQ96KQ4 1090 aa13.4□□□□□ -0.26
CTCFL-209ENST00000433949 MTMR9Q96QG7 549 aa13.4□□□□□ -0.26
CTCFL-209ENST00000433949 BAG1Q99933 345 aaPredicted RBP13.4□□□□□ -0.26
CTCFL-209ENST00000433949 STK17AQ9UEE5 414 aa13.4□□□□□ -0.26
CTCFL-209ENST00000433949 LIMA1Q9UHB6 759 aaKnown RBP13.4□□□□□ -0.26
CTCFL-209ENST00000433949 PPP2R3BQ9Y5P8 575 aa13.4□□□□□ -0.26
CTCFL-209ENST00000433949 ITIH6Q6UXX5 1313 aa13.39□□□□□ -0.27
CTCFL-209ENST00000433949 PP2D1A8MPX8 630 aa13.39□□□□□ -0.27
CTCFL-209ENST00000433949 PSMA7O14818 248 aa13.39□□□□□ -0.27
CTCFL-209ENST00000433949 USP2O75604 605 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-209ENST00000433949 PLCG1P19174 1290 aa13.39□□□□□ -0.27
CTCFL-209ENST00000433949 SLC1A4P43007 532 aa13.39□□□□□ -0.27
CTCFL-209ENST00000433949 DGKZQ13574 1117 aa13.39□□□□□ -0.27
CTCFL-209ENST00000433949 NELFBQ8WX92 580 aa13.39□□□□□ -0.27
CTCFL-209ENST00000433949 NAA15Q9BXJ9 866 aaKnown RBP13.39□□□□□ -0.27
CTCFL-209ENST00000433949 SSC5DA1L4H1 1573 aa13.39□□□□□ -0.27
CTCFL-209ENST00000433949 TECP42680 631 aa13.39□□□□□ -0.27
CTCFL-209ENST00000433949 PRCPP42785 496 aa13.39□□□□□ -0.27
CTCFL-209ENST00000433949 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-209ENST00000433949 ADSSL1Q8N142 457 aa13.39□□□□□ -0.27
CTCFL-209ENST00000433949 TC2NQ8N9U0 490 aa13.39□□□□□ -0.27
CTCFL-209ENST00000433949 GIMAP8Q8ND71 665 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-209ENST00000433949 KLRG1Q96E93 195 aa13.39□□□□□ -0.27
CTCFL-209ENST00000433949 PANX2Q96RD6 677 aa13.39□□□□□ -0.27
CTCFL-209ENST00000433949 NUP88Q99567 741 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-209ENST00000433949 C7orf25Q9BPX7 421 aa13.39□□□□□ -0.27
CTCFL-209ENST00000433949 KLRC4O43908 158 aa13.38□□□□□ -0.27
CTCFL-209ENST00000433949 PPP1R12BO60237 982 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-209ENST00000433949 CTNND1O60716 968 aaKnown RBP13.38□□□□□ -0.27
CTCFL-209ENST00000433949 ASNSP08243 561 aa13.38□□□□□ -0.27
CTCFL-209ENST00000433949 TPM1P09493 284 aa13.38□□□□□ -0.27
CTCFL-209ENST00000433949 PBX1P40424 430 aa13.38□□□□□ -0.27
CTCFL-209ENST00000433949 KMT5BQ4FZB7 885 aa13.38□□□□□ -0.27
CTCFL-209ENST00000433949 KCTD1Q719H9 257 aa13.38□□□□□ -0.27
CTCFL-209ENST00000433949 PPFIBP1Q86W92 1011 aa13.38□□□□□ -0.27
CTCFL-209ENST00000433949 TMEM139Q8IV31 216 aa13.38□□□□□ -0.27
CTCFL-209ENST00000433949 GMCL1P1Q8NEA9 526 aa13.38□□□□□ -0.27
CTCFL-209ENST00000433949 NOC3LQ8WTT2 800 aaKnown RBP13.38□□□□□ -0.27
CTCFL-209ENST00000433949 HOOK2Q96ED9 719 aa13.38□□□□□ -0.27
CTCFL-209ENST00000433949 DHTKD1Q96HY7 919 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-209ENST00000433949 TRIM9Q9C026 710 aa13.38□□□□□ -0.27
CTCFL-209ENST00000433949 LRRC27Q9C0I9 530 aa13.38□□□□□ -0.27
CTCFL-209ENST00000433949 PSTPIP2Q9H939 334 aa13.38□□□□□ -0.27
CTCFL-209ENST00000433949 TMEM260Q9NX78 707 aa13.38□□□□□ -0.27
CTCFL-209ENST00000433949 LRWD1Q9UFC0 647 aa13.38□□□□□ -0.27
CTCFL-209ENST00000433949 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.38□□□□□ -0.271e-7■■□□□ 12.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms