RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 SH3RF1Q7Z6J0 888 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 SYTL5Q8TDW5 730 aaPredicted RBP10.59□□□□□ -0.71
HDAC9-211ENST00000430454 TMEM87BQ96K49 555 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 MAP3K14Q99558 947 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 SEC63Q9UGP8 760 aaKnown RBP10.59□□□□□ -0.71
HDAC9-211ENST00000430454 TBX21Q9UL17 535 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 PCDHA1Q9Y5I3 950 aa10.59□□□□□ -0.71
HDAC9-211ENST00000430454 RBM8AQ9Y5S9 174 aaKnown RBP10.59□□□□□ -0.71
HDAC9-211ENST00000430454 ASTN1O14525 1302 aa10.58□□□□□ -0.71
HDAC9-211ENST00000430454 PNMA6FA0A0J9YX94 578 aa10.58□□□□□ -0.72
HDAC9-211ENST00000430454 CCDC69A6NI79 296 aa10.58□□□□□ -0.72
HDAC9-211ENST00000430454 GCOM1H8Y6P7 765 aaPredicted RBP10.58□□□□□ -0.72
HDAC9-211ENST00000430454 CTAGE5O15320 804 aa10.58□□□□□ -0.72
HDAC9-211ENST00000430454 DDAH1O94760 285 aa10.58□□□□□ -0.72
HDAC9-211ENST00000430454 CFBP00751 764 aa10.58□□□□□ -0.72
HDAC9-211ENST00000430454 GH1P01241 217 aa10.58□□□□□ -0.72
HDAC9-211ENST00000430454 MYL3P08590 195 aa10.58□□□□□ -0.72
HDAC9-211ENST00000430454 POLR2MP0CAP2 368 aa10.58□□□□□ -0.72
HDAC9-211ENST00000430454 SMARCA1P28370 1054 aa10.58□□□□□ -0.72
HDAC9-211ENST00000430454 PTPN11Q06124 597 aaPredicted RBP10.58□□□□□ -0.72
HDAC9-211ENST00000430454 FAM126BQ8IXS8 530 aa10.58□□□□□ -0.72
HDAC9-211ENST00000430454 RPUSD2Q8IZ73 545 aaKnown RBP10.58□□□□□ -0.72
HDAC9-211ENST00000430454 SLC43A3Q8NBI5 491 aa10.58□□□□□ -0.72
HDAC9-211ENST00000430454 CUL5Q93034 780 aa10.58□□□□□ -0.72
HDAC9-211ENST00000430454 PURBQ96QR8 312 aaKnown RBP10.58□□□□□ -0.72
HDAC9-211ENST00000430454 CPVLQ9H3G5 476 aa10.58□□□□□ -0.72
HDAC9-211ENST00000430454 ANO2Q9NQ90 1003 aa10.58□□□□□ -0.72
HDAC9-211ENST00000430454 MAD2L2Q9UI95 211 aa10.58□□□□□ -0.72
HDAC9-211ENST00000430454 TMEM265A0A087WTH1 108 aa10.57□□□□□ -0.72
HDAC9-211ENST00000430454 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.57□□□□□ -0.72
HDAC9-211ENST00000430454 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.57□□□□□ -0.72
HDAC9-211ENST00000430454 A6NJR5 290 aa10.57□□□□□ -0.72
HDAC9-211ENST00000430454 CASTP20810 708 aaKnown RBP10.57□□□□□ -0.72
HDAC9-211ENST00000430454 LAMC2Q13753 1193 aa10.57□□□□□ -0.72
HDAC9-211ENST00000430454 SEPT14Q6ZU15 432 aa10.57□□□□□ -0.72
HDAC9-211ENST00000430454 HOMER1Q86YM7 354 aa10.57□□□□□ -0.72
HDAC9-211ENST00000430454 CCDC155Q8N6L0 562 aa10.57□□□□□ -0.72
HDAC9-211ENST00000430454 MTMR8Q96EF0 704 aa10.57□□□□□ -0.72
HDAC9-211ENST00000430454 RRP36Q96EU6 259 aaKnown RBP10.57□□□□□ -0.72
HDAC9-211ENST00000430454 ESYT1Q9BSJ8 1104 aa10.57□□□□□ -0.72
HDAC9-211ENST00000430454 HIPK3Q9H422 1215 aa10.57□□□□□ -0.72
HDAC9-211ENST00000430454 NOD1Q9Y239 953 aa10.57□□□□□ -0.72
HDAC9-211ENST00000430454 STXBP5LQ9Y2K9 1186 aa10.57□□□□□ -0.72
HDAC9-211ENST00000430454 MCM3APO60318 1980 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 PRC1O43663 620 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 STAM2O75886 525 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 CD4P01730 458 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 NEFLP07196 543 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 NR3C2P08235 984 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 PFKMP08237 780 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 CCND2P30279 289 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 HSD17B4P51659 736 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 PURAQ00577 322 aaKnown RBP10.56□□□□□ -0.72
HDAC9-211ENST00000430454 GHRHRQ02643 423 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 TROAPQ12815 778 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 KRT32Q14532 448 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 GNPTABQ3T906 1256 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 FAM47CQ5HY64 1035 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 NFRKBQ6P4R8 1299 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 MB21D2Q8IYB1 491 aaPredicted RBP10.56□□□□□ -0.72
HDAC9-211ENST00000430454 STAG2Q8N3U4 1231 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 RETREG2Q8NC44 543 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 TAAR1Q96RJ0 339 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 KATNAL1Q9BW62 490 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 PPP1R12CQ9BZL4 782 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 IL25Q9H293 177 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 RIOX1Q9H6W3 641 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 PXMP2Q9NR77 195 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 SLC12A7Q9Y666 1083 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 MRVI1Q9Y6F6 885 aa10.56□□□□□ -0.72
HDAC9-211ENST00000430454 CDC45O75419 566 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 FGBP02675 491 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 HMGB1P09429 215 aaKnown RBP10.55□□□□□ -0.72
HDAC9-211ENST00000430454 TGFB3P10600 412 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 EIF2AK2P19525 551 aaKnown RBP10.55□□□□□ -0.72
HDAC9-211ENST00000430454 RFC2P35250 354 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 LIFRP42702 1097 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 BFSP2Q13515 415 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 DGKDQ16760 1214 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 C9orf50Q5SZB4 431 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 CREB3L3Q68CJ9 461 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 XRRA1Q6P2D8 792 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 STOX1Q6ZVD7 989 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 CHST3Q7LGC8 479 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 DHX37Q8IY37 1157 aaKnown RBP10.55□□□□□ -0.72
HDAC9-211ENST00000430454 ZNF654Q8IZM8 581 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 IGDCC4Q8TDY8 1250 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 CCDC136Q96JN2 1154 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 PIGSQ96S52 555 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 SPZ1Q9BXG8 430 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 ALDH8A1Q9H2A2 487 aaPredicted RBP10.55□□□□□ -0.72
HDAC9-211ENST00000430454 IL23AQ9NPF7 189 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 MTMR10Q9NXD2 777 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 GTF3C3Q9Y5Q9 886 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 DDX49Q9Y6V7 483 aaKnown RBP10.55□□□□□ -0.72
HDAC9-211ENST00000430454 LTBP2Q14767 1821 aa10.55□□□□□ -0.72
HDAC9-211ENST00000430454 SLC27A2O14975 620 aa10.54□□□□□ -0.72
HDAC9-211ENST00000430454 B4GALT4O60513 344 aa10.54□□□□□ -0.72
HDAC9-211ENST00000430454 MYCLP12524 364 aaPredicted RBP10.54□□□□□ -0.72
HDAC9-211ENST00000430454 ACTN1P12814 892 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms