RNA–Protein interactions for RNA: ENST00000430117.6

CALCOCO1-202, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5 BASIC

Gene CALCOCO1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-202ENST00000430117 UBXN1Q04323 297 aa12.06□□□□□ -0.48
CALCOCO1-202ENST00000430117 MKRN4PQ13434 485 aaPredicted RBP12.06□□□□□ -0.48
CALCOCO1-202ENST00000430117 KRT31Q15323 416 aa12.06□□□□□ -0.48
CALCOCO1-202ENST00000430117 P3H1Q32P28 736 aa12.06□□□□□ -0.48
CALCOCO1-202ENST00000430117 CCDC38Q502W7 563 aa12.06□□□□□ -0.48
CALCOCO1-202ENST00000430117 HDGFL1Q5TGJ6 251 aa12.06□□□□□ -0.48
CALCOCO1-202ENST00000430117 RASIP1Q5U651 963 aa12.06□□□□□ -0.48
CALCOCO1-202ENST00000430117 PTF1AQ7RTS3 328 aa12.06□□□□□ -0.48
CALCOCO1-202ENST00000430117 KRT26Q7Z3Y9 468 aa12.06□□□□□ -0.48
CALCOCO1-202ENST00000430117 ABTB1Q969K4 478 aaPredicted RBP12.06□□□□□ -0.48
CALCOCO1-202ENST00000430117 RANBP17Q9H2T7 1088 aaKnown RBP12.06□□□□□ -0.48
CALCOCO1-202ENST00000430117 KCNMB3Q9NPA1 279 aa12.06□□□□□ -0.48
CALCOCO1-202ENST00000430117 ORC4O43929 436 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 GFPT2O94808 682 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 MOCS3O95396 460 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 ALADP13716 330 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 ETS2P15036 469 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 MTHFSDQ2M296 383 aaKnown RBP12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 RNF168Q8IYW5 571 aaPredicted RBP12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 ANKRD13CQ8N6S4 541 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 UBLCP1Q8WVY7 318 aaPredicted RBP12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 STAMQ92783 540 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 ATXN10Q9UBB4 475 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 CHMP2BQ9UQN3 213 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 KDM6AO15550 1401 aaPredicted RBP12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 PIK3C2AO00443 1686 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 IFNAR2P48551 515 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 SESN3P58005 492 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 TAF7Q15545 349 aaPredicted RBP12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 IFI16Q16666 785 aaKnown RBP12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 PABPC1LQ4VXU2 614 aaKnown RBP12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 DDX46Q7L014 1031 aaKnown RBP12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 FBF1Q8TES7 1133 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 CASKIN2Q8WXE0 1202 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 CTAGE1Q96RT6 745 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 SELENOSQ9BQE4 189 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 TRIM7Q9C029 511 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 MTFR1LQ9H019 292 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 SPATA7Q9P0W8 599 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 LRWD1Q9UFC0 647 aa12.05□□□□□ -0.48
CALCOCO1-202ENST00000430117 USP42Q9H9J4 1324 aaKnown RBP12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 RARAP10276 462 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 NAT1P18440 290 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 KIF5AQ12840 1032 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 CUL4BQ13620 913 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 VPS37DQ86XT2 251 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 PALB2Q86YC2 1186 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 LINS1Q8NG48 757 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 KRT12Q99456 494 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 DDX23Q9BUQ8 820 aaKnown RBP12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 VCXQ9H320 206 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 LRRC4CQ9HCJ2 640 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 NLRP2Q9NX02 1062 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 SAMD15Q9P1V8 674 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 CTNND2Q9UQB3 1225 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 MED23Q9ULK4 1368 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 FLOT1O75955 427 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 HSD17B3P37058 310 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 CCNFP41002 786 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 KRT83P78385 493 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 SETDB1Q15047 1291 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 LCA5Q86VQ0 697 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 LRRC34Q8IZ02 419 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 LTV1Q96GA3 475 aaPredicted RBP12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 PNMA3Q9UL41 463 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 LUC7L2Q9Y383 392 aaKnown RBP12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 RGPD1P0DJD0 1748 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 ARHGEF10O15013 1369 aa12.04□□□□□ -0.48
CALCOCO1-202ENST00000430117 IFIT3O14879 490 aaKnown RBP12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 CETN3O15182 167 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 HNRNPCP07910 306 aaKnown RBP eCLIP12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 GSTA1P08263 222 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 RXRAP19793 462 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 ZNF844Q08AG5 666 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 USP49Q70CQ1 688 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 DDX42Q86XP3 938 aaKnown RBP eCLIP12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 CD302Q8IX05 232 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 KLHL7Q8IXQ5 586 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 C17orf50Q8WW18 174 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 DDX27Q96GQ7 796 aaKnown RBP12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 SMIM23A6NLE4 172 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 SRRM3A6NNA2 597 aaPredicted RBP12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 SPATA31D3P0C874 917 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 FECHP22830 423 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 HOXC9P31274 260 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 MCL1Q07820 350 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 CBX3Q13185 183 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 PTPAQ15257 358 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 HLFQ16534 295 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 KRT71Q3SY84 523 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 USPL1Q5W0Q7 1092 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 BICDL1Q6ZP65 573 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 SPATA31D4Q6ZUB0 917 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 EEF2KMTQ96G04 330 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 XPO6Q96QU8 1125 aaKnown RBP12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 FMN2Q9NZ56 1722 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 CHD2O14647 1828 aaKnown RBP12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 IGSF1Q8N6C5 1336 aa12.03□□□□□ -0.48
CALCOCO1-202ENST00000430117 GOLGA6L10A0A0M3HER8 536 aa12.02□□□□□ -0.48
CALCOCO1-202ENST00000430117 ANO9A1A5B4 782 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms