RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 MYO9BQ13459 2157 aa17.41■□□□□ 0.38
MSH5-208ENST00000429846 A6NJR5 290 aa17.41■□□□□ 0.38
MSH5-208ENST00000429846 GRXCR1A8MXD5 290 aa17.41■□□□□ 0.38
MSH5-208ENST00000429846 B4E1Z4 1266 aa17.41■□□□□ 0.38
MSH5-208ENST00000429846 MYL3P08590 195 aa17.41■□□□□ 0.38
MSH5-208ENST00000429846 PBX2P40425 430 aa17.41■□□□□ 0.38
MSH5-208ENST00000429846 NFRKBQ6P4R8 1299 aa17.41■□□□□ 0.38
MSH5-208ENST00000429846 MCF2L2Q86YR7 1114 aa17.41■□□□□ 0.38
MSH5-208ENST00000429846 UBA5Q9GZZ9 404 aa17.41■□□□□ 0.38
MSH5-208ENST00000429846 CXXC1Q9P0U4 656 aaPredicted RBP17.41■□□□□ 0.38
MSH5-208ENST00000429846 TXNP10599 105 aaKnown RBP17.4■□□□□ 0.38
MSH5-208ENST00000429846 PTPN11Q06124 597 aaPredicted RBP17.4■□□□□ 0.38
MSH5-208ENST00000429846 OTOP2Q7RTS6 562 aa17.4■□□□□ 0.38
MSH5-208ENST00000429846 ADGRF4Q8IZF3 695 aa17.4■□□□□ 0.38
MSH5-208ENST00000429846 ENAHQ8N8S7 591 aaPredicted RBP17.4■□□□□ 0.38
MSH5-208ENST00000429846 NSUN6Q8TEA1 469 aaKnown RBP17.4■□□□□ 0.38
MSH5-208ENST00000429846 TRMT13Q9NUP7 481 aaKnown RBP17.4■□□□□ 0.38
MSH5-208ENST00000429846 EYSQ5T1H1 3165 aa17.4■□□□□ 0.38
MSH5-208ENST00000429846 PITPNM1O00562 1244 aa17.39■□□□□ 0.37
MSH5-208ENST00000429846 PARP1P09874 1014 aaKnown RBP17.39■□□□□ 0.37
MSH5-208ENST00000429846 RFC2P35250 354 aa17.39■□□□□ 0.37
MSH5-208ENST00000429846 SYMPKQ92797 1274 aaKnown RBP17.39■□□□□ 0.37
MSH5-208ENST00000429846 IWS1Q96ST2 819 aa17.39■□□□□ 0.37
MSH5-208ENST00000429846 UBAC1Q9BSL1 405 aa17.39■□□□□ 0.37
MSH5-208ENST00000429846 CPVLQ9H3G5 476 aa17.39■□□□□ 0.37
MSH5-208ENST00000429846 SLC28A3Q9HAS3 691 aa17.39■□□□□ 0.37
MSH5-208ENST00000429846 ZSWIM5Q9P217 1185 aa17.39■□□□□ 0.37
MSH5-208ENST00000429846 MRPL11Q9Y3B7 192 aaKnown RBP17.39■□□□□ 0.37
MSH5-208ENST00000429846 CYP2C9P11712 490 aa17.38■□□□□ 0.37
MSH5-208ENST00000429846 QRICH1Q2TAL8 776 aa17.38■□□□□ 0.37
MSH5-208ENST00000429846 NBPF20Q3BBV1 942 aa17.38■□□□□ 0.37
MSH5-208ENST00000429846 FAM47CQ5HY64 1035 aa17.38■□□□□ 0.37
MSH5-208ENST00000429846 EXOC6Q8TAG9 804 aa17.38■□□□□ 0.37
MSH5-208ENST00000429846 SYTL5Q8TDW5 730 aaPredicted RBP17.38■□□□□ 0.37
MSH5-208ENST00000429846 SCLYQ96I15 445 aa17.38■□□□□ 0.37
MSH5-208ENST00000429846 YTHDC1Q96MU7 727 aaKnown RBP17.38■□□□□ 0.37
MSH5-208ENST00000429846 SLC4A7Q9Y6M7 1214 aa17.38■□□□□ 0.37
MSH5-208ENST00000429846 SCN5AQ14524 2016 aa17.38■□□□□ 0.37
MSH5-208ENST00000429846 DHX16O60231 1041 aaKnown RBP17.37■□□□□ 0.37
MSH5-208ENST00000429846 ARIH2O95376 493 aa17.37■□□□□ 0.37
MSH5-208ENST00000429846 ACTN1P12814 892 aa17.37■□□□□ 0.37
MSH5-208ENST00000429846 STXBP2Q15833 593 aa17.37■□□□□ 0.37
MSH5-208ENST00000429846 IFIT1BQ5T764 474 aaKnown RBP17.37■□□□□ 0.37
MSH5-208ENST00000429846 CCDC62Q6P9F0 684 aa17.37■□□□□ 0.37
MSH5-208ENST00000429846 FBXO11Q86XK2 927 aa17.37■□□□□ 0.37
MSH5-208ENST00000429846 COPS5Q92905 334 aa17.37■□□□□ 0.37
MSH5-208ENST00000429846 PRDM12Q9H4Q4 367 aa17.37■□□□□ 0.37
MSH5-208ENST00000429846 ZBBXA8MT70 800 aa17.36■□□□□ 0.37
MSH5-208ENST00000429846 GH1P01241 217 aa17.36■□□□□ 0.37
MSH5-208ENST00000429846 ATP2A2P16615 1042 aaKnown RBP17.36■□□□□ 0.37
MSH5-208ENST00000429846 BFSP2Q13515 415 aa17.36■□□□□ 0.37
MSH5-208ENST00000429846 VWCEQ96DN2 955 aa17.36■□□□□ 0.37
MSH5-208ENST00000429846 RMDN3Q96TC7 470 aa17.36■□□□□ 0.37
MSH5-208ENST00000429846 AMNQ9BXJ7 453 aa17.36■□□□□ 0.37
MSH5-208ENST00000429846 NKX2-4Q9H2Z4 354 aa17.36■□□□□ 0.37
MSH5-208ENST00000429846 JMJD4Q9H9V9 463 aa17.36■□□□□ 0.37
MSH5-208ENST00000429846 MAP3K20Q9NYL2 800 aaKnown RBP17.36■□□□□ 0.37
MSH5-208ENST00000429846 PCDHA11Q9Y5I1 949 aa17.36■□□□□ 0.37
MSH5-208ENST00000429846 PRUNE2Q8WUY3 3088 aa17.35■□□□□ 0.37
MSH5-208ENST00000429846 MMP3P08254 477 aa17.35■□□□□ 0.37
MSH5-208ENST00000429846 GHRHRQ02643 423 aa17.35■□□□□ 0.37
MSH5-208ENST00000429846 ARHGEF16Q5VV41 709 aa17.35■□□□□ 0.37
MSH5-208ENST00000429846 SESTD1Q86VW0 696 aa17.35■□□□□ 0.37
MSH5-208ENST00000429846 SAMD3Q8N6K7 520 aa17.35■□□□□ 0.37
MSH5-208ENST00000429846 CCDC155Q8N6L0 562 aa17.35■□□□□ 0.37
MSH5-208ENST00000429846 USP38Q8NB14 1042 aa17.35■□□□□ 0.37
MSH5-208ENST00000429846 RETREG2Q8NC44 543 aa17.35■□□□□ 0.37
MSH5-208ENST00000429846 TBC1D5Q92609 795 aa17.35■□□□□ 0.37
MSH5-208ENST00000429846 TAAR1Q96RJ0 339 aa17.35■□□□□ 0.37
MSH5-208ENST00000429846 COL20A1Q9P218 1284 aa17.35■□□□□ 0.37
MSH5-208ENST00000429846 NOD1Q9Y239 953 aa17.35■□□□□ 0.37
MSH5-208ENST00000429846 YBX2Q9Y2T7 364 aaKnown RBP17.35■□□□□ 0.37
MSH5-208ENST00000429846 IQCF3P0C7M6 154 aa17.34■□□□□ 0.37
MSH5-208ENST00000429846 ARHGAP1Q07960 439 aa17.34■□□□□ 0.37
MSH5-208ENST00000429846 TRDNQ13061 729 aa17.34■□□□□ 0.37
MSH5-208ENST00000429846 TRAF1Q13077 416 aa17.34■□□□□ 0.37
MSH5-208ENST00000429846 SEC23AQ15436 765 aa17.34■□□□□ 0.37
MSH5-208ENST00000429846 TJAP1Q5JTD0 557 aa17.34■□□□□ 0.37
MSH5-208ENST00000429846 PPP2R2DQ66LE6 453 aa17.34■□□□□ 0.37
MSH5-208ENST00000429846 SEPT14Q6ZU15 432 aa17.34■□□□□ 0.37
MSH5-208ENST00000429846 DEFB128Q7Z7B8 93 aa17.34■□□□□ 0.37
MSH5-208ENST00000429846 CAGE1Q8TC20 777 aa17.34■□□□□ 0.37
MSH5-208ENST00000429846 AFG1LQ8WV93 481 aa17.34■□□□□ 0.37
MSH5-208ENST00000429846 EMID1Q96A84 441 aaPredicted RBP17.34■□□□□ 0.37
MSH5-208ENST00000429846 TTC28Q96AY4 2481 aa17.34■□□□□ 0.37
MSH5-208ENST00000429846 SLC9A7Q96T83 725 aa17.34■□□□□ 0.37
MSH5-208ENST00000429846 CHD9Q3L8U1 2897 aa17.34■□□□□ 0.37
MSH5-208ENST00000429846 TRIP12Q14669 1992 aaPredicted RBP17.33■□□□□ 0.37
MSH5-208ENST00000429846 KLRF2D3W0D1 207 aa17.33■□□□□ 0.36
MSH5-208ENST00000429846 ZBTB5O15062 677 aa17.33■□□□□ 0.36
MSH5-208ENST00000429846 EIF3JO75822 258 aaKnown RBP17.33■□□□□ 0.36
MSH5-208ENST00000429846 CFBP00751 764 aa17.33■□□□□ 0.36
MSH5-208ENST00000429846 EIF2AK2P19525 551 aaKnown RBP17.33■□□□□ 0.36
MSH5-208ENST00000429846 CASTP20810 708 aaKnown RBP17.33■□□□□ 0.36
MSH5-208ENST00000429846 HSD17B4P51659 736 aa17.33■□□□□ 0.36
MSH5-208ENST00000429846 DGKDQ16760 1214 aa17.33■□□□□ 0.36
MSH5-208ENST00000429846 LY6KQ17RY6 165 aa17.33■□□□□ 0.36
MSH5-208ENST00000429846 TTC22Q5TAA0 569 aa17.33■□□□□ 0.36
MSH5-208ENST00000429846 PHOSPHO2Q8TCD6 241 aa17.33■□□□□ 0.36
MSH5-208ENST00000429846 RUFY2Q8WXA3 655 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms