RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 CCDC17Q96LX7 622 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 KIF9Q9HAQ2 790 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 KMT5AQ9NQR1 393 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 KIAA1468Q9P260 1216 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 PCDHA4Q9UN74 947 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 PCDHB4Q9Y5E5 795 aa10.69□□□□□ -0.7
SNX13-203ENST00000428135 GOLGA8IPA6NC78 632 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 CCDC160A6NGH7 325 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 GOLGA8JA6NMD2 632 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 TLR3O15455 904 aaKnown RBP10.68□□□□□ -0.7
SNX13-203ENST00000428135 PLEKHA8P1O95397 391 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 USP14P54578 494 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 CLUL1Q15846 466 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 ASPRV1Q53RT3 343 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 KRT26Q7Z3Y9 468 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 CTAGE3PQ8IX95 158 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 MXD3Q9BW11 206 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 CCND2P30279 289 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 GUCY2FP51841 1108 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 ITPK1Q13572 414 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 PSMD6Q15008 389 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 FAM26FQ5R3K3 315 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 FMNL3Q8IVF7 1028 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 LARSQ9P2J5 1176 aaKnown RBP10.68□□□□□ -0.7
SNX13-203ENST00000428135 POLIQ9UNA4 740 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 KCNK3O14649 394 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 GPSM2P81274 684 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 SLC15A2Q16348 729 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 MICAL1Q8TDZ2 1067 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 RSAD2Q8WXG1 361 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 TM6SF1Q9BZW5 370 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 BSDC1Q9NW68 430 aaPredicted RBP10.68□□□□□ -0.7
SNX13-203ENST00000428135 COL4A3BPQ9Y5P4 624 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 DDIT3P35638 169 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 KIAA1841Q6NSI8 718 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 MIS18BP1Q6P0N0 1132 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 SLC7A3Q8WY07 619 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 OTUD5Q96G74 571 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 NKIRAS1Q9NYS0 192 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 HESX1Q9UBX0 185 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 IQGAP3Q86VI3 1631 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 ZBTB24O43167 697 aaPredicted RBP10.68□□□□□ -0.7
SNX13-203ENST00000428135 TPD52P55327 224 aaPredicted RBP10.68□□□□□ -0.7
SNX13-203ENST00000428135 RYBPQ8N488 228 aaPredicted RBP10.68□□□□□ -0.7
SNX13-203ENST00000428135 NAP1L3Q99457 506 aaPredicted RBP10.68□□□□□ -0.7
SNX13-203ENST00000428135 MINPP1Q9UNW1 487 aa10.68□□□□□ -0.7
SNX13-203ENST00000428135 BNIP3LO60238 219 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 PDE6CP51160 858 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 GPATCH4Q5T3I0 446 aaKnown RBP10.67□□□□□ -0.7
SNX13-203ENST00000428135 ANKS4BQ8N8V4 417 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 SKA2Q8WVK7 121 aaPredicted RBP10.67□□□□□ -0.7
SNX13-203ENST00000428135 IQSEC2Q5JU85 1478 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 CEP170BQ9Y4F5 1589 aaPredicted RBP10.67□□□□□ -0.7
SNX13-203ENST00000428135 CD58P19256 250 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 MAP4K1Q92918 833 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 FAM149B1Q96BN6 582 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 TTBK2Q6IQ55 1244 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 KRBA2Q6ZNG9 492 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 DCLK2Q8N568 766 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 PPRC1Q5VV67 1664 aaKnown RBP10.67□□□□□ -0.7
SNX13-203ENST00000428135 PTPRUQ92729 1446 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 GBP6Q6ZN66 633 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 CARMIL3Q8ND23 1372 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 GOLGA6CA6NDK9 693 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 GOLGA6BA6NDN3 693 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 USP17L5A8MUK1 530 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 ACTN4O43707 911 aaKnown RBP10.67□□□□□ -0.7
SNX13-203ENST00000428135 GOLGA6DP0CG33 693 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 PDXDC2PQ6P474 469 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 COA1Q9GZY4 146 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 GOLGA6AQ9NYA3 693 aa10.67□□□□□ -0.7
SNX13-203ENST00000428135 GOLGA8SH3BPF8 625 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 BRD1O95696 1058 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 ELF2Q15723 593 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 RSRC2Q7L4I2 434 aaKnown RBP10.66□□□□□ -0.7
SNX13-203ENST00000428135 TTC30AQ86WT1 665 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 PIGOQ8TEQ8 1089 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 ATP10DQ9P241 1426 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 ARHGEF40Q8TER5 1519 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 THAP12O43422 761 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 CD2BP2O95400 341 aaKnown RBP10.66□□□□□ -0.7
SNX13-203ENST00000428135 LARGE1O95461 756 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 KRT15P19012 456 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 MYL7Q01449 175 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 CCDC121Q6ZUS5 278 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 PRPF38AQ8NAV1 312 aaKnown RBP10.66□□□□□ -0.7
SNX13-203ENST00000428135 DPH5Q9H2P9 285 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 ADD3Q9UEY8 706 aaKnown RBP10.66□□□□□ -0.7
SNX13-203ENST00000428135 BUB1BO60566 1050 aaPredicted RBP10.66□□□□□ -0.7
SNX13-203ENST00000428135 ZSCAN20P17040 1043 aaPredicted RBP10.66□□□□□ -0.7
SNX13-203ENST00000428135 INPP5FQ9Y2H2 1132 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 SSH2Q76I76 1423 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 E9PCH4 1651 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 TULP4Q9NRJ4 1543 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 GIPC1O14908 333 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 SEPT2Q15019 361 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 TMTC1Q8IUR5 882 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 TTC14Q96N46 770 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 IWS1Q96ST2 819 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 PTPN22Q9Y2R2 807 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms