RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 TDHQ8IZJ6 230 aa23.93■■□□□ 1.42
HSPG2-205ENST00000427897 LRRC2Q9BYS8 371 aa23.93■■□□□ 1.42
HSPG2-205ENST00000427897 LRRC37A2A6NM11 1700 aa23.93■■□□□ 1.42
HSPG2-205ENST00000427897 NKRFO15226 690 aaKnown RBP eCLIP23.92■■□□□ 1.42
HSPG2-205ENST00000427897 TXNP10599 105 aaKnown RBP23.92■■□□□ 1.42
HSPG2-205ENST00000427897 RAG1P15918 1043 aa23.92■■□□□ 1.42
HSPG2-205ENST00000427897 EIF2AK2P19525 551 aaKnown RBP23.92■■□□□ 1.42
HSPG2-205ENST00000427897 CPT1AP50416 773 aa23.92■■□□□ 1.42
HSPG2-205ENST00000427897 TTLL4Q14679 1199 aa23.92■■□□□ 1.42
HSPG2-205ENST00000427897 SAMD3Q8N6K7 520 aa23.92■■□□□ 1.42
HSPG2-205ENST00000427897 PDLIM7Q9NR12 457 aa23.92■■□□□ 1.42
HSPG2-205ENST00000427897 PCDH10Q9P2E7 1040 aa23.92■■□□□ 1.42
HSPG2-205ENST00000427897 RBM47A0AV96 593 aaKnown RBP23.91■■□□□ 1.42
HSPG2-205ENST00000427897 GCOM1H8Y6P7 765 aaPredicted RBP23.91■■□□□ 1.42
HSPG2-205ENST00000427897 ARVCFO00192 962 aa23.91■■□□□ 1.42
HSPG2-205ENST00000427897 PPP1R11O60927 126 aaPredicted RBP23.91■■□□□ 1.42
HSPG2-205ENST00000427897 POLR2MP0CAP2 368 aa23.91■■□□□ 1.42
HSPG2-205ENST00000427897 EDNRBP24530 442 aa23.91■■□□□ 1.42
HSPG2-205ENST00000427897 NKX3-2P78367 333 aa23.91■■□□□ 1.42
HSPG2-205ENST00000427897 TMEM63BQ5T3F8 832 aa23.91■■□□□ 1.42
HSPG2-205ENST00000427897 SEPT14Q6ZU15 432 aa23.91■■□□□ 1.42
HSPG2-205ENST00000427897 TOX2Q96NM4 488 aa23.91■■□□□ 1.42
HSPG2-205ENST00000427897 POLR3EQ9NVU0 708 aa23.91■■□□□ 1.42
HSPG2-205ENST00000427897 CEP290O15078 2479 aa23.91■■□□□ 1.42
HSPG2-205ENST00000427897 CTAGE5O15320 804 aa23.9■■□□□ 1.42
HSPG2-205ENST00000427897 CYTH3O43739 400 aa23.9■■□□□ 1.42
HSPG2-205ENST00000427897 REC8O95072 547 aa23.9■■□□□ 1.42
HSPG2-205ENST00000427897 MYL3P08590 195 aa23.9■■□□□ 1.42
HSPG2-205ENST00000427897 HMGB1P09429 215 aaKnown RBP23.9■■□□□ 1.42
HSPG2-205ENST00000427897 MYCLP12524 364 aaPredicted RBP23.9■■□□□ 1.42
HSPG2-205ENST00000427897 RXRAP19793 462 aa23.9■■□□□ 1.42
HSPG2-205ENST00000427897 PTGS1P23219 599 aa23.9■■□□□ 1.42
HSPG2-205ENST00000427897 HSD17B4P51659 736 aa23.9■■□□□ 1.42
HSPG2-205ENST00000427897 DHX32Q7L7V1 743 aaKnown RBP23.9■■□□□ 1.42
HSPG2-205ENST00000427897 ANKRD33Q7Z3H0 272 aa23.9■■□□□ 1.42
HSPG2-205ENST00000427897 SH3RF1Q7Z6J0 888 aa23.9■■□□□ 1.42
HSPG2-205ENST00000427897 BADQ92934 168 aa23.9■■□□□ 1.42
HSPG2-205ENST00000427897 PXMP2Q9NR77 195 aa23.9■■□□□ 1.42
HSPG2-205ENST00000427897 COL20A1Q9P218 1284 aa23.9■■□□□ 1.42
HSPG2-205ENST00000427897 NAP1L2Q9ULW6 460 aaPredicted RBP23.9■■□□□ 1.42
HSPG2-205ENST00000427897 DNAH12Q6ZR08 3092 aa23.9■■□□□ 1.42
HSPG2-205ENST00000427897 SMARCA1P28370 1054 aa23.89■■□□□ 1.41
HSPG2-205ENST00000427897 HOXA13P31271 388 aaPredicted RBP23.89■■□□□ 1.41
HSPG2-205ENST00000427897 FCHSD1Q86WN1 690 aa23.89■■□□□ 1.41
HSPG2-205ENST00000427897 RAB11FIP4Q86YS3 637 aa23.89■■□□□ 1.41
HSPG2-205ENST00000427897 CUL5Q93034 780 aa23.89■■□□□ 1.41
HSPG2-205ENST00000427897 SPZ1Q9BXG8 430 aa23.89■■□□□ 1.41
HSPG2-205ENST00000427897 TRIM43BA6NCK2 446 aa23.88■■□□□ 1.41
HSPG2-205ENST00000427897 EIF3JO75822 258 aaKnown RBP23.88■■□□□ 1.41
HSPG2-205ENST00000427897 NR3C2P08235 984 aa23.88■■□□□ 1.41
HSPG2-205ENST00000427897 FAAP100Q0VG06 881 aa23.88■■□□□ 1.41
HSPG2-205ENST00000427897 ITGA7Q13683 1181 aa23.88■■□□□ 1.41
HSPG2-205ENST00000427897 MICU3Q86XE3 530 aa23.88■■□□□ 1.41
HSPG2-205ENST00000427897 CCDC82Q8N4S0 544 aa23.88■■□□□ 1.41
HSPG2-205ENST00000427897 TRIM43Q96BQ3 446 aaPredicted RBP23.88■■□□□ 1.41
HSPG2-205ENST00000427897 CDK7P50613 346 aa23.87■■□□□ 1.41
HSPG2-205ENST00000427897 SLC35G1Q2M3R5 365 aa23.87■■□□□ 1.41
HSPG2-205ENST00000427897 TSGA10IPQ3SY00 556 aa23.87■■□□□ 1.41
HSPG2-205ENST00000427897 FANCBQ8NB91 859 aa23.87■■□□□ 1.41
HSPG2-205ENST00000427897 SEZ6LQ9BYH1 1024 aa23.87■■□□□ 1.41
HSPG2-205ENST00000427897 OPLAHO14841 1288 aa23.86■■□□□ 1.41
HSPG2-205ENST00000427897 KIAA0355O15063 1070 aa23.86■■□□□ 1.41
HSPG2-205ENST00000427897 KPNA6O60684 536 aa23.86■■□□□ 1.41
HSPG2-205ENST00000427897 PLEKHA8P1O95397 391 aa23.86■■□□□ 1.41
HSPG2-205ENST00000427897 RASEFQ8IZ41 740 aa23.86■■□□□ 1.41
HSPG2-205ENST00000427897 CMTR1Q8N1G2 835 aaKnown RBP23.86■■□□□ 1.41
HSPG2-205ENST00000427897 SRBD1Q8N5C6 995 aaKnown RBP23.86■■□□□ 1.41
HSPG2-205ENST00000427897 SMARCC2Q8TAQ2 1214 aa23.86■■□□□ 1.41
HSPG2-205ENST00000427897 COPS5Q92905 334 aa23.86■■□□□ 1.41
HSPG2-205ENST00000427897 TCEANC2Q96MN5 208 aa23.86■■□□□ 1.41
HSPG2-205ENST00000427897 MRVI1Q9Y6F6 885 aa23.86■■□□□ 1.41
HSPG2-205ENST00000427897 GH1P01241 217 aa23.85■■□□□ 1.41
HSPG2-205ENST00000427897 CCND2P30279 289 aa23.85■■□□□ 1.41
HSPG2-205ENST00000427897 CHMP4BP1P59074 171 aa23.85■■□□□ 1.41
HSPG2-205ENST00000427897 LY6KQ17RY6 165 aa23.85■■□□□ 1.41
HSPG2-205ENST00000427897 ADCK5Q3MIX3 580 aa23.85■■□□□ 1.41
HSPG2-205ENST00000427897 SGMS1Q86VZ5 419 aa23.85■■□□□ 1.41
HSPG2-205ENST00000427897 MTG1Q9BT17 334 aaPredicted RBP23.85■■□□□ 1.41
HSPG2-205ENST00000427897 RBM28Q9NW13 759 aaKnown RBP23.85■■□□□ 1.41
HSPG2-205ENST00000427897 BAZ2BQ9UIF8 2168 aaKnown RBP23.85■■□□□ 1.41
HSPG2-205ENST00000427897 ZBTB43O43298 467 aa23.84■■□□□ 1.41
HSPG2-205ENST00000427897 PSMC6P62333 389 aa23.84■■□□□ 1.41
HSPG2-205ENST00000427897 EXOSC10Q01780 885 aaKnown RBP23.84■■□□□ 1.41
HSPG2-205ENST00000427897 COL9A3Q14050 684 aaPredicted RBP23.84■■□□□ 1.41
HSPG2-205ENST00000427897 JAKMIP1Q96N16 626 aaKnown RBP23.84■■□□□ 1.41
HSPG2-205ENST00000427897 PDCD2LQ9BRP1 358 aa23.84■■□□□ 1.41
HSPG2-205ENST00000427897 GHRHRQ02643 423 aa23.83■■□□□ 1.41
HSPG2-205ENST00000427897 FPGSQ05932 587 aa23.83■■□□□ 1.41
HSPG2-205ENST00000427897 PGM5Q15124 567 aa23.83■■□□□ 1.41
HSPG2-205ENST00000427897 FAM47CQ5HY64 1035 aa23.83■■□□□ 1.41
HSPG2-205ENST00000427897 KCNV1Q6PIU1 500 aa23.83■■□□□ 1.41
HSPG2-205ENST00000427897 APOA5Q6Q788 366 aa23.83■■□□□ 1.41
HSPG2-205ENST00000427897 BLOC1S2Q6QNY1 142 aa23.83■■□□□ 1.41
HSPG2-205ENST00000427897 KLF18A0A0U1RQI7 1052 aa23.82■■□□□ 1.4
HSPG2-205ENST00000427897 ARIH2O95376 493 aa23.82■■□□□ 1.4
HSPG2-205ENST00000427897 TIMP1P01033 207 aa23.82■■□□□ 1.4
HSPG2-205ENST00000427897 PSMA5P28066 241 aa23.82■■□□□ 1.4
HSPG2-205ENST00000427897 HSPA4P34932 840 aa23.82■■□□□ 1.4
HSPG2-205ENST00000427897 PURAQ00577 322 aaKnown RBP23.82■■□□□ 1.4
HSPG2-205ENST00000427897 RTN1Q16799 776 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms