RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 ADD3Q9UEY8 706 aaKnown RBP10.28□□□□□ -0.76
LINC00963-204ENST00000427778 ABCB11O95342 1321 aa10.28□□□□□ -0.76
LINC00963-204ENST00000427778 TMEM265A0A087WTH1 108 aa10.27□□□□□ -0.77
LINC00963-204ENST00000427778 SH2B2O14492 632 aaPredicted RBP10.27□□□□□ -0.77
LINC00963-204ENST00000427778 RARBP10826 455 aa10.27□□□□□ -0.77
LINC00963-204ENST00000427778 CST5P28325 142 aaPredicted RBP10.27□□□□□ -0.77
LINC00963-204ENST00000427778 SMARCA1P28370 1054 aa10.27□□□□□ -0.77
LINC00963-204ENST00000427778 TRAF1Q13077 416 aa10.27□□□□□ -0.77
LINC00963-204ENST00000427778 ACVR2BQ13705 512 aa10.27□□□□□ -0.77
LINC00963-204ENST00000427778 BAATQ14032 418 aaPredicted RBP10.27□□□□□ -0.77
LINC00963-204ENST00000427778 COL9A3Q14050 684 aaPredicted RBP10.27□□□□□ -0.77
LINC00963-204ENST00000427778 KRT32Q14532 448 aa10.27□□□□□ -0.77
LINC00963-204ENST00000427778 LRRC41Q15345 812 aa10.27□□□□□ -0.77
LINC00963-204ENST00000427778 SLC35G1Q2M3R5 365 aa10.27□□□□□ -0.77
LINC00963-204ENST00000427778 QRICH1Q2TAL8 776 aa10.27□□□□□ -0.77
LINC00963-204ENST00000427778 NSMFQ6X4W1 530 aa10.27□□□□□ -0.77
LINC00963-204ENST00000427778 CHST3Q7LGC8 479 aa10.27□□□□□ -0.77
LINC00963-204ENST00000427778 CATIPQ7Z7H3 387 aa10.27□□□□□ -0.77
LINC00963-204ENST00000427778 SGMS1Q86VZ5 419 aa10.27□□□□□ -0.77
LINC00963-204ENST00000427778 DNERQ8NFT8 737 aa10.27□□□□□ -0.77
LINC00963-204ENST00000427778 FAM184BQ9ULE4 1060 aa10.27□□□□□ -0.77
LINC00963-204ENST00000427778 ZBTB5O15062 677 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 ADAMTS4O75173 837 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 DUSP11O75319 330 aaKnown RBP10.26□□□□□ -0.77
LINC00963-204ENST00000427778 REC8O95072 547 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 FOSL2P15408 326 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 EDNRBP24530 442 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 KIF5BP33176 963 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 ALDH5A1P51649 535 aaPredicted RBP10.26□□□□□ -0.77
LINC00963-204ENST00000427778 RPS6P62753 249 aaKnown RBP10.26□□□□□ -0.77
LINC00963-204ENST00000427778 SNX17Q15036 470 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 CCDC144BQ3MJ40 725 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 TJAP1Q5JTD0 557 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 C1orf53Q5VUE5 145 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 SLC30A10Q6XR72 485 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 RNF207Q6ZRF8 634 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 FBXO11Q86XK2 927 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 ZNF654Q8IZM8 581 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 SAMD3Q8N6K7 520 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 MYLIPQ8WY64 445 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 TSEN34Q9BSV6 310 aaKnown RBP10.26□□□□□ -0.77
LINC00963-204ENST00000427778 SPZ1Q9BXG8 430 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 AMNQ9BXJ7 453 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 UPF3AQ9H1J1 476 aaKnown RBP10.26□□□□□ -0.77
LINC00963-204ENST00000427778 VTA1Q9NP79 307 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 XPNPEP3Q9NQH7 507 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 MAP3K20Q9NYL2 800 aaKnown RBP10.26□□□□□ -0.77
LINC00963-204ENST00000427778 HCSTQ9UBK5 93 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 PHF24Q9UPV7 400 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 SYNRGQ9UMZ2 1314 aa10.26□□□□□ -0.77
LINC00963-204ENST00000427778 NCOR1O75376 2440 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 KBTBD13C9JR72 458 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 OPLAHO14841 1288 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 ADCY6O43306 1168 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 CYTH3O43739 400 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 PPP1R11O60927 126 aaPredicted RBP10.25□□□□□ -0.77
LINC00963-204ENST00000427778 HMGB1P09429 215 aaKnown RBP10.25□□□□□ -0.77
LINC00963-204ENST00000427778 CALM1P0DP23 149 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 CALM2P0DP24 149 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 CALM3P0DP25 149 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 HSPA4P34932 840 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 RCAN1P53805 252 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 EXOSC10Q01780 885 aaKnown RBP10.25□□□□□ -0.77
LINC00963-204ENST00000427778 USH1GQ495M9 461 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 DHX32Q7L7V1 743 aaKnown RBP10.25□□□□□ -0.77
LINC00963-204ENST00000427778 RNF180Q86T96 592 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 MCF2L2Q86YR7 1114 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 KLHDC9Q8NEP7 349 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 KHSRPQ92945 711 aaKnown RBP eCLIP10.25□□□□□ -0.77
LINC00963-204ENST00000427778 NEK1Q96PY6 1258 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 LBHD1Q9BQE6 289 aaPredicted RBP10.25□□□□□ -0.77
LINC00963-204ENST00000427778 LZTS2Q9BRK4 669 aa10.25□□□□□ -0.77
LINC00963-204ENST00000427778 GPHNQ9NQX3 736 aaPredicted RBP10.25□□□□□ -0.77
LINC00963-204ENST00000427778 ZHX1Q9UKY1 873 aaPredicted RBP10.25□□□□□ -0.77
LINC00963-204ENST00000427778 MRPL11Q9Y3B7 192 aaKnown RBP10.25□□□□□ -0.77
LINC00963-204ENST00000427778 PNMA6FA0A0J9YX94 578 aa10.24□□□□□ -0.77
LINC00963-204ENST00000427778 RBM47A0AV96 593 aaKnown RBP10.24□□□□□ -0.77
LINC00963-204ENST00000427778 PTPDC1A2A3K4 754 aa10.24□□□□□ -0.77
LINC00963-204ENST00000427778 DHX16O60231 1041 aaKnown RBP10.24□□□□□ -0.77
LINC00963-204ENST00000427778 PBX2P40425 430 aa10.24□□□□□ -0.77
LINC00963-204ENST00000427778 GNAQP50148 359 aa10.24□□□□□ -0.77
LINC00963-204ENST00000427778 HSD17B4P51659 736 aa10.24□□□□□ -0.77
LINC00963-204ENST00000427778 GJA9P57773 515 aa10.24□□□□□ -0.77
LINC00963-204ENST00000427778 LRRC26Q2I0M4 334 aa10.24□□□□□ -0.77
LINC00963-204ENST00000427778 GJC2Q5T442 439 aaPredicted RBP10.24□□□□□ -0.77
LINC00963-204ENST00000427778 ANO1Q5XXA6 986 aa10.24□□□□□ -0.77
LINC00963-204ENST00000427778 CCSAPQ6IQ19 270 aaPredicted RBP10.24□□□□□ -0.77
LINC00963-204ENST00000427778 TAPT1Q6NXT6 567 aa10.24□□□□□ -0.77
LINC00963-204ENST00000427778 FBXL16Q8N461 479 aa10.24□□□□□ -0.77
LINC00963-204ENST00000427778 CTCFLQ8NI51 663 aaPredicted RBP10.24□□□□□ -0.77
LINC00963-204ENST00000427778 LENG1Q96BZ8 264 aaPredicted RBP10.24□□□□□ -0.77
LINC00963-204ENST00000427778 MPHOSPH6Q99547 160 aaKnown RBP10.24□□□□□ -0.77
LINC00963-204ENST00000427778 GNEQ9Y223 722 aaKnown RBP10.24□□□□□ -0.77
LINC00963-204ENST00000427778 Q9Y3F1 56 aa10.24□□□□□ -0.77
LINC00963-204ENST00000427778 SCN10AQ9Y5Y9 1956 aa10.24□□□□□ -0.77
LINC00963-204ENST00000427778 GBF1Q92538 1859 aa10.23□□□□□ -0.77
LINC00963-204ENST00000427778 TCF20Q9UGU0 1960 aaKnown RBP10.23□□□□□ -0.77
LINC00963-204ENST00000427778 MOXD2PA6NHM9 499 aa10.23□□□□□ -0.77
LINC00963-204ENST00000427778 CCDC69A6NI79 296 aa10.23□□□□□ -0.77
LINC00963-204ENST00000427778 B4DLN1 442 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms