RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 IWS1Q96ST2 819 aa28.96■■■□□ 2.23
HERPUD2-205ENST00000427455 PXMP2Q9NR77 195 aa28.96■■■□□ 2.23
HERPUD2-205ENST00000427455 BARHL2Q9NY43 387 aa28.96■■■□□ 2.23
HERPUD2-205ENST00000427455 FARP2O94887 1054 aaPredicted RBP28.95■■■□□ 2.22
HERPUD2-205ENST00000427455 SCG2P13521 617 aa28.95■■■□□ 2.22
HERPUD2-205ENST00000427455 NAPAP54920 295 aa28.95■■■□□ 2.22
HERPUD2-205ENST00000427455 CCDC144BQ3MJ40 725 aa28.95■■■□□ 2.22
HERPUD2-205ENST00000427455 ANO1Q5XXA6 986 aa28.95■■■□□ 2.22
HERPUD2-205ENST00000427455 NOL8Q76FK4 1167 aaKnown RBP28.95■■■□□ 2.22
HERPUD2-205ENST00000427455 EEPD1Q7L9B9 569 aa28.95■■■□□ 2.22
HERPUD2-205ENST00000427455 SLC26A6Q9BXS9 759 aa28.95■■■□□ 2.22
HERPUD2-205ENST00000427455 BACH2Q9BYV9 841 aa28.95■■■□□ 2.22
HERPUD2-205ENST00000427455 PSTPIP2Q9H939 334 aa28.95■■■□□ 2.22
HERPUD2-205ENST00000427455 STXBP3O00186 592 aa28.94■■■□□ 2.22
HERPUD2-205ENST00000427455 EIF2AK2P19525 551 aaKnown RBP28.94■■■□□ 2.22
HERPUD2-205ENST00000427455 SCRN1Q12765 414 aa28.94■■■□□ 2.22
HERPUD2-205ENST00000427455 TEX2Q8IWB9 1127 aa28.94■■■□□ 2.22
HERPUD2-205ENST00000427455 TRIM22Q8IYM9 498 aa28.94■■■□□ 2.22
HERPUD2-205ENST00000427455 SMARCC2Q8TAQ2 1214 aa28.94■■■□□ 2.22
HERPUD2-205ENST00000427455 TBC1D32Q96NH3 1257 aa28.94■■■□□ 2.22
HERPUD2-205ENST00000427455 MEIS2O14770 477 aa28.93■■■□□ 2.22
HERPUD2-205ENST00000427455 TYW1BQ6NUM6 668 aa28.93■■■□□ 2.22
HERPUD2-205ENST00000427455 USP17L6PQ6QN14 398 aa28.93■■■□□ 2.22
HERPUD2-205ENST00000427455 UBE2Q1Q7Z7E8 422 aa28.93■■■□□ 2.22
HERPUD2-205ENST00000427455 FCHSD1Q86WN1 690 aa28.93■■■□□ 2.22
HERPUD2-205ENST00000427455 CDKL5O76039 1030 aa28.92■■■□□ 2.22
HERPUD2-205ENST00000427455 RABEP1Q15276 862 aa28.92■■■□□ 2.22
HERPUD2-205ENST00000427455 PKN1Q16512 942 aa28.92■■■□□ 2.22
HERPUD2-205ENST00000427455 TAPT1Q6NXT6 567 aa28.92■■■□□ 2.22
HERPUD2-205ENST00000427455 LENG1Q96BZ8 264 aaPredicted RBP28.92■■■□□ 2.22
HERPUD2-205ENST00000427455 PDCD2LQ9BRP1 358 aa28.92■■■□□ 2.22
HERPUD2-205ENST00000427455 XPNPEP3Q9NQH7 507 aa28.92■■■□□ 2.22
HERPUD2-205ENST00000427455 MKI67P46013 3256 aaKnown RBP28.92■■■□□ 2.22
HERPUD2-205ENST00000427455 FRMPD4Q14CM0 1322 aa28.92■■■□□ 2.22
HERPUD2-205ENST00000427455 ADCYAP1R1P41586 468 aa28.91■■■□□ 2.22
HERPUD2-205ENST00000427455 SSRP1Q08945 709 aaKnown RBP28.91■■■□□ 2.22
HERPUD2-205ENST00000427455 STXBP2Q15833 593 aa28.91■■■□□ 2.22
HERPUD2-205ENST00000427455 ME3Q16798 604 aa28.91■■■□□ 2.22
HERPUD2-205ENST00000427455 CCDC12Q8WUD4 166 aaPredicted RBP28.91■■■□□ 2.22
HERPUD2-205ENST00000427455 ADCY6O43306 1168 aa28.9■■■□□ 2.22
HERPUD2-205ENST00000427455 PPFIA3O75145 1194 aa28.9■■■□□ 2.22
HERPUD2-205ENST00000427455 DUSP11O75319 330 aaKnown RBP28.9■■■□□ 2.22
HERPUD2-205ENST00000427455 NR3C2P08235 984 aa28.9■■■□□ 2.22
HERPUD2-205ENST00000427455 MNX1P50219 401 aaPredicted RBP28.9■■■□□ 2.22
HERPUD2-205ENST00000427455 TNFAIP2Q03169 654 aa28.9■■■□□ 2.22
HERPUD2-205ENST00000427455 PGM5Q15124 567 aa28.9■■■□□ 2.22
HERPUD2-205ENST00000427455 ARRDC4Q8NCT1 418 aa28.9■■■□□ 2.22
HERPUD2-205ENST00000427455 GTF3C6Q969F1 213 aa28.9■■■□□ 2.22
HERPUD2-205ENST00000427455 GLT8D2Q9H1C3 349 aa28.9■■■□□ 2.22
HERPUD2-205ENST00000427455 RIC8AQ9NPQ8 531 aa28.9■■■□□ 2.22
HERPUD2-205ENST00000427455 PDGFCQ9NRA1 345 aa28.9■■■□□ 2.22
HERPUD2-205ENST00000427455 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.89■■■□□ 2.22
HERPUD2-205ENST00000427455 DNM1LO00429 736 aa28.89■■■□□ 2.22
HERPUD2-205ENST00000427455 LARGE1O95461 756 aa28.89■■■□□ 2.22
HERPUD2-205ENST00000427455 ADCY7P51828 1080 aa28.89■■■□□ 2.22
HERPUD2-205ENST00000427455 MLLT1Q03111 559 aaPredicted RBP28.89■■■□□ 2.22
HERPUD2-205ENST00000427455 UBE2SQ16763 222 aa28.89■■■□□ 2.22
HERPUD2-205ENST00000427455 IQSEC1Q6DN90 963 aa28.89■■■□□ 2.22
HERPUD2-205ENST00000427455 IL27Q8NEV9 243 aa28.89■■■□□ 2.22
HERPUD2-205ENST00000427455 SYNRGQ9UMZ2 1314 aa28.89■■■□□ 2.21
HERPUD2-205ENST00000427455 RBM47A0AV96 593 aaKnown RBP28.88■■■□□ 2.21
HERPUD2-205ENST00000427455 ESYT2A0FGR8 921 aa28.88■■■□□ 2.21
HERPUD2-205ENST00000427455 DEXIO95424 95 aa28.88■■■□□ 2.21
HERPUD2-205ENST00000427455 DIS3LQ8TF46 1054 aaKnown RBP28.88■■■□□ 2.21
HERPUD2-205ENST00000427455 SCFD2Q8WU76 684 aa28.88■■■□□ 2.21
HERPUD2-205ENST00000427455 PAWRQ96IZ0 340 aaKnown RBP28.88■■■□□ 2.21
HERPUD2-205ENST00000427455 LIMCH1Q9UPQ0 1083 aa28.88■■■□□ 2.21
HERPUD2-205ENST00000427455 SMCO2A6NFE2 343 aa28.87■■■□□ 2.21
HERPUD2-205ENST00000427455 EIF3JO75822 258 aaKnown RBP28.87■■■□□ 2.21
HERPUD2-205ENST00000427455 CCND2P30279 289 aa28.87■■■□□ 2.21
HERPUD2-205ENST00000427455 NECAB2Q7Z6G3 386 aa28.87■■■□□ 2.21
HERPUD2-205ENST00000427455 RNF180Q86T96 592 aa28.87■■■□□ 2.21
HERPUD2-205ENST00000427455 NECAB1Q8N987 351 aa28.87■■■□□ 2.21
HERPUD2-205ENST00000427455 CCDC148Q8NFR7 591 aa28.87■■■□□ 2.21
HERPUD2-205ENST00000427455 IL31RAQ8NI17 732 aa28.87■■■□□ 2.21
HERPUD2-205ENST00000427455 STK36Q9NRP7 1315 aa28.87■■■□□ 2.21
HERPUD2-205ENST00000427455 KIAA1217Q5T5P2 1943 aa28.86■■■□□ 2.21
HERPUD2-205ENST00000427455 SPDYE3A6NKU9 549 aa28.86■■■□□ 2.21
HERPUD2-205ENST00000427455 ADAMTS4O75173 837 aa28.86■■■□□ 2.21
HERPUD2-205ENST00000427455 PGK1P00558 417 aa28.86■■■□□ 2.21
HERPUD2-205ENST00000427455 SMPD1P17405 629 aa28.86■■■□□ 2.21
HERPUD2-205ENST00000427455 LRRC41Q15345 812 aa28.86■■■□□ 2.21
HERPUD2-205ENST00000427455 VSIG10LQ86VR7 867 aa28.86■■■□□ 2.21
HERPUD2-205ENST00000427455 WDR11Q9BZH6 1224 aa28.86■■■□□ 2.21
HERPUD2-205ENST00000427455 ZMYND12Q9H0C1 365 aa28.86■■■□□ 2.21
HERPUD2-205ENST00000427455 SPC25Q9HBM1 224 aa28.86■■■□□ 2.21
HERPUD2-205ENST00000427455 GNEQ9Y223 722 aaKnown RBP28.86■■■□□ 2.21
HERPUD2-205ENST00000427455 KBTBD13C9JR72 458 aa28.85■■■□□ 2.21
HERPUD2-205ENST00000427455 MYCLP12524 364 aaPredicted RBP28.85■■■□□ 2.21
HERPUD2-205ENST00000427455 DUSP28Q4G0W2 176 aa28.85■■■□□ 2.21
HERPUD2-205ENST00000427455 GJC2Q5T442 439 aaPredicted RBP28.85■■■□□ 2.21
HERPUD2-205ENST00000427455 UPF3AQ9H1J1 476 aaKnown RBP28.85■■■□□ 2.21
HERPUD2-205ENST00000427455 C11orf49Q9H6J7 331 aa28.85■■■□□ 2.21
HERPUD2-205ENST00000427455 SH3GLB2Q9NR46 395 aa28.85■■■□□ 2.21
HERPUD2-205ENST00000427455 ST18O60284 1047 aa28.84■■■□□ 2.21
HERPUD2-205ENST00000427455 MYCNP04198 464 aaPredicted RBP28.84■■■□□ 2.21
HERPUD2-205ENST00000427455 GJA9P57773 515 aa28.84■■■□□ 2.21
HERPUD2-205ENST00000427455 TTLL4Q14679 1199 aa28.84■■■□□ 2.21
HERPUD2-205ENST00000427455 TLK2Q86UE8 772 aa28.84■■■□□ 2.21
HERPUD2-205ENST00000427455 EHMT1Q9H9B1 1298 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms