RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 DYNC1LI2O43237 492 aaPredicted RBP18.59■□□□□ 0.57
HLA-DQB2-230ENST00000427449 PURAQ00577 322 aaKnown RBP18.59■□□□□ 0.57
HLA-DQB2-230ENST00000427449 TMEM67Q5HYA8 995 aa18.59■□□□□ 0.57
HLA-DQB2-230ENST00000427449 C16orf59Q7L2K0 433 aa18.59■□□□□ 0.57
HLA-DQB2-230ENST00000427449 RALYLQ86SE5 291 aaKnown RBP18.59■□□□□ 0.57
HLA-DQB2-230ENST00000427449 RASEFQ8IZ41 740 aa18.59■□□□□ 0.57
HLA-DQB2-230ENST00000427449 ZNF654Q8IZM8 581 aa18.59■□□□□ 0.57
HLA-DQB2-230ENST00000427449 MAP3K14Q99558 947 aa18.59■□□□□ 0.57
HLA-DQB2-230ENST00000427449 AMNQ9BXJ7 453 aa18.59■□□□□ 0.57
HLA-DQB2-230ENST00000427449 VAT1LQ9HCJ6 419 aa18.59■□□□□ 0.57
HLA-DQB2-230ENST00000427449 PXMP2Q9NR77 195 aa18.59■□□□□ 0.57
HLA-DQB2-230ENST00000427449 PRC1O43663 620 aa18.58■□□□□ 0.56
HLA-DQB2-230ENST00000427449 PSMC6P62333 389 aa18.58■□□□□ 0.56
HLA-DQB2-230ENST00000427449 ARHGAP1Q07960 439 aa18.58■□□□□ 0.56
HLA-DQB2-230ENST00000427449 TRDNQ13061 729 aa18.58■□□□□ 0.56
HLA-DQB2-230ENST00000427449 ADCK5Q3MIX3 580 aa18.58■□□□□ 0.56
HLA-DQB2-230ENST00000427449 Q7L0L9 218 aa18.58■□□□□ 0.56
HLA-DQB2-230ENST00000427449 CTAGE1Q96RT6 745 aa18.58■□□□□ 0.56
HLA-DQB2-230ENST00000427449 SPZ1Q9BXG8 430 aa18.58■□□□□ 0.56
HLA-DQB2-230ENST00000427449 A6NJR5 290 aa18.57■□□□□ 0.56
HLA-DQB2-230ENST00000427449 B4GALT4O60513 344 aa18.57■□□□□ 0.56
HLA-DQB2-230ENST00000427449 DDAH1O94760 285 aa18.57■□□□□ 0.56
HLA-DQB2-230ENST00000427449 PLEKHA8P1O95397 391 aa18.57■□□□□ 0.56
HLA-DQB2-230ENST00000427449 KCNB2Q92953 911 aa18.57■□□□□ 0.56
HLA-DQB2-230ENST00000427449 MRPL11Q9Y3B7 192 aaKnown RBP18.57■□□□□ 0.56
HLA-DQB2-230ENST00000427449 MROH7Q68CQ1 1323 aa18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 TIMP1P01033 207 aa18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 LIFRP42702 1097 aa18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 EXOSC10Q01780 885 aaKnown RBP18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 PDE4DQ08499 809 aa18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 ITGA7Q13683 1181 aa18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 TSGA10IPQ3SY00 556 aa18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 RASIP1Q5U651 963 aa18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 SGMS1Q86VZ5 419 aa18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 SRBD1Q8N5C6 995 aaKnown RBP18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 SCFD2Q8WU76 684 aa18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 RMDN3Q96TC7 470 aa18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 LBHD1Q9BQE6 289 aaPredicted RBP18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 PDCD2LQ9BRP1 358 aa18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 WNT8AQ9H1J5 351 aa18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 SPC25Q9HBM1 224 aa18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 ANO2Q9NQ90 1003 aa18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 WDR81Q562E7 1941 aa18.56■□□□□ 0.56
HLA-DQB2-230ENST00000427449 RBAK-RBAKDNI3L0D1 243 aa18.55■□□□□ 0.56
HLA-DQB2-230ENST00000427449 HOXA13P31271 388 aaPredicted RBP18.55■□□□□ 0.56
HLA-DQB2-230ENST00000427449 FUT2Q10981 343 aa18.55■□□□□ 0.56
HLA-DQB2-230ENST00000427449 PPP2R5BQ15173 497 aa18.55■□□□□ 0.56
HLA-DQB2-230ENST00000427449 HOMER1Q86YM7 354 aa18.55■□□□□ 0.56
HLA-DQB2-230ENST00000427449 IWS1Q96ST2 819 aa18.55■□□□□ 0.56
HLA-DQB2-230ENST00000427449 LRRC2Q9BYS8 371 aa18.55■□□□□ 0.56
HLA-DQB2-230ENST00000427449 TMEM39AQ9NV64 488 aa18.55■□□□□ 0.56
HLA-DQB2-230ENST00000427449 PCDHA1Q9Y5I3 950 aa18.55■□□□□ 0.56
HLA-DQB2-230ENST00000427449 TRANK1O15050 2925 aa18.55■□□□□ 0.56
HLA-DQB2-230ENST00000427449 PNMA6FA0A0J9YX94 578 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 DCDC2CA8MYV0 355 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 NKRFO15226 690 aaKnown RBP eCLIP18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 CDC45O75419 566 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 CABYRO75952 493 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 CFBP00751 764 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 HOXD8P13378 290 aaPredicted RBP18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 EIF2AK2P19525 551 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 RXRAP19793 462 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 PGM5Q15124 567 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 MFSD5Q6N075 450 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 MCF2L2Q86YR7 1114 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 OR6J1Q8NGC5 347 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 NSUN6Q8TEA1 469 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 PPP1R13LQ8WUF5 828 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 KAT2BQ92831 832 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 GPKOWQ92917 476 aaPredicted RBP eCLIP18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 TMEM87BQ96K49 555 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 NOC4LQ9BVI4 516 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 AP5M1Q9H0R1 490 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 TRPV6Q9H1D0 765 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 MTMR10Q9NXD2 777 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 PRKAG2Q9UGJ0 569 aa18.54■□□□□ 0.56
HLA-DQB2-230ENST00000427449 DHX16O60231 1041 aaKnown RBP18.53■□□□□ 0.56
HLA-DQB2-230ENST00000427449 NR3C2P08235 984 aa18.53■□□□□ 0.56
HLA-DQB2-230ENST00000427449 MMP3P08254 477 aa18.53■□□□□ 0.56
HLA-DQB2-230ENST00000427449 SMARCA1P28370 1054 aa18.53■□□□□ 0.56
HLA-DQB2-230ENST00000427449 MCM5P33992 734 aa18.53■□□□□ 0.56
HLA-DQB2-230ENST00000427449 SEMA3FQ13275 785 aa18.53■□□□□ 0.56
HLA-DQB2-230ENST00000427449 LY6KQ17RY6 165 aa18.53■□□□□ 0.56
HLA-DQB2-230ENST00000427449 NOL8Q76FK4 1167 aaKnown RBP18.53■□□□□ 0.56
HLA-DQB2-230ENST00000427449 CMTR1Q8N1G2 835 aaKnown RBP18.53■□□□□ 0.56
HLA-DQB2-230ENST00000427449 EMID1Q96A84 441 aaPredicted RBP18.53■□□□□ 0.56
HLA-DQB2-230ENST00000427449 GUCD1Q96NT3 240 aa18.53■□□□□ 0.56
HLA-DQB2-230ENST00000427449 ALDH8A1Q9H2A2 487 aaPredicted RBP18.53■□□□□ 0.56
HLA-DQB2-230ENST00000427449 MAP3K20Q9NYL2 800 aaKnown RBP18.53■□□□□ 0.56
HLA-DQB2-230ENST00000427449 DDX41Q9UJV9 622 aaKnown RBP18.53■□□□□ 0.56
HLA-DQB2-230ENST00000427449 CNTNAP5Q8WYK1 1306 aa18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 MEIS2O14770 477 aa18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 TXNP10599 105 aaKnown RBP18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 RAG1P15918 1043 aa18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 MRPS9P82933 396 aaKnown RBP18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 SP2Q02086 613 aa18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 FPGSQ05932 587 aa18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 SART3Q15020 963 aaKnown RBP18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 FAM109BQ6ICB4 259 aaPredicted RBP18.52■□□□□ 0.56
HLA-DQB2-230ENST00000427449 CATIPQ7Z7H3 387 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms