RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 RGS22Q8NE09 1264 aa11.78□□□□□ -0.52
GACAT3-201ENST00000426539 OR6J1Q8NGC5 347 aa11.78□□□□□ -0.52
GACAT3-201ENST00000426539 PPP1R13LQ8WUF5 828 aa11.78□□□□□ -0.52
GACAT3-201ENST00000426539 SEZ6LQ9BYH1 1024 aa11.78□□□□□ -0.52
GACAT3-201ENST00000426539 DIAPH3Q9NSV4 1193 aa11.78□□□□□ -0.52
GACAT3-201ENST00000426539 TRMT13Q9NUP7 481 aaKnown RBP11.78□□□□□ -0.52
GACAT3-201ENST00000426539 ZSWIM5Q9P217 1185 aa11.78□□□□□ -0.52
GACAT3-201ENST00000426539 PNMA2Q9UL42 364 aa11.78□□□□□ -0.52
GACAT3-201ENST00000426539 CDH23Q9H251 3354 aa11.77□□□□□ -0.53
GACAT3-201ENST00000426539 FGBP02675 491 aa11.77□□□□□ -0.53
GACAT3-201ENST00000426539 MYL3P08590 195 aa11.77□□□□□ -0.53
GACAT3-201ENST00000426539 CYP2C9P11712 490 aa11.77□□□□□ -0.53
GACAT3-201ENST00000426539 PDE4DQ08499 809 aa11.77□□□□□ -0.53
GACAT3-201ENST00000426539 CDC37Q16543 378 aaPredicted RBP11.77□□□□□ -0.53
GACAT3-201ENST00000426539 OTOP2Q7RTS6 562 aa11.77□□□□□ -0.53
GACAT3-201ENST00000426539 ADGRF4Q8IZF3 695 aa11.77□□□□□ -0.53
GACAT3-201ENST00000426539 DNERQ8NFT8 737 aa11.77□□□□□ -0.53
GACAT3-201ENST00000426539 SCLYQ96I15 445 aa11.77□□□□□ -0.53
GACAT3-201ENST00000426539 ZSCAN10Q96SZ4 725 aaPredicted RBP11.77□□□□□ -0.53
GACAT3-201ENST00000426539 DSCC1Q9BVC3 393 aa11.77□□□□□ -0.53
GACAT3-201ENST00000426539 POLR3EQ9NVU0 708 aa11.77□□□□□ -0.53
GACAT3-201ENST00000426539 COL20A1Q9P218 1284 aa11.77□□□□□ -0.53
GACAT3-201ENST00000426539 YBX2Q9Y2T7 364 aaKnown RBP11.77□□□□□ -0.53
GACAT3-201ENST00000426539 A6NJR5 290 aa11.76□□□□□ -0.53
GACAT3-201ENST00000426539 CHRM1P11229 460 aaPredicted RBP11.76□□□□□ -0.53
GACAT3-201ENST00000426539 PDE4AP27815 886 aa11.76□□□□□ -0.53
GACAT3-201ENST00000426539 NT5C2P49902 561 aa11.76□□□□□ -0.53
GACAT3-201ENST00000426539 CPT1AP50416 773 aa11.76□□□□□ -0.53
GACAT3-201ENST00000426539 PPP2R5BQ15173 497 aa11.76□□□□□ -0.53
GACAT3-201ENST00000426539 QRICH1Q2TAL8 776 aa11.76□□□□□ -0.53
GACAT3-201ENST00000426539 NBPF20Q3BBV1 942 aa11.76□□□□□ -0.53
GACAT3-201ENST00000426539 CCDC62Q6P9F0 684 aa11.76□□□□□ -0.53
GACAT3-201ENST00000426539 IQCA1Q86XH1 822 aa11.76□□□□□ -0.53
GACAT3-201ENST00000426539 SYTL5Q8TDW5 730 aaPredicted RBP11.76□□□□□ -0.53
GACAT3-201ENST00000426539 SCFD2Q8WU76 684 aa11.76□□□□□ -0.53
GACAT3-201ENST00000426539 TAAR1Q96RJ0 339 aa11.76□□□□□ -0.53
GACAT3-201ENST00000426539 MTG1Q9BT17 334 aaPredicted RBP11.76□□□□□ -0.53
GACAT3-201ENST00000426539 KAT14Q9H8E8 782 aa11.76□□□□□ -0.53
GACAT3-201ENST00000426539 TNKSO95271 1327 aa11.76□□□□□ -0.53
GACAT3-201ENST00000426539 UNC80Q8N2C7 3258 aa11.76□□□□□ -0.53
GACAT3-201ENST00000426539 EYSQ5T1H1 3165 aa11.75□□□□□ -0.53
GACAT3-201ENST00000426539 HIP1O00291 1037 aa11.75□□□□□ -0.53
GACAT3-201ENST00000426539 NKRFO15226 690 aaKnown RBP eCLIP11.75□□□□□ -0.53
GACAT3-201ENST00000426539 TXNP10599 105 aaKnown RBP11.75□□□□□ -0.53
GACAT3-201ENST00000426539 GSPT1P15170 499 aaKnown RBP11.75□□□□□ -0.53
GACAT3-201ENST00000426539 ADGRE1Q14246 886 aa11.75□□□□□ -0.53
GACAT3-201ENST00000426539 CCDC178Q5BJE1 867 aa11.75□□□□□ -0.53
GACAT3-201ENST00000426539 NKX2-4Q9H2Z4 354 aa11.75□□□□□ -0.53
GACAT3-201ENST00000426539 PRDM12Q9H4Q4 367 aa11.75□□□□□ -0.53
GACAT3-201ENST00000426539 JMJD4Q9H9V9 463 aa11.75□□□□□ -0.53
GACAT3-201ENST00000426539 PRDM6Q9NQX0 595 aa11.75□□□□□ -0.53
GACAT3-201ENST00000426539 ABCB11O95342 1321 aa11.75□□□□□ -0.53
GACAT3-201ENST00000426539 CUL9Q8IWT3 2517 aa11.74□□□□□ -0.53
GACAT3-201ENST00000426539 OPLAHO14841 1288 aa11.74□□□□□ -0.53
GACAT3-201ENST00000426539 SUPT20HL2P0C7V6 817 aa11.74□□□□□ -0.53
GACAT3-201ENST00000426539 MYOGP15173 224 aa11.74□□□□□ -0.53
GACAT3-201ENST00000426539 RABGGTBP53611 331 aa11.74□□□□□ -0.53
GACAT3-201ENST00000426539 TTLL4Q14679 1199 aa11.74□□□□□ -0.53
GACAT3-201ENST00000426539 SEC23AQ15436 765 aa11.74□□□□□ -0.53
GACAT3-201ENST00000426539 RAB30Q15771 203 aa11.74□□□□□ -0.53
GACAT3-201ENST00000426539 IMMTQ16891 758 aaKnown RBP11.74□□□□□ -0.53
GACAT3-201ENST00000426539 SLC35G1Q2M3R5 365 aa11.74□□□□□ -0.53
GACAT3-201ENST00000426539 ASPRV1Q53RT3 343 aa11.74□□□□□ -0.53
GACAT3-201ENST00000426539 CYB5R4Q7L1T6 521 aa11.74□□□□□ -0.53
GACAT3-201ENST00000426539 STAG2Q8N3U4 1231 aa11.74□□□□□ -0.53
GACAT3-201ENST00000426539 CTAGE1Q96RT6 745 aa11.74□□□□□ -0.53
GACAT3-201ENST00000426539 VAT1LQ9HCJ6 419 aa11.74□□□□□ -0.53
GACAT3-201ENST00000426539 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
GACAT3-201ENST00000426539 LAMA4Q16363 1823 aa11.74□□□□□ -0.53
GACAT3-201ENST00000426539 RBAK-RBAKDNI3L0D1 243 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 KPNA6O60684 536 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 PPP1R11O60927 126 aaPredicted RBP11.73□□□□□ -0.53
GACAT3-201ENST00000426539 PARP1P09874 1014 aaKnown RBP11.73□□□□□ -0.53
GACAT3-201ENST00000426539 ARHGAP1Q07960 439 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 LY6KQ17RY6 165 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 FAM47CQ5HY64 1035 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 NFRKBQ6P4R8 1299 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 SEPT14Q6ZU15 432 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 DEFB128Q7Z7B8 93 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 FBXO11Q86XK2 927 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 RPUSD2Q8IZ73 545 aaKnown RBP11.73□□□□□ -0.53
GACAT3-201ENST00000426539 NSUN6Q8TEA1 469 aaKnown RBP11.73□□□□□ -0.53
GACAT3-201ENST00000426539 AFG1LQ8WV93 481 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 KAT2BQ92831 832 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 MTMR8Q96EF0 704 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 MPHOSPH6Q99547 160 aaKnown RBP11.73□□□□□ -0.53
GACAT3-201ENST00000426539 KRT23Q9C075 422 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 MAF1Q9H063 256 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 MTIF3Q9H2K0 278 aaKnown RBP11.73□□□□□ -0.53
GACAT3-201ENST00000426539 CTNNA3Q9UI47 895 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 MSRAQ9UJ68 235 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 SCN10AQ9Y5Y9 1956 aa11.73□□□□□ -0.53
GACAT3-201ENST00000426539 RAD50Q92878 1312 aa11.72□□□□□ -0.53
GACAT3-201ENST00000426539 B4DLN1 442 aa11.72□□□□□ -0.53
GACAT3-201ENST00000426539 MMP3P08254 477 aa11.72□□□□□ -0.53
GACAT3-201ENST00000426539 PYGBP11216 843 aa11.72□□□□□ -0.53
GACAT3-201ENST00000426539 CLCN6P51797 869 aa11.72□□□□□ -0.53
GACAT3-201ENST00000426539 MRPL12P52815 198 aaKnown RBP11.72□□□□□ -0.53
GACAT3-201ENST00000426539 GHRHRQ02643 423 aa11.72□□□□□ -0.53
GACAT3-201ENST00000426539 PTPN11Q06124 597 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms