RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 EFCAB14O75071 495 aa16.83■□□□□ 0.28
HDAC6-206ENST00000426196 RAB11FIP3O75154 756 aa16.83■□□□□ 0.28
HDAC6-206ENST00000426196 MCCP23508 829 aa16.83■□□□□ 0.28
HDAC6-206ENST00000426196 CHMP4BP1P59074 171 aa16.83■□□□□ 0.28
HDAC6-206ENST00000426196 SNAP25P60880 206 aa16.83■□□□□ 0.28
HDAC6-206ENST00000426196 PTGISQ16647 500 aa16.83■□□□□ 0.28
HDAC6-206ENST00000426196 PPP4R3BQ5MIZ7 849 aa16.83■□□□□ 0.28
HDAC6-206ENST00000426196 MICAL3Q7RTP6 2002 aa16.83■□□□□ 0.28
HDAC6-206ENST00000426196 NEDD1Q8NHV4 660 aa16.83■□□□□ 0.28
HDAC6-206ENST00000426196 CHMP4CQ96CF2 233 aa16.83■□□□□ 0.28
HDAC6-206ENST00000426196 ABHD14A-ACY1A0A1B0GW23 586 aa16.82■□□□□ 0.28
HDAC6-206ENST00000426196 A6NJR5 290 aa16.82■□□□□ 0.28
HDAC6-206ENST00000426196 SELPP16109 830 aa16.82■□□□□ 0.28
HDAC6-206ENST00000426196 PDE4BQ07343 736 aa16.82■□□□□ 0.28
HDAC6-206ENST00000426196 BAATQ14032 418 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-206ENST00000426196 KCTD1Q719H9 257 aa16.82■□□□□ 0.28
HDAC6-206ENST00000426196 LRRC8DQ7L1W4 858 aa16.82■□□□□ 0.28
HDAC6-206ENST00000426196 FBXO22Q8NEZ5 403 aa16.82■□□□□ 0.28
HDAC6-206ENST00000426196 SCFD2Q8WU76 684 aa16.82■□□□□ 0.28
HDAC6-206ENST00000426196 MPHOSPH6Q99547 160 aaKnown RBP16.82■□□□□ 0.28
HDAC6-206ENST00000426196 CTNNA3Q9UI47 895 aa16.82■□□□□ 0.28
HDAC6-206ENST00000426196 PRR12Q9ULL5 1215 aa16.82■□□□□ 0.28
HDAC6-206ENST00000426196 POTEB3A0JP26 581 aa16.81■□□□□ 0.28
HDAC6-206ENST00000426196 PTPDC1A2A3K4 754 aa16.81■□□□□ 0.28
HDAC6-206ENST00000426196 APPP05067 770 aa16.81■□□□□ 0.28
HDAC6-206ENST00000426196 ICAM1P05362 532 aa16.81■□□□□ 0.28
HDAC6-206ENST00000426196 GNAT2P19087 354 aa16.81■□□□□ 0.28
HDAC6-206ENST00000426196 PDE4DQ08499 809 aa16.81■□□□□ 0.28
HDAC6-206ENST00000426196 PTPROQ16827 1216 aa16.81■□□□□ 0.28
HDAC6-206ENST00000426196 TIGD5Q53EQ6 642 aa16.81■□□□□ 0.28
HDAC6-206ENST00000426196 RCSD1Q6JBY9 416 aa16.81■□□□□ 0.28
HDAC6-206ENST00000426196 POTEBQ6S5H4 581 aa16.81■□□□□ 0.28
HDAC6-206ENST00000426196 NEK9Q8TD19 979 aa16.81■□□□□ 0.28
HDAC6-206ENST00000426196 EPB41L4AQ9HCS5 686 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-206ENST00000426196 PRKAG3Q9UGI9 489 aa16.81■□□□□ 0.28
HDAC6-206ENST00000426196 H3BQ06 376 aaPredicted RBP16.8■□□□□ 0.28
HDAC6-206ENST00000426196 GPAA1O43292 621 aa16.8■□□□□ 0.28
HDAC6-206ENST00000426196 SLC3A2P08195 630 aaKnown RBP16.8■□□□□ 0.28
HDAC6-206ENST00000426196 TFAP4Q01664 338 aa16.8■□□□□ 0.28
HDAC6-206ENST00000426196 FAM117BQ6P1L5 589 aa16.8■□□□□ 0.28
HDAC6-206ENST00000426196 APPBP2Q92624 585 aa16.8■□□□□ 0.28
HDAC6-206ENST00000426196 MRPL38Q96DV4 380 aaKnown RBP16.8■□□□□ 0.28
HDAC6-206ENST00000426196 MFSD14AQ96MC6 490 aa16.8■□□□□ 0.28
HDAC6-206ENST00000426196 UPF3BQ9BZI7 483 aaKnown RBP16.8■□□□□ 0.28
HDAC6-206ENST00000426196 CXCL10P02778 98 aa16.79■□□□□ 0.28
HDAC6-206ENST00000426196 ZP2Q05996 745 aa16.79■□□□□ 0.28
HDAC6-206ENST00000426196 IKBKEQ14164 716 aa16.79■□□□□ 0.28
HDAC6-206ENST00000426196 GPNMBQ14956 572 aa16.79■□□□□ 0.28
HDAC6-206ENST00000426196 HFE2Q6ZVN8 426 aa16.79■□□□□ 0.28
HDAC6-206ENST00000426196 OSBP2Q969R2 916 aa16.79■□□□□ 0.28
HDAC6-206ENST00000426196 STX8Q9UNK0 236 aa16.79■□□□□ 0.28
HDAC6-206ENST00000426196 INSL6Q9Y581 213 aa16.79■□□□□ 0.28
HDAC6-206ENST00000426196 TECTAO75443 2155 aa16.78■□□□□ 0.28
HDAC6-206ENST00000426196 NLRC5Q86WI3 1866 aa16.78■□□□□ 0.28
HDAC6-206ENST00000426196 NFIBO00712 420 aa16.78■□□□□ 0.28
HDAC6-206ENST00000426196 TXNP10599 105 aaKnown RBP16.78■□□□□ 0.28
HDAC6-206ENST00000426196 CALML3P27482 149 aa16.78■□□□□ 0.28
HDAC6-206ENST00000426196 RBL2Q08999 1139 aa16.78■□□□□ 0.28
HDAC6-206ENST00000426196 CCDC96Q2M329 555 aa16.78■□□□□ 0.28
HDAC6-206ENST00000426196 GDF6Q6KF10 455 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-206ENST00000426196 EP400NLQ6ZTU2 488 aa16.78■□□□□ 0.28
HDAC6-206ENST00000426196 SESTD1Q86VW0 696 aa16.78■□□□□ 0.28
HDAC6-206ENST00000426196 COPS5Q92905 334 aa16.78■□□□□ 0.28
HDAC6-206ENST00000426196 C17orf80Q9BSJ5 609 aa16.78■□□□□ 0.28
HDAC6-206ENST00000426196 NACAP1Q9BZK3 213 aa16.78■□□□□ 0.28
HDAC6-206ENST00000426196 B4DLN1 442 aa16.77■□□□□ 0.28
HDAC6-206ENST00000426196 NBNO60934 754 aa16.77■□□□□ 0.28
HDAC6-206ENST00000426196 CKBP12277 381 aa16.77■□□□□ 0.28
HDAC6-206ENST00000426196 MRPL12P52815 198 aaKnown RBP16.77■□□□□ 0.28
HDAC6-206ENST00000426196 SLC30A10Q6XR72 485 aa16.77■□□□□ 0.28
HDAC6-206ENST00000426196 ADHFE1Q8IWW8 467 aa16.77■□□□□ 0.28
HDAC6-206ENST00000426196 KBTBD3Q8NAB2 608 aa16.77■□□□□ 0.28
HDAC6-206ENST00000426196 PABPC5Q96DU9 382 aaKnown RBP16.77■□□□□ 0.28
HDAC6-206ENST00000426196 SAMD11Q96NU1 681 aa16.77■□□□□ 0.28
HDAC6-206ENST00000426196 RANBP17Q9H2T7 1088 aaKnown RBP16.77■□□□□ 0.28
HDAC6-206ENST00000426196 MTMR7Q9Y216 660 aa16.77■□□□□ 0.28
HDAC6-206ENST00000426196 CACNA1HO95180 2353 aa16.76■□□□□ 0.27
HDAC6-206ENST00000426196 ZFYP08048 801 aaPredicted RBP16.76■□□□□ 0.27
HDAC6-206ENST00000426196 RNF207Q6ZRF8 634 aa16.76■□□□□ 0.27
HDAC6-206ENST00000426196 IFNL3Q8IZI9 196 aa16.76■□□□□ 0.27
HDAC6-206ENST00000426196 BANK1Q8NDB2 785 aa16.76■□□□□ 0.27
HDAC6-206ENST00000426196 DNERQ8NFT8 737 aa16.76■□□□□ 0.27
HDAC6-206ENST00000426196 PANK1Q8TE04 598 aa16.76■□□□□ 0.27
HDAC6-206ENST00000426196 DHX38Q92620 1227 aaKnown RBP16.76■□□□□ 0.27
HDAC6-206ENST00000426196 CTAGE1Q96RT6 745 aa16.76■□□□□ 0.27
HDAC6-206ENST00000426196 KIAA1217Q5T5P2 1943 aa16.75■□□□□ 0.27
HDAC6-206ENST00000426196 C19orf67A6NJJ6 358 aa16.75■□□□□ 0.27
HDAC6-206ENST00000426196 TSPY2A6NKD2 308 aa16.75■□□□□ 0.27
HDAC6-206ENST00000426196 PATL2C9JE40 543 aaKnown RBP16.75■□□□□ 0.27
HDAC6-206ENST00000426196 RNF113AO15541 343 aaKnown RBP16.75■□□□□ 0.27
HDAC6-206ENST00000426196 EDNRBP24530 442 aa16.75■□□□□ 0.27
HDAC6-206ENST00000426196 TCTN1Q2MV58 587 aa16.75■□□□□ 0.27
HDAC6-206ENST00000426196 RASGRP2Q7LDG7 609 aa16.75■□□□□ 0.27
HDAC6-206ENST00000426196 DCAF4Q8WV16 495 aa16.75■□□□□ 0.27
HDAC6-206ENST00000426196 AFG1LQ8WV93 481 aa16.75■□□□□ 0.27
HDAC6-206ENST00000426196 POP1Q99575 1024 aaKnown RBP16.75■□□□□ 0.27
HDAC6-206ENST00000426196 NAPBQ9H115 298 aa16.75■□□□□ 0.27
HDAC6-206ENST00000426196 PNMA2Q9UL42 364 aa16.75■□□□□ 0.27
HDAC6-206ENST00000426196 RALGAPA2Q2PPJ7 1873 aa16.74■□□□□ 0.27
HDAC6-206ENST00000426196 SPTBN4Q9H254 2564 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms