RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 ELP1O95163 1332 aa20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 KIAA1217Q5T5P2 1943 aa20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 RBM47A0AV96 593 aaKnown RBP20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 HMGB1P09429 215 aaKnown RBP20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 HSD17B4P51659 736 aa20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 IRX5P78411 483 aaPredicted RBP20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 BEX3Q00994 111 aa20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 TLE2Q04725 743 aa20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 COL9A3Q14050 684 aaPredicted RBP20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 ARHGEF16Q5VV41 709 aa20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 RASEFQ8IZ41 740 aa20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 SCFD2Q8WU76 684 aa20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 PIBF1Q8WXW3 757 aa20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 RRP36Q96EU6 259 aaKnown RBP20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 TAAR1Q96RJ0 339 aa20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 COL20A1Q9P218 1284 aa20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 SEC63Q9UGP8 760 aaKnown RBP20.25■□□□□ 0.83
SLC6A1-202ENST00000425938 CTAGE5O15320 804 aa20.24■□□□□ 0.83
SLC6A1-202ENST00000425938 PQBP1O60828 265 aaKnown RBP20.24■□□□□ 0.83
SLC6A1-202ENST00000425938 GHRHRQ02643 423 aa20.24■□□□□ 0.83
SLC6A1-202ENST00000425938 PPP2R5BQ15173 497 aa20.24■□□□□ 0.83
SLC6A1-202ENST00000425938 SGMS1Q86VZ5 419 aa20.24■□□□□ 0.83
SLC6A1-202ENST00000425938 LRCH3Q96II8 777 aa20.24■□□□□ 0.83
SLC6A1-202ENST00000425938 PDLIM7Q9NR12 457 aa20.24■□□□□ 0.83
SLC6A1-202ENST00000425938 GCOM1H8Y6P7 765 aaPredicted RBP20.23■□□□□ 0.83
SLC6A1-202ENST00000425938 OPLAHO14841 1288 aa20.23■□□□□ 0.83
SLC6A1-202ENST00000425938 NKRFO15226 690 aaKnown RBP eCLIP20.23■□□□□ 0.83
SLC6A1-202ENST00000425938 CABYRO75952 493 aa20.23■□□□□ 0.83
SLC6A1-202ENST00000425938 POLR2MP0CAP2 368 aa20.23■□□□□ 0.83
SLC6A1-202ENST00000425938 EIF2AK2P19525 551 aaKnown RBP20.23■□□□□ 0.83
SLC6A1-202ENST00000425938 RXRAP19793 462 aa20.23■□□□□ 0.83
SLC6A1-202ENST00000425938 TTLL4Q14679 1199 aa20.23■□□□□ 0.83
SLC6A1-202ENST00000425938 STXBP2Q15833 593 aa20.23■□□□□ 0.83
SLC6A1-202ENST00000425938 ADCK5Q3MIX3 580 aa20.23■□□□□ 0.83
SLC6A1-202ENST00000425938 GPR153Q6NV75 609 aa20.23■□□□□ 0.83
SLC6A1-202ENST00000425938 MICU3Q86XE3 530 aa20.23■□□□□ 0.83
SLC6A1-202ENST00000425938 MROH7Q68CQ1 1323 aa20.23■□□□□ 0.83
SLC6A1-202ENST00000425938 A0A0U1RQG5 324 aaPredicted RBP20.22■□□□□ 0.83
SLC6A1-202ENST00000425938 DCDC2CA8MYV0 355 aa20.22■□□□□ 0.83
SLC6A1-202ENST00000425938 CLTBP09497 229 aa20.22■□□□□ 0.83
SLC6A1-202ENST00000425938 HSPA4P34932 840 aa20.22■□□□□ 0.83
SLC6A1-202ENST00000425938 FGD1P98174 961 aa20.22■□□□□ 0.83
SLC6A1-202ENST00000425938 EXOSC10Q01780 885 aaKnown RBP20.22■□□□□ 0.83
SLC6A1-202ENST00000425938 BRDTQ58F21 947 aaPredicted RBP20.22■□□□□ 0.83
SLC6A1-202ENST00000425938 ANKRD33Q7Z3H0 272 aa20.22■□□□□ 0.83
SLC6A1-202ENST00000425938 FANCBQ8NB91 859 aa20.22■□□□□ 0.83
SLC6A1-202ENST00000425938 OR6J1Q8NGC5 347 aa20.22■□□□□ 0.83
SLC6A1-202ENST00000425938 TCEANC2Q96MN5 208 aa20.22■□□□□ 0.83
SLC6A1-202ENST00000425938 TOX2Q96NM4 488 aa20.22■□□□□ 0.83
SLC6A1-202ENST00000425938 PXMP2Q9NR77 195 aa20.22■□□□□ 0.83
SLC6A1-202ENST00000425938 LTBP2Q14767 1821 aa20.22■□□□□ 0.83
SLC6A1-202ENST00000425938 TRIM43BA6NCK2 446 aa20.21■□□□□ 0.83
SLC6A1-202ENST00000425938 PLEKHA8P1O95397 391 aa20.21■□□□□ 0.83
SLC6A1-202ENST00000425938 TXNP10599 105 aaKnown RBP20.21■□□□□ 0.83
SLC6A1-202ENST00000425938 PTGS1P23219 599 aa20.21■□□□□ 0.83
SLC6A1-202ENST00000425938 HOXA13P31271 388 aaPredicted RBP20.21■□□□□ 0.83
SLC6A1-202ENST00000425938 CPT1AP50416 773 aa20.21■□□□□ 0.83
SLC6A1-202ENST00000425938 TMEM63BQ5T3F8 832 aa20.21■□□□□ 0.83
SLC6A1-202ENST00000425938 CXCL17Q6UXB2 119 aa20.21■□□□□ 0.83
SLC6A1-202ENST00000425938 SH3RF1Q7Z6J0 888 aa20.21■□□□□ 0.83
SLC6A1-202ENST00000425938 RAB11FIP4Q86YS3 637 aa20.21■□□□□ 0.83
SLC6A1-202ENST00000425938 SRBD1Q8N5C6 995 aaKnown RBP20.21■□□□□ 0.83
SLC6A1-202ENST00000425938 KCNB2Q92953 911 aa20.21■□□□□ 0.83
SLC6A1-202ENST00000425938 TRIM43Q96BQ3 446 aaPredicted RBP20.21■□□□□ 0.83
SLC6A1-202ENST00000425938 ARVCFO00192 962 aa20.2■□□□□ 0.82
SLC6A1-202ENST00000425938 ZBTB43O43298 467 aa20.2■□□□□ 0.82
SLC6A1-202ENST00000425938 EIF3JO75822 258 aaKnown RBP20.2■□□□□ 0.82
SLC6A1-202ENST00000425938 NR3C2P08235 984 aa20.2■□□□□ 0.82
SLC6A1-202ENST00000425938 APOA5Q6Q788 366 aa20.2■□□□□ 0.82
SLC6A1-202ENST00000425938 SEPT14Q6ZU15 432 aa20.2■□□□□ 0.82
SLC6A1-202ENST00000425938 BADQ92934 168 aa20.2■□□□□ 0.82
SLC6A1-202ENST00000425938 JAKMIP1Q96N16 626 aaKnown RBP20.2■□□□□ 0.82
SLC6A1-202ENST00000425938 RBM28Q9NW13 759 aaKnown RBP20.2■□□□□ 0.82
SLC6A1-202ENST00000425938 KIAA0355O15063 1070 aa20.19■□□□□ 0.82
SLC6A1-202ENST00000425938 EPB41L2O43491 1005 aaKnown RBP20.19■□□□□ 0.82
SLC6A1-202ENST00000425938 BLOC1S2Q6QNY1 142 aa20.19■□□□□ 0.82
SLC6A1-202ENST00000425938 TMTC3Q6ZXV5 915 aa20.19■□□□□ 0.82
SLC6A1-202ENST00000425938 FCHSD1Q86WN1 690 aa20.19■□□□□ 0.82
SLC6A1-202ENST00000425938 CMTR1Q8N1G2 835 aaKnown RBP20.19■□□□□ 0.82
SLC6A1-202ENST00000425938 PDCD2LQ9BRP1 358 aa20.19■□□□□ 0.82
SLC6A1-202ENST00000425938 SEZ6LQ9BYH1 1024 aa20.19■□□□□ 0.82
SLC6A1-202ENST00000425938 TMEM39AQ9NV64 488 aa20.19■□□□□ 0.82
SLC6A1-202ENST00000425938 POLR3EQ9NVU0 708 aa20.19■□□□□ 0.82
SLC6A1-202ENST00000425938 SNX14Q9Y5W7 946 aa20.19■□□□□ 0.82
SLC6A1-202ENST00000425938 MYH7BA7E2Y1 1941 aa20.19■□□□□ 0.82
SLC6A1-202ENST00000425938 TLR3O15455 904 aaKnown RBP20.18■□□□□ 0.82
SLC6A1-202ENST00000425938 MYCLP12524 364 aaPredicted RBP20.18■□□□□ 0.82
SLC6A1-202ENST00000425938 CDK7P50613 346 aa20.18■□□□□ 0.82
SLC6A1-202ENST00000425938 RTN1Q16799 776 aa20.18■□□□□ 0.82
SLC6A1-202ENST00000425938 CCDC82Q8N4S0 544 aa20.18■□□□□ 0.82
SLC6A1-202ENST00000425938 CUL5Q93034 780 aa20.18■□□□□ 0.82
SLC6A1-202ENST00000425938 KLF18A0A0U1RQI7 1052 aa20.17■□□□□ 0.82
SLC6A1-202ENST00000425938 KPNA6O60684 536 aa20.17■□□□□ 0.82
SLC6A1-202ENST00000425938 ARIH2O95376 493 aa20.17■□□□□ 0.82
SLC6A1-202ENST00000425938 RAG1P15918 1043 aa20.17■□□□□ 0.82
SLC6A1-202ENST00000425938 PSMA5P28066 241 aa20.17■□□□□ 0.82
SLC6A1-202ENST00000425938 FAAP100Q0VG06 881 aa20.17■□□□□ 0.82
SLC6A1-202ENST00000425938 ITGA7Q13683 1181 aa20.17■□□□□ 0.82
SLC6A1-202ENST00000425938 CCDC62Q6P9F0 684 aa20.17■□□□□ 0.82
SLC6A1-202ENST00000425938 COPS5Q92905 334 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms