RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 IQCF3P0C7M6 154 aa20.63■□□□□ 0.89
HDAC7-208ENST00000425451 GOLGA8HP0CJ92 632 aa20.63■□□□□ 0.89
HDAC7-208ENST00000425451 TXNP10599 105 aaKnown RBP20.63■□□□□ 0.89
HDAC7-208ENST00000425451 PCP11498 1178 aaKnown RBP20.63■□□□□ 0.89
HDAC7-208ENST00000425451 BRDTQ58F21 947 aaPredicted RBP20.63■□□□□ 0.89
HDAC7-208ENST00000425451 FAM47CQ5HY64 1035 aa20.63■□□□□ 0.89
HDAC7-208ENST00000425451 RGS22Q8NE09 1264 aa20.63■□□□□ 0.89
HDAC7-208ENST00000425451 CPVLQ9H3G5 476 aa20.63■□□□□ 0.89
HDAC7-208ENST00000425451 NEDD4P46934 1319 aa20.62■□□□□ 0.89
HDAC7-208ENST00000425451 RAD50Q92878 1312 aa20.62■□□□□ 0.89
HDAC7-208ENST00000425451 NCOR1O75376 2440 aa20.62■□□□□ 0.89
HDAC7-208ENST00000425451 PITPNM1O00562 1244 aa20.62■□□□□ 0.89
HDAC7-208ENST00000425451 CA3P07451 260 aa20.62■□□□□ 0.89
HDAC7-208ENST00000425451 PTPN11Q06124 597 aaPredicted RBP20.62■□□□□ 0.89
HDAC7-208ENST00000425451 TMEM67Q5HYA8 995 aa20.62■□□□□ 0.89
HDAC7-208ENST00000425451 CCDC62Q6P9F0 684 aa20.62■□□□□ 0.89
HDAC7-208ENST00000425451 TBC1D5Q92609 795 aa20.62■□□□□ 0.89
HDAC7-208ENST00000425451 ZKSCAN3Q9BRR0 538 aa20.62■□□□□ 0.89
HDAC7-208ENST00000425451 UBA5Q9GZZ9 404 aa20.62■□□□□ 0.89
HDAC7-208ENST00000425451 RFXAPO00287 272 aa20.61■□□□□ 0.89
HDAC7-208ENST00000425451 POU3F3P20264 500 aaPredicted RBP20.61■□□□□ 0.89
HDAC7-208ENST00000425451 RFC2P35250 354 aa20.61■□□□□ 0.89
HDAC7-208ENST00000425451 USH1GQ495M9 461 aa20.61■□□□□ 0.89
HDAC7-208ENST00000425451 GPATCH4Q5T3I0 446 aaKnown RBP20.61■□□□□ 0.89
HDAC7-208ENST00000425451 DGKHQ86XP1 1220 aa20.61■□□□□ 0.89
HDAC7-208ENST00000425451 CTAGE1Q96RT6 745 aa20.61■□□□□ 0.89
HDAC7-208ENST00000425451 MPHOSPH6Q99547 160 aaKnown RBP20.61■□□□□ 0.89
HDAC7-208ENST00000425451 ARHGEF15O94989 841 aa20.6■□□□□ 0.89
HDAC7-208ENST00000425451 ACTN1P12814 892 aa20.6■□□□□ 0.89
HDAC7-208ENST00000425451 PHOSPHO2Q8TCD6 241 aa20.6■□□□□ 0.89
HDAC7-208ENST00000425451 ESR2Q92731 530 aa20.6■□□□□ 0.89
HDAC7-208ENST00000425451 UHRF1Q96T88 793 aaPredicted RBP20.6■□□□□ 0.89
HDAC7-208ENST00000425451 COL20A1Q9P218 1284 aa20.6■□□□□ 0.89
HDAC7-208ENST00000425451 EPOPA6NHQ4 379 aa20.59■□□□□ 0.89
HDAC7-208ENST00000425451 BMP1P13497 986 aa20.59■□□□□ 0.89
HDAC7-208ENST00000425451 MICALL1Q8N3F8 863 aa20.59■□□□□ 0.89
HDAC7-208ENST00000425451 RETREG2Q8NC44 543 aa20.59■□□□□ 0.89
HDAC7-208ENST00000425451 TAAR1Q96RJ0 339 aa20.59■□□□□ 0.89
HDAC7-208ENST00000425451 SLC9A7Q96T83 725 aa20.59■□□□□ 0.89
HDAC7-208ENST00000425451 LNPKQ9C0E8 428 aa20.59■□□□□ 0.89
HDAC7-208ENST00000425451 RNF41Q9H4P4 317 aaPredicted RBP20.59■□□□□ 0.89
HDAC7-208ENST00000425451 CERS4Q9HA82 394 aa20.59■□□□□ 0.89
HDAC7-208ENST00000425451 MTCH2Q9Y6C9 303 aa20.59■□□□□ 0.89
HDAC7-208ENST00000425451 XIRP2A4UGR9 3374 aa20.59■□□□□ 0.89
HDAC7-208ENST00000425451 TANC1Q9C0D5 1861 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 TRIM6-TRIM34B2RNG4 842 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 B4DLN1 442 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 SDSP20132 328 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 COL9A1P20849 921 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 MRPL12P52815 198 aaKnown RBP20.58■□□□□ 0.89
HDAC7-208ENST00000425451 TFF2Q03403 129 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 TAP1Q03518 808 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 GPNMBQ14956 572 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 CDC37Q16543 378 aaPredicted RBP20.58■□□□□ 0.89
HDAC7-208ENST00000425451 LY6KQ17RY6 165 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 HERC6Q8IVU3 1022 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 PNMA1Q8ND90 353 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 TET1Q8NFU7 2136 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 SYTL5Q8TDW5 730 aaPredicted RBP20.58■□□□□ 0.89
HDAC7-208ENST00000425451 AFG1LQ8WV93 481 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 ANKS1AQ92625 1134 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 KAT2BQ92831 832 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 RILPL2Q969X0 211 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 MAF1Q9H063 256 aa20.58■□□□□ 0.89
HDAC7-208ENST00000425451 PRRC2BQ5JSZ5 2229 aaKnown RBP20.58■□□□□ 0.88
HDAC7-208ENST00000425451 MMP3P08254 477 aa20.57■□□□□ 0.88
HDAC7-208ENST00000425451 ARHGAP1Q07960 439 aa20.57■□□□□ 0.88
HDAC7-208ENST00000425451 BFSP2Q13515 415 aa20.57■□□□□ 0.88
HDAC7-208ENST00000425451 PTGISQ16647 500 aa20.57■□□□□ 0.88
HDAC7-208ENST00000425451 SEPT14Q6ZU15 432 aa20.57■□□□□ 0.88
HDAC7-208ENST00000425451 ADGRF4Q8IZF3 695 aa20.57■□□□□ 0.88
HDAC7-208ENST00000425451 FTOQ9C0B1 505 aaKnown RBP eCLIP20.57■□□□□ 0.88
HDAC7-208ENST00000425451 TSPYL2Q9H2G4 693 aaPredicted RBP20.57■□□□□ 0.88
HDAC7-208ENST00000425451 ABCB11O95342 1321 aa20.56■□□□□ 0.88
HDAC7-208ENST00000425451 ZNF213O14771 459 aa20.56■□□□□ 0.88
HDAC7-208ENST00000425451 KDM4AO75164 1064 aa20.56■□□□□ 0.88
HDAC7-208ENST00000425451 CHMP4BP1P59074 171 aa20.56■□□□□ 0.88
HDAC7-208ENST00000425451 KRT40Q6A162 431 aa20.56■□□□□ 0.88
HDAC7-208ENST00000425451 GDF6Q6KF10 455 aaPredicted RBP20.56■□□□□ 0.88
HDAC7-208ENST00000425451 SESTD1Q86VW0 696 aa20.56■□□□□ 0.88
HDAC7-208ENST00000425451 NSUN6Q8TEA1 469 aaKnown RBP20.56■□□□□ 0.88
HDAC7-208ENST00000425451 NECAB3Q96P71 396 aaPredicted RBP20.56■□□□□ 0.88
HDAC7-208ENST00000425451 NOD1Q9Y239 953 aa20.56■□□□□ 0.88
HDAC7-208ENST00000425451 GH1P01241 217 aa20.55■□□□□ 0.88
HDAC7-208ENST00000425451 KCNQ1P51787 676 aa20.55■□□□□ 0.88
HDAC7-208ENST00000425451 MFAP1P55081 439 aaKnown RBP20.55■□□□□ 0.88
HDAC7-208ENST00000425451 QRICH1Q2TAL8 776 aa20.55■□□□□ 0.88
HDAC7-208ENST00000425451 SPRED2Q7Z698 418 aa20.55■□□□□ 0.88
HDAC7-208ENST00000425451 SMC5Q8IY18 1101 aa20.55■□□□□ 0.88
HDAC7-208ENST00000425451 DHX38Q92620 1227 aaKnown RBP20.55■□□□□ 0.88
HDAC7-208ENST00000425451 IWS1Q96ST2 819 aa20.55■□□□□ 0.88
HDAC7-208ENST00000425451 BAIAP3O94812 1187 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 NT5C2P49902 561 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 STXBP2Q15833 593 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 CCDC178Q5BJE1 867 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 CHST3Q7LGC8 479 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 IQCA1Q86XH1 822 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 PLEKHM2Q8IWE5 1019 aa20.54■□□□□ 0.88
HDAC7-208ENST00000425451 ENAHQ8N8S7 591 aaPredicted RBP20.54■□□□□ 0.88
HDAC7-208ENST00000425451 IL27Q8NEV9 243 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms