RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 NSUN6Q8TEA1 469 aaKnown RBP14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 AFAP1L1Q8TED9 768 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 ARNTL2Q8WYA1 636 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 HLA-CQ95604 372 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 IWS1Q96ST2 819 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 KATNAL1Q9BW62 490 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 INCENPQ9NQS7 918 aa14.37□□□□□ -0.11
HLA-DQB3-203ENST00000425319 CUL9Q8IWT3 2517 aa14.36□□□□□ -0.11
HLA-DQB3-203ENST00000425319 MYOGP15173 224 aa14.36□□□□□ -0.11
HLA-DQB3-203ENST00000425319 NOVP48745 357 aa14.36□□□□□ -0.11
HLA-DQB3-203ENST00000425319 DGKDQ16760 1214 aa14.36□□□□□ -0.11
HLA-DQB3-203ENST00000425319 DGKHQ86XP1 1220 aa14.36□□□□□ -0.11
HLA-DQB3-203ENST00000425319 HERC6Q8IVU3 1022 aa14.36□□□□□ -0.11
HLA-DQB3-203ENST00000425319 PURBQ96QR8 312 aaKnown RBP14.36□□□□□ -0.11
HLA-DQB3-203ENST00000425319 KAT14Q9H8E8 782 aa14.36□□□□□ -0.11
HLA-DQB3-203ENST00000425319 LMCD1Q9NZU5 365 aa14.36□□□□□ -0.11
HLA-DQB3-203ENST00000425319 MRPL11Q9Y3B7 192 aaKnown RBP14.36□□□□□ -0.11
HLA-DQB3-203ENST00000425319 PDHBP11177 359 aa14.35□□□□□ -0.11
HLA-DQB3-203ENST00000425319 BMP1P13497 986 aa14.35□□□□□ -0.11
HLA-DQB3-203ENST00000425319 ZNF543Q08ER8 600 aa14.35□□□□□ -0.11
HLA-DQB3-203ENST00000425319 IKBKEQ14164 716 aa14.35□□□□□ -0.11
HLA-DQB3-203ENST00000425319 USH1GQ495M9 461 aa14.35□□□□□ -0.11
HLA-DQB3-203ENST00000425319 ARHGEF16Q5VV41 709 aa14.35□□□□□ -0.11
HLA-DQB3-203ENST00000425319 KCNV1Q6PIU1 500 aa14.35□□□□□ -0.11
HLA-DQB3-203ENST00000425319 RILPL2Q969X0 211 aa14.35□□□□□ -0.11
HLA-DQB3-203ENST00000425319 CERS4Q9HA82 394 aa14.35□□□□□ -0.11
HLA-DQB3-203ENST00000425319 HCN4Q9Y3Q4 1203 aa14.35□□□□□ -0.11
HLA-DQB3-203ENST00000425319 MTCH2Q9Y6C9 303 aa14.35□□□□□ -0.11
HLA-DQB3-203ENST00000425319 ABCB11O95342 1321 aa14.35□□□□□ -0.11
HLA-DQB3-203ENST00000425319 PARP14Q460N5 1801 aa14.34□□□□□ -0.11
HLA-DQB3-203ENST00000425319 ABHD14A-ACY1A0A1B0GW23 586 aa14.34□□□□□ -0.11
HLA-DQB3-203ENST00000425319 SELPP16109 830 aa14.34□□□□□ -0.11
HLA-DQB3-203ENST00000425319 SLC30A10Q6XR72 485 aa14.34□□□□□ -0.11
HLA-DQB3-203ENST00000425319 SEPT14Q6ZU15 432 aa14.34□□□□□ -0.11
HLA-DQB3-203ENST00000425319 CLEC4DQ8WXI8 215 aa14.34□□□□□ -0.11
HLA-DQB3-203ENST00000425319 DDX49Q9Y6V7 483 aaKnown RBP14.34□□□□□ -0.11
HLA-DQB3-203ENST00000425319 EIF3JO75822 258 aaKnown RBP14.33□□□□□ -0.12
HLA-DQB3-203ENST00000425319 HSPD1P10809 573 aaKnown RBP14.33□□□□□ -0.12
HLA-DQB3-203ENST00000425319 EDNRBP24530 442 aa14.33□□□□□ -0.12
HLA-DQB3-203ENST00000425319 LAMC2Q13753 1193 aa14.33□□□□□ -0.12
HLA-DQB3-203ENST00000425319 TMEM63BQ5T3F8 832 aa14.33□□□□□ -0.12
HLA-DQB3-203ENST00000425319 VPS53Q5VIR6 699 aa14.33□□□□□ -0.12
HLA-DQB3-203ENST00000425319 CNKSR3Q6P9H4 555 aa14.33□□□□□ -0.12
HLA-DQB3-203ENST00000425319 CHST3Q7LGC8 479 aa14.33□□□□□ -0.12
HLA-DQB3-203ENST00000425319 DHX37Q8IY37 1157 aaKnown RBP14.33□□□□□ -0.12
HLA-DQB3-203ENST00000425319 RMDN3Q96TC7 470 aa14.33□□□□□ -0.12
HLA-DQB3-203ENST00000425319 MAP3K20Q9NYL2 800 aaKnown RBP14.33□□□□□ -0.12
HLA-DQB3-203ENST00000425319 CTNNA3Q9UI47 895 aa14.33□□□□□ -0.12
HLA-DQB3-203ENST00000425319 DNAH12Q6ZR08 3092 aa14.33□□□□□ -0.12
HLA-DQB3-203ENST00000425319 HIP1O00291 1037 aa14.32□□□□□ -0.12
HLA-DQB3-203ENST00000425319 PDE1AP54750 535 aa14.32□□□□□ -0.12
HLA-DQB3-203ENST00000425319 HAND2P61296 217 aa14.32□□□□□ -0.12
HLA-DQB3-203ENST00000425319 TAP1Q03518 808 aa14.32□□□□□ -0.12
HLA-DQB3-203ENST00000425319 ASPRV1Q53RT3 343 aa14.32□□□□□ -0.12
HLA-DQB3-203ENST00000425319 LRRC8DQ7L1W4 858 aa14.32□□□□□ -0.12
HLA-DQB3-203ENST00000425319 SESTD1Q86VW0 696 aa14.32□□□□□ -0.12
HLA-DQB3-203ENST00000425319 FBXO11Q86XK2 927 aa14.32□□□□□ -0.12
HLA-DQB3-203ENST00000425319 SAMD3Q8N6K7 520 aa14.32□□□□□ -0.12
HLA-DQB3-203ENST00000425319 AFG1LQ8WV93 481 aa14.32□□□□□ -0.12
HLA-DQB3-203ENST00000425319 RAD9AQ99638 391 aa14.32□□□□□ -0.12
HLA-DQB3-203ENST00000425319 PCDHB15Q9Y5E8 787 aa14.32□□□□□ -0.12
HLA-DQB3-203ENST00000425319 ZMYM6O95789 1325 aa14.32□□□□□ -0.12
HLA-DQB3-203ENST00000425319 MYH7P12883 1935 aa14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 GREB1LQ9C091 1923 aaPredicted RBP14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 RFXAPO00287 272 aa14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 PTGS1P23219 599 aa14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 TFF2Q03403 129 aa14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 PTK7Q13308 1070 aa14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 AAMPQ13685 434 aa14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 CDC37Q16543 378 aaPredicted RBP14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 PNMA1Q8ND90 353 aa14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 OTUD7AQ8TE49 926 aaPredicted RBP14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 COPS5Q92905 334 aa14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 TGS1Q96RS0 853 aaKnown RBP14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 ALG1Q9BT22 464 aa14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 KRT23Q9C075 422 aa14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 UBA5Q9GZZ9 404 aa14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 VAT1LQ9HCJ6 419 aa14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 ARIH1Q9Y4X5 557 aaPredicted RBP14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 MRVI1Q9Y6F6 885 aa14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 CCDC171Q6TFL3 1326 aa14.31□□□□□ -0.12
HLA-DQB3-203ENST00000425319 PPFIA4O75335 1185 aa14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 AMHP03971 560 aa14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 MMP3P08254 477 aa14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 PARP1P09874 1014 aaKnown RBP14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 GOLGA8HP0CJ92 632 aa14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 SNHG28P0DPA3 235 aa14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 IMMTQ16891 758 aaKnown RBP14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 LY6KQ17RY6 165 aa14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 TMEM31Q5JXX7 168 aa14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 TAAR1Q96RJ0 339 aa14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 UBAC1Q9BSL1 405 aa14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 CNNM2Q9H8M5 875 aa14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 DIAPH3Q9NSV4 1193 aa14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 INSL6Q9Y581 213 aa14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 MYH4Q9Y623 1939 aa14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 EMSYQ7Z589 1322 aa14.3□□□□□ -0.12
HLA-DQB3-203ENST00000425319 CFBP00751 764 aa14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 NR3C2P08235 984 aa14.29□□□□□ -0.12
HLA-DQB3-203ENST00000425319 PLA2G5P39877 138 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms