RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 SHCBP1Q8NEM2 672 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 TBC1D5Q92609 795 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 MPHOSPH6Q99547 160 aaKnown RBP11.74□□□□□ -0.53
MDC1-205ENST00000425072 PAGR1Q9BTK6 254 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 ANO3Q9BYT9 981 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 GDPD2Q9HCC8 539 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 HOMER2Q9NSB8 354 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 BTBD7Q9P203 1132 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 RIPK3Q9Y572 518 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 PARP14Q460N5 1801 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 MYH15Q9Y2K3 1946 aa11.74□□□□□ -0.53
MDC1-205ENST00000425072 PFASO15067 1338 aa11.73□□□□□ -0.53
MDC1-205ENST00000425072 COL11A1P12107 1806 aaPredicted RBP11.73□□□□□ -0.53
MDC1-205ENST00000425072 HOXA13P31271 388 aaPredicted RBP11.73□□□□□ -0.53
MDC1-205ENST00000425072 CIITAP33076 1130 aa11.73□□□□□ -0.53
MDC1-205ENST00000425072 MCM7P33993 719 aa11.73□□□□□ -0.53
MDC1-205ENST00000425072 SREBF1P36956 1147 aa11.73□□□□□ -0.53
MDC1-205ENST00000425072 RPS6P62753 249 aaKnown RBP11.73□□□□□ -0.53
MDC1-205ENST00000425072 PTGDRQ13258 359 aa11.73□□□□□ -0.53
MDC1-205ENST00000425072 BAATQ14032 418 aaPredicted RBP11.73□□□□□ -0.53
MDC1-205ENST00000425072 PTPAQ15257 358 aa11.73□□□□□ -0.53
MDC1-205ENST00000425072 MUM1L1Q5H9M0 696 aa11.73□□□□□ -0.53
MDC1-205ENST00000425072 NSMFQ6X4W1 530 aa11.73□□□□□ -0.53
MDC1-205ENST00000425072 DTHD1Q6ZMT9 781 aa11.73□□□□□ -0.53
MDC1-205ENST00000425072 NCAPG2Q86XI2 1143 aa11.73□□□□□ -0.53
MDC1-205ENST00000425072 IFNL1Q8IU54 200 aa11.73□□□□□ -0.53
MDC1-205ENST00000425072 FAM43AQ8N2R8 423 aa11.73□□□□□ -0.53
MDC1-205ENST00000425072 KRI1Q8N9T8 703 aaKnown RBP11.73□□□□□ -0.53
MDC1-205ENST00000425072 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
MDC1-205ENST00000425072 NSUN6Q8TEA1 469 aaKnown RBP11.73□□□□□ -0.53
MDC1-205ENST00000425072 PTPN18Q99952 460 aa11.73□□□□□ -0.53
MDC1-205ENST00000425072 MOV10L1Q9BXT6 1211 aaKnown RBP11.73□□□□□ -0.53
MDC1-205ENST00000425072 ZFYVE28Q9HCC9 887 aa11.73□□□□□ -0.53
MDC1-205ENST00000425072 PCDHA7Q9UN72 937 aa11.73□□□□□ -0.53
MDC1-205ENST00000425072 SRPRBQ9Y5M8 271 aaKnown RBP11.73□□□□□ -0.53
MDC1-205ENST00000425072 DDX49Q9Y6V7 483 aaKnown RBP11.73□□□□□ -0.53
MDC1-205ENST00000425072 A0A1W2PQ27 194 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 A0A1W2PQ64 194 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 A0A1W2PQD8 194 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 FAM205CA6NFA0 338 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 RASSF10A6NK89 507 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 FAM155AB1AL88 458 aaPredicted RBP11.72□□□□□ -0.53
MDC1-205ENST00000425072 NFIBO00712 420 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 ADAMTS3O15072 1205 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 TRAK2O60296 914 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 CYP2C8P10632 490 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 PTPREP23469 700 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 CMA1P23946 247 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 PRPHP41219 470 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 ERVK-9P63128 1117 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 ERVK-24P63145 666 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 ARHGAP4P98171 946 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 Q3C1V9 767 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 ARHGEF16Q5VV41 709 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.72□□□□□ -0.53
MDC1-205ENST00000425072 DNERQ8NFT8 737 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 SYTL5Q8TDW5 730 aaPredicted RBP11.72□□□□□ -0.53
MDC1-205ENST00000425072 CHAMP1Q96JM3 812 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 IWS1Q96ST2 819 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 RMDN3Q96TC7 470 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 RAB34Q9BZG1 259 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 MORF4L1Q9UBU8 362 aa11.72□□□□□ -0.53
MDC1-205ENST00000425072 ADD3Q9UEY8 706 aaKnown RBP11.72□□□□□ -0.53
MDC1-205ENST00000425072 LOC102724159A0A0B4J2E5 919 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 TBX3O15119 743 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 MAFGO15525 162 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 NEMFO60524 1076 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 CNMDO75829 334 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 STAM2O75886 525 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 FCER1AP12319 257 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 ERCC3P19447 782 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 MARCKSP29966 332 aaPredicted RBP11.71□□□□□ -0.53
MDC1-205ENST00000425072 MAP2K2P36507 400 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 ATP2C1P98194 919 aaPredicted RBP11.71□□□□□ -0.53
MDC1-205ENST00000425072 PDIA5Q14554 519 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 KCTD2Q14681 263 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 PWP2Q15269 919 aaKnown RBP11.71□□□□□ -0.53
MDC1-205ENST00000425072 TAF1CQ15572 869 aaPredicted RBP11.71□□□□□ -0.53
MDC1-205ENST00000425072 Q4G0T1 1027 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 NOM1Q5C9Z4 860 aaKnown RBP11.71□□□□□ -0.53
MDC1-205ENST00000425072 SLFN12Q8IYM2 578 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 ANKRD13CQ8N6S4 541 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 C4orf32Q8N8J7 132 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 TAAR1Q96RJ0 339 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 FAM13BQ9NYF5 915 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 CYP39A1Q9NYL5 469 aa11.71□□□□□ -0.53
MDC1-205ENST00000425072 DDX25Q9UHL0 483 aaKnown RBP11.71□□□□□ -0.53
MDC1-205ENST00000425072 POTEB2H3BUK9 544 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 MAPK4P31152 587 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 LONP1P36776 959 aaKnown RBP11.7□□□□□ -0.54
MDC1-205ENST00000425072 RGS19P49795 217 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 CALCRLQ16602 461 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 FAM110CQ1W6H9 321 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 TMEM266Q2M3C6 531 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 KLHL40Q2TBA0 621 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 PCNX4Q63HM2 1172 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 POTEEQ6S8J3 1075 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 NIPA1Q7RTP0 329 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 ABRAQ8N0Z2 381 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 CRYGNQ8WXF5 182 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms