RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 CSRNP2Q9H175 543 aa16.98■□□□□ 0.31
CALD1-206ENST00000424922 TMEM60Q9H2L4 133 aa16.98■□□□□ 0.31
CALD1-206ENST00000424922 SPTLC3Q9NUV7 552 aa16.98■□□□□ 0.31
CALD1-206ENST00000424922 VWA3AA6NCI4 1184 aa16.97■□□□□ 0.31
CALD1-206ENST00000424922 UNCXA6NJT0 531 aa16.97■□□□□ 0.31
CALD1-206ENST00000424922 SPDYE16A6NNV3 312 aaPredicted RBP16.97■□□□□ 0.31
CALD1-206ENST00000424922 GOLGA6L19H0YKK7 550 aa16.97■□□□□ 0.31
CALD1-206ENST00000424922 GCOM1H8Y6P7 765 aaPredicted RBP16.97■□□□□ 0.31
CALD1-206ENST00000424922 ITGBL1O95965 494 aaPredicted RBP16.97■□□□□ 0.31
CALD1-206ENST00000424922 POLR2MP0CAP2 368 aa16.97■□□□□ 0.31
CALD1-206ENST00000424922 PFKFB1P16118 471 aa16.97■□□□□ 0.31
CALD1-206ENST00000424922 MCTP2Q6DN12 878 aa16.97■□□□□ 0.31
CALD1-206ENST00000424922 C11orf57Q6ZUT1 292 aaPredicted RBP16.97■□□□□ 0.31
CALD1-206ENST00000424922 FCHSD1Q86WN1 690 aa16.97■□□□□ 0.31
CALD1-206ENST00000424922 SDF4Q9BRK5 362 aa16.97■□□□□ 0.31
CALD1-206ENST00000424922 NAT10Q9H0A0 1025 aaKnown RBP16.97■□□□□ 0.31
CALD1-206ENST00000424922 PRDM4Q9UKN5 801 aa16.97■□□□□ 0.31
CALD1-206ENST00000424922 TDP2O95551 362 aa16.97■□□□□ 0.31
CALD1-206ENST00000424922 FOSP01100 380 aaPredicted RBP16.97■□□□□ 0.31
CALD1-206ENST00000424922 CEP57L1Q8IYX8 460 aa16.97■□□□□ 0.31
CALD1-206ENST00000424922 ZNF579Q8NAF0 562 aaKnown RBP16.97■□□□□ 0.31
CALD1-206ENST00000424922 REPS2Q8NFH8 660 aa16.97■□□□□ 0.31
CALD1-206ENST00000424922 KIAA1468Q9P260 1216 aa16.97■□□□□ 0.31
CALD1-206ENST00000424922 MYPNQ86TC9 1320 aa16.96■□□□□ 0.31
CALD1-206ENST00000424922 NFIBO00712 420 aa16.96■□□□□ 0.31
CALD1-206ENST00000424922 NEMFO60524 1076 aa16.96■□□□□ 0.31
CALD1-206ENST00000424922 HOXA7P31268 230 aaPredicted RBP16.96■□□□□ 0.31
CALD1-206ENST00000424922 IL17AQ16552 155 aa16.96■□□□□ 0.31
CALD1-206ENST00000424922 MUM1L1Q5H9M0 696 aa16.96■□□□□ 0.31
CALD1-206ENST00000424922 CST9Q5W186 159 aa16.96■□□□□ 0.31
CALD1-206ENST00000424922 ARL6IP4Q66PJ3 421 aaKnown RBP16.96■□□□□ 0.31
CALD1-206ENST00000424922 CLEC4DQ8WXI8 215 aa16.96■□□□□ 0.31
CALD1-206ENST00000424922 ZNF830Q96NB3 372 aaPredicted RBP16.96■□□□□ 0.31
CALD1-206ENST00000424922 BPIFA3Q9BQP9 254 aa16.96■□□□□ 0.31
CALD1-206ENST00000424922 TRIM5Q9C035 493 aa16.96■□□□□ 0.31
CALD1-206ENST00000424922 ZNF202O95125 648 aa16.96■□□□□ 0.3
CALD1-206ENST00000424922 NOLC1Q14978 699 aaKnown RBP eCLIP16.96■□□□□ 0.3
CALD1-206ENST00000424922 TMEM132BQ14DG7 1078 aa16.96■□□□□ 0.3
CALD1-206ENST00000424922 SNRNP48Q6IEG0 339 aaKnown RBP16.96■□□□□ 0.3
CALD1-206ENST00000424922 TRERF1Q96PN7 1200 aa16.96■□□□□ 0.3
CALD1-206ENST00000424922 PNMA2Q9UL42 364 aa16.96■□□□□ 0.3
CALD1-206ENST00000424922 ZNF214Q9UL59 606 aaPredicted RBP16.96■□□□□ 0.3
CALD1-206ENST00000424922 HPSEQ9Y251 543 aa16.96■□□□□ 0.3
CALD1-206ENST00000424922 RIPK3Q9Y572 518 aa16.96■□□□□ 0.3
CALD1-206ENST00000424922 A0A0G2JMZ2 1700 aa16.95■□□□□ 0.3
CALD1-206ENST00000424922 LAD1O00515 517 aa16.95■□□□□ 0.3
CALD1-206ENST00000424922 SLC37A4O43826 429 aa16.95■□□□□ 0.3
CALD1-206ENST00000424922 ORC2Q13416 577 aaPredicted RBP16.95■□□□□ 0.3
CALD1-206ENST00000424922 SNAPC2Q13487 334 aa16.95■□□□□ 0.3
CALD1-206ENST00000424922 MOGSQ13724 837 aa16.95■□□□□ 0.3
CALD1-206ENST00000424922 FASTKD5Q7L8L6 764 aaKnown RBP16.95■□□□□ 0.3
CALD1-206ENST00000424922 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
CALD1-206ENST00000424922 TEX2Q8IWB9 1127 aa16.95■□□□□ 0.3
CALD1-206ENST00000424922 MRFAP1L1Q96HT8 127 aa16.95■□□□□ 0.3
CALD1-206ENST00000424922 KCNF1Q9H3M0 494 aa16.95■□□□□ 0.3
CALD1-206ENST00000424922 AGTPBP1Q9UPW5 1226 aa16.95■□□□□ 0.3
CALD1-206ENST00000424922 OR52Z1P0C646 297 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 USP11P51784 963 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 OAZ1P54368 228 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 IRX3P78415 501 aaPredicted RBP16.94■□□□□ 0.3
CALD1-206ENST00000424922 ARHGAP4P98171 946 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 MKRN3Q13064 507 aaKnown RBP16.94■□□□□ 0.3
CALD1-206ENST00000424922 PLS1Q14651 629 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 PPP4R3AQ6IN85 833 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 DTHD1Q6ZMT9 781 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 USP49Q70CQ1 688 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 MCF2L2Q86YR7 1114 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 SPC24Q8NBT2 197 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 KIAA1524Q8TCG1 905 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 CRYGNQ8WXF5 182 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 FAM13BQ9NYF5 915 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 DDX25Q9UHL0 483 aaKnown RBP16.94■□□□□ 0.3
CALD1-206ENST00000424922 SREBF1P36956 1147 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 SYKP43405 635 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 HSD17B4P51659 736 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 DHX40Q8IX18 779 aaKnown RBP16.94■□□□□ 0.3
CALD1-206ENST00000424922 EPSTI1Q96J88 318 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 ASCC2Q9H1I8 757 aaPredicted RBP16.94■□□□□ 0.3
CALD1-206ENST00000424922 KCNH3Q9ULD8 1083 aa16.94■□□□□ 0.3
CALD1-206ENST00000424922 BECN2A8MW95 431 aa16.93■□□□□ 0.3
CALD1-206ENST00000424922 ATP2A1O14983 1001 aa16.93■□□□□ 0.3
CALD1-206ENST00000424922 PRPHP41219 470 aa16.93■□□□□ 0.3
CALD1-206ENST00000424922 CALCRLQ16602 461 aa16.93■□□□□ 0.3
CALD1-206ENST00000424922 POTEEQ6S8J3 1075 aa16.93■□□□□ 0.3
CALD1-206ENST00000424922 ELOA2Q8IYF1 753 aaPredicted RBP16.93■□□□□ 0.3
CALD1-206ENST00000424922 TEX13BQ9BXU2 312 aa16.93■□□□□ 0.3
CALD1-206ENST00000424922 GPBP1L1Q9HC44 474 aaPredicted RBP16.93■□□□□ 0.3
CALD1-206ENST00000424922 RNF146Q9NTX7 359 aa16.93■□□□□ 0.3
CALD1-206ENST00000424922 R3HCC1Q9Y3T6 440 aaKnown RBP16.93■□□□□ 0.3
CALD1-206ENST00000424922 GCFC2P16383 781 aaKnown RBP16.93■□□□□ 0.3
CALD1-206ENST00000424922 STAT3P40763 770 aa16.93■□□□□ 0.3
CALD1-206ENST00000424922 GPAT2Q6NUI2 795 aa16.93■□□□□ 0.3
CALD1-206ENST00000424922 SYMPKQ92797 1274 aaKnown RBP16.93■□□□□ 0.3
CALD1-206ENST00000424922 NAP1L4Q99733 375 aaKnown RBP16.93■□□□□ 0.3
CALD1-206ENST00000424922 PEX10O60683 326 aa16.92■□□□□ 0.3
CALD1-206ENST00000424922 NLRP12P59046 1061 aa16.92■□□□□ 0.3
CALD1-206ENST00000424922 ZRSR1Q15695 479 aaKnown RBP16.92■□□□□ 0.3
CALD1-206ENST00000424922 LBX2Q6XYB7 198 aa16.92■□□□□ 0.3
CALD1-206ENST00000424922 MTMR9Q96QG7 549 aa16.92■□□□□ 0.3
CALD1-206ENST00000424922 COL20A1Q9P218 1284 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms