RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 GPHNQ9NQX3 736 aaPredicted RBP21.59■■□□□ 1.05
SREBF1-206ENST00000423161 MYH7BA7E2Y1 1941 aa21.59■■□□□ 1.05
SREBF1-206ENST00000423161 IFIT1BQ5T764 474 aaKnown RBP21.58■■□□□ 1.05
SREBF1-206ENST00000423161 TBC1D5Q92609 795 aa21.58■■□□□ 1.05
SREBF1-206ENST00000423161 COPS5Q92905 334 aa21.58■■□□□ 1.05
SREBF1-206ENST00000423161 MTG1Q9BT17 334 aaPredicted RBP21.58■■□□□ 1.05
SREBF1-206ENST00000423161 MAF1Q9H063 256 aa21.58■■□□□ 1.05
SREBF1-206ENST00000423161 WNT8AQ9H1J5 351 aa21.58■■□□□ 1.05
SREBF1-206ENST00000423161 CDH23Q9H251 3354 aa21.58■■□□□ 1.04
SREBF1-206ENST00000423161 TANC1Q9C0D5 1861 aa21.58■■□□□ 1.04
SREBF1-206ENST00000423161 PRUNE2Q8WUY3 3088 aa21.57■■□□□ 1.04
SREBF1-206ENST00000423161 GRXCR1A8MXD5 290 aa21.57■■□□□ 1.04
SREBF1-206ENST00000423161 FGBP02675 491 aa21.57■■□□□ 1.04
SREBF1-206ENST00000423161 TXNP10599 105 aaKnown RBP21.57■■□□□ 1.04
SREBF1-206ENST00000423161 FBXO11Q86XK2 927 aa21.57■■□□□ 1.04
SREBF1-206ENST00000423161 HERVK_113Q902F9 699 aa21.57■■□□□ 1.04
SREBF1-206ENST00000423161 PBX4Q9BYU1 374 aa21.57■■□□□ 1.04
SREBF1-206ENST00000423161 MTIF3Q9H2K0 278 aaKnown RBP21.57■■□□□ 1.04
SREBF1-206ENST00000423161 ZNF576Q9H609 170 aa21.57■■□□□ 1.04
SREBF1-206ENST00000423161 JMJD4Q9H9V9 463 aa21.57■■□□□ 1.04
SREBF1-206ENST00000423161 VAT1LQ9HCJ6 419 aa21.57■■□□□ 1.04
SREBF1-206ENST00000423161 BAZ2BQ9UIF8 2168 aaKnown RBP21.57■■□□□ 1.04
SREBF1-206ENST00000423161 TRIP12Q14669 1992 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-206ENST00000423161 ARIH2O95376 493 aa21.56■■□□□ 1.04
SREBF1-206ENST00000423161 SUPT20HL2P0C7V6 817 aa21.56■■□□□ 1.04
SREBF1-206ENST00000423161 PBX2P40425 430 aa21.56■■□□□ 1.04
SREBF1-206ENST00000423161 TTLL4Q14679 1199 aa21.56■■□□□ 1.04
SREBF1-206ENST00000423161 GRIN2CQ14957 1233 aa21.56■■□□□ 1.04
SREBF1-206ENST00000423161 FAM47CQ5HY64 1035 aa21.56■■□□□ 1.04
SREBF1-206ENST00000423161 MCF2L2Q86YR7 1114 aa21.56■■□□□ 1.04
SREBF1-206ENST00000423161 SYTL5Q8TDW5 730 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-206ENST00000423161 TAAR1Q96RJ0 339 aa21.56■■□□□ 1.04
SREBF1-206ENST00000423161 TRMT13Q9NUP7 481 aaKnown RBP21.56■■□□□ 1.04
SREBF1-206ENST00000423161 COL20A1Q9P218 1284 aa21.56■■□□□ 1.04
SREBF1-206ENST00000423161 MRPL11Q9Y3B7 192 aaKnown RBP21.56■■□□□ 1.04
SREBF1-206ENST00000423161 A6NJR5 290 aa21.55■■□□□ 1.04
SREBF1-206ENST00000423161 CYP2C9P11712 490 aa21.55■■□□□ 1.04
SREBF1-206ENST00000423161 SEC23AQ15436 765 aa21.55■■□□□ 1.04
SREBF1-206ENST00000423161 NBPF20Q3BBV1 942 aa21.55■■□□□ 1.04
SREBF1-206ENST00000423161 CYB5R4Q7L1T6 521 aa21.55■■□□□ 1.04
SREBF1-206ENST00000423161 STAG2Q8N3U4 1231 aa21.55■■□□□ 1.04
SREBF1-206ENST00000423161 NSUN6Q8TEA1 469 aaKnown RBP21.55■■□□□ 1.04
SREBF1-206ENST00000423161 SCLYQ96I15 445 aa21.55■■□□□ 1.04
SREBF1-206ENST00000423161 CXXC1Q9P0U4 656 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-206ENST00000423161 KPNA6O60684 536 aa21.54■■□□□ 1.04
SREBF1-206ENST00000423161 TRDNQ13061 729 aa21.54■■□□□ 1.04
SREBF1-206ENST00000423161 OTOP2Q7RTS6 562 aa21.54■■□□□ 1.04
SREBF1-206ENST00000423161 RUFY2Q8WXA3 655 aa21.54■■□□□ 1.04
SREBF1-206ENST00000423161 RMDN3Q96TC7 470 aa21.54■■□□□ 1.04
SREBF1-206ENST00000423161 KLRF2D3W0D1 207 aa21.53■■□□□ 1.04
SREBF1-206ENST00000423161 CCDC62Q6P9F0 684 aa21.53■■□□□ 1.04
SREBF1-206ENST00000423161 SEPT14Q6ZU15 432 aa21.53■■□□□ 1.04
SREBF1-206ENST00000423161 RPUSD2Q8IZ73 545 aaKnown RBP21.53■■□□□ 1.04
SREBF1-206ENST00000423161 PPP1R13LQ8WUF5 828 aa21.53■■□□□ 1.04
SREBF1-206ENST00000423161 IWS1Q96ST2 819 aa21.53■■□□□ 1.04
SREBF1-206ENST00000423161 CHD9Q3L8U1 2897 aa21.53■■□□□ 1.04
SREBF1-206ENST00000423161 CFBP00751 764 aa21.52■■□□□ 1.04
SREBF1-206ENST00000423161 CHMLP26374 656 aa21.52■■□□□ 1.04
SREBF1-206ENST00000423161 IRX6P78412 446 aaPredicted RBP21.52■■□□□ 1.04
SREBF1-206ENST00000423161 PTH1RQ03431 593 aa21.52■■□□□ 1.04
SREBF1-206ENST00000423161 RAB30Q15771 203 aa21.52■■□□□ 1.04
SREBF1-206ENST00000423161 STXBP2Q15833 593 aa21.52■■□□□ 1.04
SREBF1-206ENST00000423161 ARHGEF16Q5VV41 709 aa21.52■■□□□ 1.04
SREBF1-206ENST00000423161 NFRKBQ6P4R8 1299 aa21.52■■□□□ 1.04
SREBF1-206ENST00000423161 AMNQ9BXJ7 453 aa21.52■■□□□ 1.04
SREBF1-206ENST00000423161 COL25A1Q9BXS0 654 aaPredicted RBP21.52■■□□□ 1.04
SREBF1-206ENST00000423161 MAD2L2Q9UI95 211 aa21.52■■□□□ 1.04
SREBF1-206ENST00000423161 MSRAQ9UJ68 235 aa21.52■■□□□ 1.04
SREBF1-206ENST00000423161 U3KPZ7 1027 aaPredicted RBP21.52■■□□□ 1.04
SREBF1-206ENST00000423161 GH1P01241 217 aa21.51■■□□□ 1.03
SREBF1-206ENST00000423161 CYP21A2P08686 494 aa21.51■■□□□ 1.03
SREBF1-206ENST00000423161 EIF2AK2P19525 551 aaKnown RBP21.51■■□□□ 1.03
SREBF1-206ENST00000423161 LY6KQ17RY6 165 aa21.51■■□□□ 1.03
SREBF1-206ENST00000423161 AFG1LQ8WV93 481 aa21.51■■□□□ 1.03
SREBF1-206ENST00000423161 TET1Q8NFU7 2136 aa21.5■■□□□ 1.03
SREBF1-206ENST00000423161 ZBTB5O15062 677 aa21.5■■□□□ 1.03
SREBF1-206ENST00000423161 MMP3P08254 477 aa21.5■■□□□ 1.03
SREBF1-206ENST00000423161 CHMP4BP1P59074 171 aa21.5■■□□□ 1.03
SREBF1-206ENST00000423161 PTPN11Q06124 597 aaPredicted RBP21.5■■□□□ 1.03
SREBF1-206ENST00000423161 CHST3Q7LGC8 479 aa21.5■■□□□ 1.03
SREBF1-206ENST00000423161 VWCEQ96DN2 955 aa21.5■■□□□ 1.03
SREBF1-206ENST00000423161 MTMR8Q96EF0 704 aa21.5■■□□□ 1.03
SREBF1-206ENST00000423161 GAS2L1Q99501 681 aaPredicted RBP21.5■■□□□ 1.03
SREBF1-206ENST00000423161 PXMP2Q9NR77 195 aa21.5■■□□□ 1.03
SREBF1-206ENST00000423161 PALM3A6NDB9 673 aaPredicted RBP21.49■■□□□ 1.03
SREBF1-206ENST00000423161 ZBBXA8MT70 800 aa21.49■■□□□ 1.03
SREBF1-206ENST00000423161 OPLAHO14841 1288 aa21.49■■□□□ 1.03
SREBF1-206ENST00000423161 IFIT3O14879 490 aaKnown RBP21.49■■□□□ 1.03
SREBF1-206ENST00000423161 PPP1R11O60927 126 aaPredicted RBP21.49■■□□□ 1.03
SREBF1-206ENST00000423161 PFKMP08237 780 aa21.49■■□□□ 1.03
SREBF1-206ENST00000423161 HSD17B4P51659 736 aa21.49■■□□□ 1.03
SREBF1-206ENST00000423161 ARHGAP1Q07960 439 aa21.49■■□□□ 1.03
SREBF1-206ENST00000423161 DEFB128Q7Z7B8 93 aa21.49■■□□□ 1.03
SREBF1-206ENST00000423161 RALYLQ86SE5 291 aaKnown RBP21.49■■□□□ 1.03
SREBF1-206ENST00000423161 NKX2-4Q9H2Z4 354 aa21.49■■□□□ 1.03
SREBF1-206ENST00000423161 PRDM12Q9H4Q4 367 aa21.49■■□□□ 1.03
SREBF1-206ENST00000423161 PCDHA1Q9Y5I3 950 aa21.49■■□□□ 1.03
SREBF1-206ENST00000423161 SLC4A7Q9Y6M7 1214 aa21.49■■□□□ 1.03
SREBF1-206ENST00000423161 ERICH2A1L162 156 aa21.48■■□□□ 1.03
SREBF1-206ENST00000423161 NR3C2P08235 984 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms