RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, human

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-208	ENST00000422704	GOLPH3L	Q9H4A5	285 aa		11.65	□□□□□ -0.54
SEMA4D-208	ENST00000422704	EPB41L5	Q9HCM4	733 aa		11.65	□□□□□ -0.54
SEMA4D-208	ENST00000422704	DNAJC17	Q9NVM6	304 aa	Known RBP	11.65	□□□□□ -0.54
SEMA4D-208	ENST00000422704	HYOU1	Q9Y4L1	999 aa		11.65	□□□□□ -0.54
SEMA4D-208	ENST00000422704	NCAPD2	Q15021	1401 aa		11.65	□□□□□ -0.54
SEMA4D-208	ENST00000422704	MED23	Q9ULK4	1368 aa		11.65	□□□□□ -0.54
SEMA4D-208	ENST00000422704	PSD	A5PKW4	1024 aa	Predicted RBP	11.65	□□□□□ -0.55
SEMA4D-208	ENST00000422704	MMP1	P03956	469 aa		11.65	□□□□□ -0.55
SEMA4D-208	ENST00000422704	ALDH3A1	P30838	453 aa		11.65	□□□□□ -0.55
SEMA4D-208	ENST00000422704	LACTB	P83111	547 aa	Predicted RBP	11.65	□□□□□ -0.55
SEMA4D-208	ENST00000422704	SUSD4	Q5VX71	490 aa		11.65	□□□□□ -0.55
SEMA4D-208	ENST00000422704	SRGAP1	Q7Z6B7	1085 aa		11.65	□□□□□ -0.55
SEMA4D-208	ENST00000422704	SH2B2	O14492	632 aa	Predicted RBP	11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	MIER3	Q7Z3K6	550 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	NLRX1	Q86UT6	975 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	NT5C3A	Q9H0P0	336 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704		K7ENM7	598 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	CYP2E1	P05181	493 aa	Predicted RBP	11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	ATP2A2	P16615	1042 aa	Known RBP	11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	TMOD1	P28289	359 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	C2orf54	Q08AI8	447 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	EXOC3L4	Q17RC7	722 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	WHAMMP3	Q1A5X7	153 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	HHAT	Q5VTY9	493 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	DENND2C	Q68D51	928 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	FBXO11	Q86XK2	927 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	TBC1D10C	Q8IV04	446 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	MPHOSPH6	Q99547	160 aa	Known RBP	11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	RNF26	Q9BY78	433 aa	Predicted RBP	11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	CLTA	P09496	248 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	PLA2G4D	Q86XP0	818 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	FAM133A	Q8N9E0	248 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	PLEKHG2	Q9H7P9	1386 aa		11.64	□□□□□ -0.55
SEMA4D-208	ENST00000422704	DAPK3	O43293	454 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	MOCS3	O95396	460 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	CLUL1	Q15846	466 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	LARP4B	Q92615	738 aa	Known RBP	11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	STRBP	Q96SI9	672 aa	Known RBP	11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	FOXP1	Q9H334	677 aa	Predicted RBP	11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	PP2D1	A8MPX8	630 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	HOXA13	P31271	388 aa	Predicted RBP	11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	ADCY8	P40145	1251 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	SNX1	Q13596	522 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	CERS3	Q8IU89	383 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	TRIML1	Q8N9V2	468 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	RNF169	Q8NCN4	708 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	TBC1D22A	Q8WUA7	517 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	CCDC51	Q96ER9	411 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	TRIM6	Q9C030	488 aa	Predicted RBP	11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	STRCP1	A6NGW2	1772 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	VIRMA	Q69YN4	1812 aa	Known RBP	11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	OVOS2	A0A0G2JMS6	1433 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	FMNL1	O95466	1100 aa	Predicted RBP	11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	STX2	P32856	288 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	LIN9	Q5TKA1	542 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	CYB5R4	Q7L1T6	521 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	SH2D4A	Q9H788	454 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	LARS	Q9P2J5	1176 aa	Known RBP	11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	PLCG1	P19174	1290 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	MIGA2	Q7L4E1	593 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	EEPD1	Q7L9B9	569 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	RABGGTA	Q92696	567 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	DDX12P	Q92771	950 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	STMN2	Q93045	179 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	LZTS2	Q9BRK4	669 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	CAPS2	Q9BXY5	557 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	COX16	Q9P0S2	106 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	ANKFY1	Q9P2R3	1169 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	ATP8A1	Q9Y2Q0	1164 aa		11.63	□□□□□ -0.55
SEMA4D-208	ENST00000422704	TEX33	O43247	280 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	PPP6R2	O75170	966 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	HEXIM1	O94992	359 aa	Known RBP	11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	TCP1	P17987	556 aa	Known RBP	11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	CDC27	P30260	824 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	PLTP	P55058	493 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	IFT88	Q13099	833 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	TUBB2A	Q13885	445 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	NEDD9	Q14511	834 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	ARMCX5	Q6P1M9	558 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	CCDC110	Q8TBZ0	833 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	TUBB2B	Q9BVA1	445 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	LRRIQ4	A6NIV6	560 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	EIF4A3	P38919	411 aa	Known RBP	11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	SMC1B	Q8NDV3	1235 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	MAGOHB	Q96A72	148 aa	Known RBP	11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	MCUR1	Q96AQ8	359 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	UBN2	Q6ZU65	1347 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	LMO7	Q8WWI1	1683 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	FRMD3	A2A2Y4	597 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	CUL4B	Q13620	913 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	CYP4F22	Q6NT55	531 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	GSPT2	Q8IYD1	628 aa	Known RBP	11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	P2RX5	Q93086	422 aa		11.62	□□□□□ -0.55
SEMA4D-208	ENST00000422704	BCS1L	Q9Y276	419 aa		11.62	□□□□□ -0.55

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