RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 INHAP05111 366 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 MRPL12P52815 198 aaKnown RBP10.66□□□□□ -0.7
PDGFC-202ENST00000422544 GHRHRQ02643 423 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 UBE2SQ16763 222 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 PRAMEF19Q5SWL8 479 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 MFSD14CQ5VZR4 134 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 PPP1R18Q6NYC8 613 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 ZNF467Q7Z7K2 595 aaPredicted RBP10.66□□□□□ -0.7
PDGFC-202ENST00000422544 TRMT44Q8IYL2 757 aaKnown RBP10.66□□□□□ -0.7
PDGFC-202ENST00000422544 SAMD3Q8N6K7 520 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 ZNF713Q8N859 430 aaPredicted RBP10.66□□□□□ -0.7
PDGFC-202ENST00000422544 SMARCC2Q8TAQ2 1214 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 CUL5Q93034 780 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 RMDN3Q96TC7 470 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 LLPHQ9BRT6 129 aaKnown RBP10.66□□□□□ -0.7
PDGFC-202ENST00000422544 TINF2Q9BSI4 451 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 RIC8AQ9NPQ8 531 aa10.66□□□□□ -0.7
PDGFC-202ENST00000422544 MAP3K20Q9NYL2 800 aaKnown RBP10.66□□□□□ -0.7
PDGFC-202ENST00000422544 PIK3CDO00329 1044 aa10.65□□□□□ -0.7
PDGFC-202ENST00000422544 ADAMTS3O15072 1205 aa10.65□□□□□ -0.7
PDGFC-202ENST00000422544 SNAI1O95863 264 aaPredicted RBP10.65□□□□□ -0.7
PDGFC-202ENST00000422544 ADCY7P51828 1080 aa10.65□□□□□ -0.7
PDGFC-202ENST00000422544 NLRP5P59047 1200 aa10.65□□□□□ -0.7
PDGFC-202ENST00000422544 CACNB2Q08289 660 aaPredicted RBP10.65□□□□□ -0.7
PDGFC-202ENST00000422544 ARHGEF16Q5VV41 709 aa10.65□□□□□ -0.7
PDGFC-202ENST00000422544 MAMDC4Q6UXC1 1216 aa10.65□□□□□ -0.7
PDGFC-202ENST00000422544 MSL3Q8N5Y2 521 aaKnown RBP10.65□□□□□ -0.7
PDGFC-202ENST00000422544 DNERQ8NFT8 737 aa10.65□□□□□ -0.7
PDGFC-202ENST00000422544 NSUN6Q8TEA1 469 aaKnown RBP10.65□□□□□ -0.7
PDGFC-202ENST00000422544 CCDC12Q8WUD4 166 aaPredicted RBP10.65□□□□□ -0.7
PDGFC-202ENST00000422544 WASF1Q92558 559 aa10.65□□□□□ -0.7
PDGFC-202ENST00000422544 SNX21Q969T3 373 aa10.65□□□□□ -0.7
PDGFC-202ENST00000422544 ALG1Q9BT22 464 aa10.65□□□□□ -0.7
PDGFC-202ENST00000422544 ZMYND12Q9H0C1 365 aa10.65□□□□□ -0.7
PDGFC-202ENST00000422544 SH3GLB2Q9NR46 395 aa10.65□□□□□ -0.7
PDGFC-202ENST00000422544 GJB4Q9NTQ9 266 aa10.65□□□□□ -0.7
PDGFC-202ENST00000422544 ADD3Q9UEY8 706 aaKnown RBP10.65□□□□□ -0.7
PDGFC-202ENST00000422544 MGAMO43451 1857 aa10.65□□□□□ -0.7
PDGFC-202ENST00000422544 ESYT2A0FGR8 921 aa10.64□□□□□ -0.71
PDGFC-202ENST00000422544 ASB14A6NK59 587 aa10.64□□□□□ -0.71
PDGFC-202ENST00000422544 H0YGN5 161 aa10.64□□□□□ -0.71
PDGFC-202ENST00000422544 PRKAR2AP13861 404 aaKnown RBP10.64□□□□□ -0.71
PDGFC-202ENST00000422544 EIF2AK2P19525 551 aaKnown RBP10.64□□□□□ -0.71
PDGFC-202ENST00000422544 ALDH5A1P51649 535 aaPredicted RBP10.64□□□□□ -0.71
PDGFC-202ENST00000422544 FOSBP53539 338 aa10.64□□□□□ -0.71
PDGFC-202ENST00000422544 UBXN2AP68543 259 aa10.64□□□□□ -0.71
PDGFC-202ENST00000422544 MTFR1Q15390 333 aa10.64□□□□□ -0.71
PDGFC-202ENST00000422544 ARMCX2Q7L311 632 aa10.64□□□□□ -0.71
PDGFC-202ENST00000422544 EEPD1Q7L9B9 569 aa10.64□□□□□ -0.71
PDGFC-202ENST00000422544 TRPV1Q8NER1 839 aa10.64□□□□□ -0.71
PDGFC-202ENST00000422544 CCDC148Q8NFR7 591 aa10.64□□□□□ -0.71
PDGFC-202ENST00000422544 ZNF333Q96JL9 665 aa10.64□□□□□ -0.71
PDGFC-202ENST00000422544 C6orf50Q9HD87 102 aa10.64□□□□□ -0.71
PDGFC-202ENST00000422544 PXMP2Q9NR77 195 aa10.64□□□□□ -0.71
PDGFC-202ENST00000422544 TMEM260Q9NX78 707 aa10.64□□□□□ -0.71
PDGFC-202ENST00000422544 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.64□□□□□ -0.71
PDGFC-202ENST00000422544 KCNJ14Q9UNX9 436 aa10.64□□□□□ -0.71
PDGFC-202ENST00000422544 PLXNB2O15031 1838 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 SYNGAP1Q96PV0 1343 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 K7ELQ4 463 aaPredicted RBP10.63□□□□□ -0.71
PDGFC-202ENST00000422544 XBP1P17861 261 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 EDNRBP24530 442 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 GNA11P29992 359 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 CCND3P30281 292 aaPredicted RBP10.63□□□□□ -0.71
PDGFC-202ENST00000422544 HMGN5P82970 282 aaKnown RBP10.63□□□□□ -0.71
PDGFC-202ENST00000422544 PDE4DQ08499 809 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 CUL4AQ13619 759 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 MAP3K21Q5TCX8 1036 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 JAKMIP3Q5VZ66 844 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 HSCBQ8IWL3 235 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 FAM184AQ8NB25 1140 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 ZFP91Q96JP5 570 aaPredicted RBP10.63□□□□□ -0.71
PDGFC-202ENST00000422544 PGBD1Q96JS3 809 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 IWS1Q96ST2 819 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 PDCD2LQ9BRP1 358 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 GLT8D2Q9H1C3 349 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 UNC93B1Q9H1C4 597 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 PCDHA6Q9UN73 950 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 PCDHA4Q9UN74 947 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 CNPY2Q9Y2B0 182 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 PCDHA8Q9Y5H6 950 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 CDH23Q9H251 3354 aa10.63□□□□□ -0.71
PDGFC-202ENST00000422544 RPTORQ8N122 1335 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 SPDYE3A6NKU9 549 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 B4DLN1 442 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 NR3C2P08235 984 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 ZNF865P0CJ78 1059 aaPredicted RBP10.62□□□□□ -0.71
PDGFC-202ENST00000422544 MYCLP12524 364 aaPredicted RBP10.62□□□□□ -0.71
PDGFC-202ENST00000422544 CYBAP13498 195 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 CCL5P13501 91 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 CNGA1P29973 690 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 CLK2P49760 499 aaKnown RBP10.62□□□□□ -0.71
PDGFC-202ENST00000422544 GUCY1B3Q02153 619 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 ACVR2BQ13705 512 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 FBXO16Q8IX29 292 aaPredicted RBP10.62□□□□□ -0.71
PDGFC-202ENST00000422544 IL31RAQ8NI17 732 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 BICD2Q8TD16 824 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 RASGRP4Q8TDF6 673 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 MORC4Q8TE76 937 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 MPHOSPH6Q99547 160 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms