RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 SLC34A2O95436 690 aa18.12■□□□□ 0.49
BRAT1-202ENST00000421712 AKR1A1P14550 325 aa18.12■□□□□ 0.49
BRAT1-202ENST00000421712 PWP2Q15269 919 aaKnown RBP18.12■□□□□ 0.49
BRAT1-202ENST00000421712 CCDC144BQ3MJ40 725 aa18.12■□□□□ 0.49
BRAT1-202ENST00000421712 USP17L6PQ6QN14 398 aa18.12■□□□□ 0.49
BRAT1-202ENST00000421712 FBXO16Q8IX29 292 aaPredicted RBP18.12■□□□□ 0.49
BRAT1-202ENST00000421712 ZNF713Q8N859 430 aaPredicted RBP18.12■□□□□ 0.49
BRAT1-202ENST00000421712 PXMP2Q9NR77 195 aa18.12■□□□□ 0.49
BRAT1-202ENST00000421712 BARHL2Q9NY43 387 aa18.12■□□□□ 0.49
BRAT1-202ENST00000421712 SMCO2A6NFE2 343 aa18.11■□□□□ 0.49
BRAT1-202ENST00000421712 RARBP10826 455 aa18.11■□□□□ 0.49
BRAT1-202ENST00000421712 MYCLP12524 364 aaPredicted RBP18.11■□□□□ 0.49
BRAT1-202ENST00000421712 ADCY7P51828 1080 aa18.11■□□□□ 0.49
BRAT1-202ENST00000421712 GHRHRQ02643 423 aa18.11■□□□□ 0.49
BRAT1-202ENST00000421712 LHX8Q68G74 356 aa18.11■□□□□ 0.49
BRAT1-202ENST00000421712 CCDC12Q8WUD4 166 aaPredicted RBP18.11■□□□□ 0.49
BRAT1-202ENST00000421712 IWS1Q96ST2 819 aa18.11■□□□□ 0.49
BRAT1-202ENST00000421712 VTA1Q9NP79 307 aa18.11■□□□□ 0.49
BRAT1-202ENST00000421712 LCTP09848 1927 aa18.1■□□□□ 0.49
BRAT1-202ENST00000421712 RBBP6Q7Z6E9 1792 aaKnown RBP18.1■□□□□ 0.49
BRAT1-202ENST00000421712 LARGE1O95461 756 aa18.1■□□□□ 0.49
BRAT1-202ENST00000421712 CAPN2P17655 700 aa18.1■□□□□ 0.49
BRAT1-202ENST00000421712 STXBP2Q15833 593 aa18.1■□□□□ 0.49
BRAT1-202ENST00000421712 PKN1Q16512 942 aa18.1■□□□□ 0.49
BRAT1-202ENST00000421712 UBE2SQ16763 222 aa18.1■□□□□ 0.49
BRAT1-202ENST00000421712 PPP1R18Q6NYC8 613 aa18.1■□□□□ 0.49
BRAT1-202ENST00000421712 MORC4Q8TE76 937 aa18.1■□□□□ 0.49
BRAT1-202ENST00000421712 CRISPLD2Q9H0B8 497 aa18.1■□□□□ 0.49
BRAT1-202ENST00000421712 SPDYE3A6NKU9 549 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 PIK3CDO00329 1044 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 MEIS2O14770 477 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 DEXIO95424 95 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 NR3C2P08235 984 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 ADCYAP1R1P41586 468 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 TNFAIP2Q03169 654 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 IQSEC1Q6DN90 963 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 TYW1BQ6NUM6 668 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 SEPT14Q6ZU15 432 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 GTF3C6Q969F1 213 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 SHISA4Q96DD7 197 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 ZSCAN31Q96LW9 406 aaPredicted RBP18.09■□□□□ 0.49
BRAT1-202ENST00000421712 GLT8D2Q9H1C3 349 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 C6orf50Q9HD87 102 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 RIC8AQ9NPQ8 531 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 XPNPEP3Q9NQH7 507 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 PDGFCQ9NRA1 345 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 OGDHLQ9ULD0 1010 aa18.09■□□□□ 0.49
BRAT1-202ENST00000421712 DTNBO60941 627 aa18.08■□□□□ 0.48
BRAT1-202ENST00000421712 FARP2O94887 1054 aaPredicted RBP18.08■□□□□ 0.48
BRAT1-202ENST00000421712 EDNRBP24530 442 aa18.08■□□□□ 0.48
BRAT1-202ENST00000421712 CCND2P30279 289 aa18.08■□□□□ 0.48
BRAT1-202ENST00000421712 NLRP5P59047 1200 aa18.08■□□□□ 0.48
BRAT1-202ENST00000421712 PGM5Q15124 567 aa18.08■□□□□ 0.48
BRAT1-202ENST00000421712 ARRDC4Q8NCT1 418 aa18.08■□□□□ 0.48
BRAT1-202ENST00000421712 CCDC148Q8NFR7 591 aa18.08■□□□□ 0.48
BRAT1-202ENST00000421712 LENG1Q96BZ8 264 aaPredicted RBP18.08■□□□□ 0.48
BRAT1-202ENST00000421712 PDCD2LQ9BRP1 358 aa18.08■□□□□ 0.48
BRAT1-202ENST00000421712 KATNBL1Q9H079 304 aa18.08■□□□□ 0.48
BRAT1-202ENST00000421712 EHMT1Q9H9B1 1298 aa18.08■□□□□ 0.48
BRAT1-202ENST00000421712 SPC25Q9HBM1 224 aa18.08■□□□□ 0.48
BRAT1-202ENST00000421712 VPS54Q9P1Q0 977 aa18.08■□□□□ 0.48
BRAT1-202ENST00000421712 ORC3Q9UBD5 711 aaPredicted RBP18.08■□□□□ 0.48
BRAT1-202ENST00000421712 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.07■□□□□ 0.48
BRAT1-202ENST00000421712 EIF3JO75822 258 aaKnown RBP18.07■□□□□ 0.48
BRAT1-202ENST00000421712 PGK1P00558 417 aa18.07■□□□□ 0.48
BRAT1-202ENST00000421712 GNA11P29992 359 aa18.07■□□□□ 0.48
BRAT1-202ENST00000421712 TAPT1Q6NXT6 567 aa18.07■□□□□ 0.48
BRAT1-202ENST00000421712 CCDC83Q8IWF9 413 aa18.07■□□□□ 0.48
BRAT1-202ENST00000421712 IL27Q8NEV9 243 aa18.07■□□□□ 0.48
BRAT1-202ENST00000421712 WDR11Q9BZH6 1224 aa18.07■□□□□ 0.48
BRAT1-202ENST00000421712 SH2B1Q9NRF2 756 aaPredicted RBP18.07■□□□□ 0.48
BRAT1-202ENST00000421712 PCDHA6Q9UN73 950 aa18.07■□□□□ 0.48
BRAT1-202ENST00000421712 PCDHA8Q9Y5H6 950 aa18.07■□□□□ 0.48
BRAT1-202ENST00000421712 DUSP11O75319 330 aaKnown RBP18.06■□□□□ 0.48
BRAT1-202ENST00000421712 XBP1P17861 261 aa18.06■□□□□ 0.48
BRAT1-202ENST00000421712 GJC2Q5T442 439 aaPredicted RBP18.06■□□□□ 0.48
BRAT1-202ENST00000421712 RNF180Q86T96 592 aa18.06■□□□□ 0.48
BRAT1-202ENST00000421712 ANKLE1Q8NAG6 615 aa18.06■□□□□ 0.48
BRAT1-202ENST00000421712 SCFD2Q8WU76 684 aa18.06■□□□□ 0.48
BRAT1-202ENST00000421712 WASF1Q92558 559 aa18.06■□□□□ 0.48
BRAT1-202ENST00000421712 ZFP91Q96JP5 570 aaPredicted RBP18.06■□□□□ 0.48
BRAT1-202ENST00000421712 AP5M1Q9H0R1 490 aa18.06■□□□□ 0.48
BRAT1-202ENST00000421712 BRCA2P51587 3418 aa18.05■□□□□ 0.48
BRAT1-202ENST00000421712 KBTBD13C9JR72 458 aa18.05■□□□□ 0.48
BRAT1-202ENST00000421712 DYNC1LI2O43237 492 aaPredicted RBP18.05■□□□□ 0.48
BRAT1-202ENST00000421712 CTDNEP1O95476 244 aa18.05■□□□□ 0.48
BRAT1-202ENST00000421712 FOSP01100 380 aaPredicted RBP18.05■□□□□ 0.48
BRAT1-202ENST00000421712 C6orf222P0C671 652 aaPredicted RBP18.05■□□□□ 0.48
BRAT1-202ENST00000421712 SMPD1P17405 629 aa18.05■□□□□ 0.48
BRAT1-202ENST00000421712 TTLL4Q14679 1199 aa18.05■□□□□ 0.48
BRAT1-202ENST00000421712 JAKMIP3Q5VZ66 844 aa18.05■□□□□ 0.48
BRAT1-202ENST00000421712 NECAB2Q7Z6G3 386 aa18.05■□□□□ 0.48
BRAT1-202ENST00000421712 VSIG10LQ86VR7 867 aa18.05■□□□□ 0.48
BRAT1-202ENST00000421712 IL31RAQ8NI17 732 aa18.05■□□□□ 0.48
BRAT1-202ENST00000421712 BICD2Q8TD16 824 aa18.05■□□□□ 0.48
BRAT1-202ENST00000421712 PAWRQ96IZ0 340 aaKnown RBP18.05■□□□□ 0.48
BRAT1-202ENST00000421712 PGBD1Q96JS3 809 aa18.05■□□□□ 0.48
BRAT1-202ENST00000421712 AIFM3Q96NN9 605 aa18.05■□□□□ 0.48
BRAT1-202ENST00000421712 ZMYND12Q9H0C1 365 aa18.05■□□□□ 0.48
BRAT1-202ENST00000421712 SH3GLB2Q9NR46 395 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms