RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 AP3B2Q13367 1082 aa17.97■□□□□ 0.47
DDX55-203ENST00000421670 DPP9Q86TI2 863 aa17.97■□□□□ 0.47
DDX55-203ENST00000421670 SAMD3Q8N6K7 520 aa17.97■□□□□ 0.47
DDX55-203ENST00000421670 FGD4Q96M96 766 aa17.97■□□□□ 0.47
DDX55-203ENST00000421670 RMDN3Q96TC7 470 aa17.97■□□□□ 0.47
DDX55-203ENST00000421670 ANO3Q9BYT9 981 aa17.97■□□□□ 0.47
DDX55-203ENST00000421670 GABRQQ9UN88 632 aa17.97■□□□□ 0.47
DDX55-203ENST00000421670 SOWAHBA6NEL2 793 aa17.96■□□□□ 0.47
DDX55-203ENST00000421670 EIF2AK2P19525 551 aaKnown RBP17.96■□□□□ 0.47
DDX55-203ENST00000421670 PRKCZQ05513 592 aa17.96■□□□□ 0.47
DDX55-203ENST00000421670 MAP2K5Q13163 448 aa17.96■□□□□ 0.47
DDX55-203ENST00000421670 PIK3AP1Q6ZUJ8 805 aa17.96■□□□□ 0.47
DDX55-203ENST00000421670 SOCS4Q8WXH5 440 aa17.96■□□□□ 0.47
DDX55-203ENST00000421670 NUDT12Q9BQG2 462 aa17.96■□□□□ 0.47
DDX55-203ENST00000421670 MAF1Q9H063 256 aa17.96■□□□□ 0.47
DDX55-203ENST00000421670 FOXP1Q9H334 677 aaPredicted RBP17.96■□□□□ 0.47
DDX55-203ENST00000421670 GJD2Q9UKL4 321 aa17.96■□□□□ 0.47
DDX55-203ENST00000421670 FRMPD4Q14CM0 1322 aa17.96■□□□□ 0.46
DDX55-203ENST00000421670 CYP2B6P20813 491 aa17.96■□□□□ 0.46
DDX55-203ENST00000421670 U2AF2P26368 475 aaKnown RBP eCLIP17.96■□□□□ 0.46
DDX55-203ENST00000421670 ZNF792Q3KQV3 632 aa17.96■□□□□ 0.46
DDX55-203ENST00000421670 NOSTRINQ8IVI9 506 aa17.96■□□□□ 0.46
DDX55-203ENST00000421670 TEX2Q8IWB9 1127 aa17.96■□□□□ 0.46
DDX55-203ENST00000421670 IL31RAQ8NI17 732 aa17.96■□□□□ 0.46
DDX55-203ENST00000421670 NPLOC4Q8TAT6 608 aa17.96■□□□□ 0.46
DDX55-203ENST00000421670 USP6NLQ92738 828 aa17.96■□□□□ 0.46
DDX55-203ENST00000421670 PXMP2Q9NR77 195 aa17.96■□□□□ 0.46
DDX55-203ENST00000421670 RPTORQ8N122 1335 aa17.95■□□□□ 0.46
DDX55-203ENST00000421670 CCDC194A0A1B0GVG4 234 aa17.95■□□□□ 0.46
DDX55-203ENST00000421670 FOSP01100 380 aaPredicted RBP17.95■□□□□ 0.46
DDX55-203ENST00000421670 ALDH5A1P51649 535 aaPredicted RBP17.95■□□□□ 0.46
DDX55-203ENST00000421670 ARHGEF16Q5VV41 709 aa17.95■□□□□ 0.46
DDX55-203ENST00000421670 KRT25Q7Z3Z0 450 aa17.95■□□□□ 0.46
DDX55-203ENST00000421670 TCHHQ07283 1943 aa17.94■□□□□ 0.46
DDX55-203ENST00000421670 DOCK5Q9H7D0 1870 aa17.94■□□□□ 0.46
DDX55-203ENST00000421670 ZSCAN22P10073 491 aaPredicted RBP17.94■□□□□ 0.46
DDX55-203ENST00000421670 RGS2P41220 211 aa17.94■□□□□ 0.46
DDX55-203ENST00000421670 FLT3LGP49771 235 aa17.94■□□□□ 0.46
DDX55-203ENST00000421670 LBX1P52954 281 aa17.94■□□□□ 0.46
DDX55-203ENST00000421670 RESTQ13127 1097 aa17.94■□□□□ 0.46
DDX55-203ENST00000421670 NONOQ15233 471 aaKnown RBP eCLIP17.94■□□□□ 0.46
DDX55-203ENST00000421670 INF2Q27J81 1249 aa17.94■□□□□ 0.46
DDX55-203ENST00000421670 DNERQ8NFT8 737 aa17.94■□□□□ 0.46
DDX55-203ENST00000421670 TBCKQ8TEA7 893 aa17.94■□□□□ 0.46
DDX55-203ENST00000421670 MAML3Q96JK9 1138 aa17.94■□□□□ 0.46
DDX55-203ENST00000421670 APBA2Q99767 749 aa17.94■□□□□ 0.46
DDX55-203ENST00000421670 ADD3Q9UEY8 706 aaKnown RBP17.94■□□□□ 0.46
DDX55-203ENST00000421670 ZDHHC9Q9Y397 364 aa17.94■□□□□ 0.46
DDX55-203ENST00000421670 BRD1O95696 1058 aa17.93■□□□□ 0.46
DDX55-203ENST00000421670 SREBF1P36956 1147 aa17.93■□□□□ 0.46
DDX55-203ENST00000421670 PGM5Q15124 567 aa17.93■□□□□ 0.46
DDX55-203ENST00000421670 CCL14Q16627 93 aa17.93■□□□□ 0.46
DDX55-203ENST00000421670 MCTP2Q6DN12 878 aa17.93■□□□□ 0.46
DDX55-203ENST00000421670 NSUN6Q8TEA1 469 aaKnown RBP17.93■□□□□ 0.46
DDX55-203ENST00000421670 ZFP91Q96JP5 570 aaPredicted RBP17.93■□□□□ 0.46
DDX55-203ENST00000421670 PDCD2LQ9BRP1 358 aa17.93■□□□□ 0.46
DDX55-203ENST00000421670 EHMT1Q9H9B1 1298 aa17.93■□□□□ 0.46
DDX55-203ENST00000421670 SRRDQ9UH36 339 aa17.93■□□□□ 0.46
DDX55-203ENST00000421670 F13A1P00488 732 aa17.92■□□□□ 0.46
DDX55-203ENST00000421670 HOXC6P09630 235 aa17.92■□□□□ 0.46
DDX55-203ENST00000421670 CTCFP49711 727 aaPredicted RBP17.92■□□□□ 0.46
DDX55-203ENST00000421670 OTOP1Q7RTM1 612 aa17.92■□□□□ 0.46
DDX55-203ENST00000421670 SLC5A4Q9NY91 659 aa17.92■□□□□ 0.46
DDX55-203ENST00000421670 FLRT1Q9NZU1 646 aa17.92■□□□□ 0.46
DDX55-203ENST00000421670 TRIM17Q9Y577 477 aa17.92■□□□□ 0.46
DDX55-203ENST00000421670 MYCLP12524 364 aaPredicted RBP17.91■□□□□ 0.46
DDX55-203ENST00000421670 PDIA4P13667 645 aaKnown RBP17.91■□□□□ 0.46
DDX55-203ENST00000421670 ARHGAP4P98171 946 aa17.91■□□□□ 0.46
DDX55-203ENST00000421670 FAM173BQ6P4H8 233 aa17.91■□□□□ 0.46
DDX55-203ENST00000421670 CRYGNQ8WXF5 182 aa17.91■□□□□ 0.46
DDX55-203ENST00000421670 WNT7AO00755 349 aa17.91■□□□□ 0.46
DDX55-203ENST00000421670 GNRH1P01148 92 aa17.91■□□□□ 0.46
DDX55-203ENST00000421670 NR3C2P08235 984 aa17.91■□□□□ 0.46
DDX55-203ENST00000421670 HOXD10P28358 340 aa17.91■□□□□ 0.46
DDX55-203ENST00000421670 ARHGEF6Q15052 776 aa17.91■□□□□ 0.46
DDX55-203ENST00000421670 FOXD4L6Q3SYB3 417 aaPredicted RBP17.91■□□□□ 0.46
DDX55-203ENST00000421670 FOXD4L3Q6VB84 417 aaPredicted RBP17.91■□□□□ 0.46
DDX55-203ENST00000421670 BRAPQ7Z569 592 aa17.91■□□□□ 0.46
DDX55-203ENST00000421670 DIS3Q9Y2L1 958 aaKnown RBP17.91■□□□□ 0.46
DDX55-203ENST00000421670 EDIL3O43854 480 aa17.9■□□□□ 0.46
DDX55-203ENST00000421670 ATP2B1P20020 1258 aa17.9■□□□□ 0.46
DDX55-203ENST00000421670 EDNRBP24530 442 aa17.9■□□□□ 0.46
DDX55-203ENST00000421670 CCND2P30279 289 aa17.9■□□□□ 0.46
DDX55-203ENST00000421670 MRPS9P82933 396 aaKnown RBP17.9■□□□□ 0.46
DDX55-203ENST00000421670 NBR1Q14596 966 aa17.9■□□□□ 0.46
DDX55-203ENST00000421670 LETM2Q2VYF4 491 aa17.9■□□□□ 0.46
DDX55-203ENST00000421670 PCNX4Q63HM2 1172 aa17.9■□□□□ 0.46
DDX55-203ENST00000421670 ARMCX2Q7L311 632 aa17.9■□□□□ 0.46
DDX55-203ENST00000421670 ZNF467Q7Z7K2 595 aaPredicted RBP17.9■□□□□ 0.46
DDX55-203ENST00000421670 NEK8Q86SG6 692 aa17.9■□□□□ 0.46
DDX55-203ENST00000421670 CIZ1Q9ULV3 898 aaPredicted RBP17.9■□□□□ 0.46
DDX55-203ENST00000421670 XRCC5P13010 732 aaKnown RBP17.89■□□□□ 0.45
DDX55-203ENST00000421670 ELNP15502 786 aa17.89■□□□□ 0.45
DDX55-203ENST00000421670 NUCB2P80303 420 aa17.89■□□□□ 0.45
DDX55-203ENST00000421670 PDE4DQ08499 809 aa17.89■□□□□ 0.45
DDX55-203ENST00000421670 EEPD1Q7L9B9 569 aa17.89■□□□□ 0.45
DDX55-203ENST00000421670 RAET1EQ8TD07 263 aa17.89■□□□□ 0.45
DDX55-203ENST00000421670 TRIB2Q92519 343 aa17.89■□□□□ 0.45
DDX55-203ENST00000421670 IWS1Q96ST2 819 aa17.89■□□□□ 0.45
DDX55-203ENST00000421670 TINF2Q9BSI4 451 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms