RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 HLA-DOAP06340 250 aa16.1■□□□□ 0.17
CHRD-204ENST00000420973 SRGNP10124 158 aa16.1■□□□□ 0.17
CHRD-204ENST00000420973 MTA1Q13330 715 aa16.1■□□□□ 0.17
CHRD-204ENST00000420973 CASP8Q14790 479 aa16.1■□□□□ 0.17
CHRD-204ENST00000420973 THEMIS2Q5TEJ8 643 aa16.1■□□□□ 0.17
CHRD-204ENST00000420973 PHF20Q9BVI0 1012 aa16.1■□□□□ 0.17
CHRD-204ENST00000420973 TPD52L2O43399 206 aaKnown RBP16.1■□□□□ 0.17
CHRD-204ENST00000420973 ORC4O43929 436 aa16.1■□□□□ 0.17
CHRD-204ENST00000420973 PLCG2P16885 1265 aa16.1■□□□□ 0.17
CHRD-204ENST00000420973 TECP42680 631 aa16.1■□□□□ 0.17
CHRD-204ENST00000420973 PDCD2Q16342 344 aaPredicted RBP16.1■□□□□ 0.17
CHRD-204ENST00000420973 CCDC178Q5BJE1 867 aa16.1■□□□□ 0.17
CHRD-204ENST00000420973 PCMTD1Q96MG8 357 aaPredicted RBP16.1■□□□□ 0.17
CHRD-204ENST00000420973 ADKP55263 362 aaKnown RBP16.09■□□□□ 0.17
CHRD-204ENST00000420973 CHMP4BP1P59074 171 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 GRIK3Q13003 919 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 HHATQ5VTY9 493 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 PHLPP2Q6ZVD8 1323 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 CCDC84Q86UT8 332 aaPredicted RBP16.09■□□□□ 0.17
CHRD-204ENST00000420973 STK36Q9NRP7 1315 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 KLC4Q9NSK0 619 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 SERPINB13Q9UIV8 391 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 CTNND2Q9UQB3 1225 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 TMCO5BA8MYB1 307 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 ALDH1B1P30837 517 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 FMR1Q06787 632 aaKnown RBP eCLIP16.09■□□□□ 0.17
CHRD-204ENST00000420973 SF3B2Q13435 895 aaKnown RBP16.09■□□□□ 0.17
CHRD-204ENST00000420973 DTHD1Q6ZMT9 781 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 CCDC150Q8NCX0 1101 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 ATP6V0A2Q9Y487 856 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 NDUFAB1O14561 156 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 PFKFB3Q16875 520 aaPredicted RBP16.09■□□□□ 0.17
CHRD-204ENST00000420973 C1QTNF12Q5T7M4 302 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 TMEM60Q9H2L4 133 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 POLD4Q9HCU8 107 aa16.09■□□□□ 0.17
CHRD-204ENST00000420973 TUBB4AP04350 444 aa16.08■□□□□ 0.16
CHRD-204ENST00000420973 NPR1P16066 1061 aa16.08■□□□□ 0.16
CHRD-204ENST00000420973 PECAM1P16284 738 aaPredicted RBP16.08■□□□□ 0.16
CHRD-204ENST00000420973 RBM43Q6ZSC3 357 aaKnown RBP16.08■□□□□ 0.16
CHRD-204ENST00000420973 GBP3Q9H0R5 595 aa16.08■□□□□ 0.16
CHRD-204ENST00000420973 SRPRBQ9Y5M8 271 aaKnown RBP16.08■□□□□ 0.16
CHRD-204ENST00000420973 ANKRD33BA6NCL7 494 aa16.08■□□□□ 0.16
CHRD-204ENST00000420973 MIGA2Q7L4E1 593 aa16.08■□□□□ 0.16
CHRD-204ENST00000420973 ACRBPQ8NEB7 543 aa16.08■□□□□ 0.16
CHRD-204ENST00000420973 CDK5RAP3Q96JB5 506 aa16.08■□□□□ 0.16
CHRD-204ENST00000420973 EHD4Q9H223 541 aa16.08■□□□□ 0.16
CHRD-204ENST00000420973 VPS16Q9H269 839 aa16.08■□□□□ 0.16
CHRD-204ENST00000420973 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
CHRD-204ENST00000420973 MYH7P12883 1935 aa16.08■□□□□ 0.16
CHRD-204ENST00000420973 FAM170AA1A519 330 aa16.07■□□□□ 0.16
CHRD-204ENST00000420973 MAP2K7O14733 419 aa16.07■□□□□ 0.16
CHRD-204ENST00000420973 MYLK4Q86YV6 388 aaPredicted RBP16.07■□□□□ 0.16
CHRD-204ENST00000420973 RIN2Q8WYP3 895 aaPredicted RBP16.07■□□□□ 0.16
CHRD-204ENST00000420973 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.07■□□□□ 0.16
CHRD-204ENST00000420973 ZBTB7AO95365 584 aa16.07■□□□□ 0.16
CHRD-204ENST00000420973 CALML3P27482 149 aa16.07■□□□□ 0.16
CHRD-204ENST00000420973 FUT2Q10981 343 aa16.07■□□□□ 0.16
CHRD-204ENST00000420973 ARL10Q8N8L6 244 aa16.07■□□□□ 0.16
CHRD-204ENST00000420973 A1CFQ9NQ94 594 aaKnown RBP16.07■□□□□ 0.16
CHRD-204ENST00000420973 MAD2L2Q9UI95 211 aa16.07■□□□□ 0.16
CHRD-204ENST00000420973 CRKP46108 304 aa16.07■□□□□ 0.16
CHRD-204ENST00000420973 CUL4BQ13620 913 aa16.07■□□□□ 0.16
CHRD-204ENST00000420973 CDC42EP5Q6NZY7 148 aa16.07■□□□□ 0.16
CHRD-204ENST00000420973 DYMQ7RTS9 669 aa16.07■□□□□ 0.16
CHRD-204ENST00000420973 SP8Q8IXZ3 490 aa16.07■□□□□ 0.16
CHRD-204ENST00000420973 HPS3Q969F9 1004 aa16.07■□□□□ 0.16
CHRD-204ENST00000420973 ZNF277Q9NRM2 450 aaPredicted RBP16.07■□□□□ 0.16
CHRD-204ENST00000420973 GPR75-ASB3A0A0A6YYF3 556 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 BMP6P22004 513 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 RHBDL3P58872 404 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 DGKHQ86XP1 1220 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 LARGE2Q8N3Y3 721 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 MASTLQ96GX5 879 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 GDAQ9Y2T3 454 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 ANKRD36CQ5JPF3 1778 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 ECE2O60344 883 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 GNAQP50148 359 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 BEND6Q5SZJ8 279 aaPredicted RBP16.06■□□□□ 0.16
CHRD-204ENST00000420973 FAM76AQ8TAV0 307 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 TBC1D31Q96DN5 1066 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 COA1Q9GZY4 146 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 BTAF1O14981 1849 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 ATP2C2O75185 946 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 CAVIN2O95810 425 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 MYBL1P10243 752 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 SNCBQ16143 134 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 CRY2Q49AN0 593 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 SBK1Q52WX2 424 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 TBCKQ8TEA7 893 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 CCDC114Q96M63 670 aa16.06■□□□□ 0.16
CHRD-204ENST00000420973 CICQ96RK0 1608 aaPredicted RBP16.06■□□□□ 0.16
CHRD-204ENST00000420973 ZSCAN12O43309 604 aa16.05■□□□□ 0.16
CHRD-204ENST00000420973 COQ9O75208 318 aa16.05■□□□□ 0.16
CHRD-204ENST00000420973 SLC1A4P43007 532 aa16.05■□□□□ 0.16
CHRD-204ENST00000420973 DNAJC14Q6Y2X3 702 aaPredicted RBP16.05■□□□□ 0.16
CHRD-204ENST00000420973 FCHSD1Q86WN1 690 aa16.05■□□□□ 0.16
CHRD-204ENST00000420973 C6orf50Q9HD87 102 aa16.05■□□□□ 0.16
CHRD-204ENST00000420973 STK32BQ9NY57 414 aa16.05■□□□□ 0.16
CHRD-204ENST00000420973 CDC25CP30307 473 aa16.05■□□□□ 0.16
CHRD-204ENST00000420973 CCDC148Q8NFR7 591 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms