RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 SV2BQ7L1I2 683 aa13.24□□□□□ -0.29
LIMK1-202ENST00000418310 KRT25Q7Z3Z0 450 aa13.24□□□□□ -0.29
LIMK1-202ENST00000418310 ZNF804AQ7Z570 1209 aa13.24□□□□□ -0.29
LIMK1-202ENST00000418310 COG1Q8WTW3 980 aa13.24□□□□□ -0.29
LIMK1-202ENST00000418310 RPGRQ92834 1020 aaKnown RBP13.24□□□□□ -0.29
LIMK1-202ENST00000418310 SECISBP2LQ93073 1101 aaKnown RBP13.24□□□□□ -0.29
LIMK1-202ENST00000418310 IFIH1Q9BYX4 1025 aaKnown RBP13.24□□□□□ -0.29
LIMK1-202ENST00000418310 FAM196BA6NMK8 535 aa13.24□□□□□ -0.29
LIMK1-202ENST00000418310 KCNB1Q14721 858 aa13.24□□□□□ -0.29
LIMK1-202ENST00000418310 MIIPQ5JXC2 388 aa13.24□□□□□ -0.29
LIMK1-202ENST00000418310 TTC19Q6DKK2 380 aaPredicted RBP13.24□□□□□ -0.29
LIMK1-202ENST00000418310 TTBK2Q6IQ55 1244 aa13.24□□□□□ -0.29
LIMK1-202ENST00000418310 CACNA2D4Q7Z3S7 1137 aa13.24□□□□□ -0.29
LIMK1-202ENST00000418310 SH3GLB2Q9NR46 395 aa13.24□□□□□ -0.29
LIMK1-202ENST00000418310 A0A1B0GUL6 1792 aa13.24□□□□□ -0.29
LIMK1-202ENST00000418310 FECHP22830 423 aa13.24□□□□□ -0.29
LIMK1-202ENST00000418310 GNA11P29992 359 aa13.24□□□□□ -0.29
LIMK1-202ENST00000418310 SLC10A5Q5PT55 438 aa13.24□□□□□ -0.29
LIMK1-202ENST00000418310 TMED8Q6PL24 325 aaPredicted RBP13.24□□□□□ -0.29
LIMK1-202ENST00000418310 DPP8Q6V1X1 898 aaPredicted RBP13.24□□□□□ -0.29
LIMK1-202ENST00000418310 RTFDC1Q9BY42 306 aaPredicted RBP13.24□□□□□ -0.29
LIMK1-202ENST00000418310 BICDL2A1A5D9 508 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 LRRC53A6NM62 1247 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 RNF40O75150 1001 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 RPS6KA4O75676 772 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 SCNN1DP51172 638 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 USP14P54578 494 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 ZBED6P86452 979 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 GFPT1Q06210 699 aaPredicted RBP13.23□□□□□ -0.29
LIMK1-202ENST00000418310 FAM196AQ6ZSG2 479 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 DHTKD1Q96HY7 919 aaPredicted RBP13.23□□□□□ -0.29
LIMK1-202ENST00000418310 ZMYND12Q9H0C1 365 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 ARHGAP20Q9P2F6 1191 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 RSPH14Q9UHP6 348 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 NPHP3-ACAD11A0A0J9YXS1 232 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 GTF2IP78347 998 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 GRB10Q13322 594 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 KCTD1Q719H9 257 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 NDST4Q9H3R1 872 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 CD209Q9NNX6 404 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 A0A1W2PQC6 194 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 PSMD14O00487 310 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 TAL1P17542 331 aaPredicted RBP13.23□□□□□ -0.29
LIMK1-202ENST00000418310 SNAP25P60880 206 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 RASSF7Q02833 373 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 LARP4BQ92615 738 aaKnown RBP13.23□□□□□ -0.29
LIMK1-202ENST00000418310 GBP3Q9H0R5 595 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 MYO1AQ9UBC5 1043 aa13.23□□□□□ -0.29
LIMK1-202ENST00000418310 AKR1B1P15121 316 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 KIF11P52732 1056 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 CNNM4Q6P4Q7 775 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 DDX12PQ92771 950 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 FGFBP2Q9BYJ0 223 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 BLOC1S4Q9NUP1 217 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 PACSIN2Q9UNF0 486 aaPredicted RBP13.22□□□□□ -0.29
LIMK1-202ENST00000418310 STRCQ7RTU9 1775 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 TRAF5O00463 557 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 GSTO1P78417 241 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 AMPD3Q01432 767 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 GRAPQ13588 217 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 CCDC40Q4G0X9 1142 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 CCDC181Q5TID7 509 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 SAMD1Q6SPF0 538 aaPredicted RBP13.22□□□□□ -0.29
LIMK1-202ENST00000418310 SND1Q7KZF4 910 aaKnown RBP eCLIP13.22□□□□□ -0.29
LIMK1-202ENST00000418310 GOLGA6L1Q8N7Z2 621 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 GRAPLQ8TC17 118 aaPredicted RBP13.22□□□□□ -0.29
LIMK1-202ENST00000418310 HNRNPLLQ8WVV9 542 aaKnown RBP13.22□□□□□ -0.29
LIMK1-202ENST00000418310 MS4A14Q96JA4 679 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 TTYH3Q9C0H2 523 aa13.22□□□□□ -0.29
LIMK1-202ENST00000418310 THRAP3Q9Y2W1 955 aaKnown RBP13.22□□□□□ -0.29
LIMK1-202ENST00000418310 COL14A1Q05707 1796 aaKnown RBP13.22□□□□□ -0.29
LIMK1-202ENST00000418310 LDHCP07864 332 aa13.21□□□□□ -0.29
LIMK1-202ENST00000418310 ECM1Q16610 540 aa13.21□□□□□ -0.29
LIMK1-202ENST00000418310 SHROOM1Q2M3G4 852 aaPredicted RBP13.21□□□□□ -0.29
LIMK1-202ENST00000418310 FAM114A1Q8IWE2 563 aa13.21□□□□□ -0.29
LIMK1-202ENST00000418310 EXOC4Q96A65 974 aa13.21□□□□□ -0.29
LIMK1-202ENST00000418310 PNMA5Q96PV4 448 aa13.21□□□□□ -0.29
LIMK1-202ENST00000418310 LRRC1Q9BTT6 524 aa13.21□□□□□ -0.29
LIMK1-202ENST00000418310 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.21□□□□□ -0.29
LIMK1-202ENST00000418310 DMGDHQ9UI17 866 aaKnown RBP13.21□□□□□ -0.29
LIMK1-202ENST00000418310 GGCXP38435 758 aa13.21□□□□□ -0.29
LIMK1-202ENST00000418310 CACNB3P54284 484 aa13.21□□□□□ -0.29
LIMK1-202ENST00000418310 SALL4Q9UJQ4 1053 aa13.21□□□□□ -0.29
LIMK1-202ENST00000418310 PCDHA13Q9Y5I0 950 aa13.21□□□□□ -0.29
LIMK1-202ENST00000418310 TMEM266Q2M3C6 531 aa13.21□□□□□ -0.3
LIMK1-202ENST00000418310 VWA3BQ502W6 1294 aa13.21□□□□□ -0.3
LIMK1-202ENST00000418310 ESYT3A0FGR9 886 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 E9PMD0 336 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 PDHBP11177 359 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 ACTN2P35609 894 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 MAGEA1P43355 309 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 ADCY7P51828 1080 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 VAV2P52735 878 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 TRAPPC3LQ5T215 181 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 KRT79Q5XKE5 535 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 PROCA1Q8NCQ7 364 aaPredicted RBP13.2□□□□□ -0.3
LIMK1-202ENST00000418310 SELENOOQ9BVL4 669 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 ROBO1Q9Y6N7 1651 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 USP17L15C9J2P7 530 aa13.2□□□□□ -0.3
LIMK1-202ENST00000418310 USP17L13C9JLJ4 530 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms