RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 VAT1LQ9HCJ6 419 aa25.46■■□□□ 1.67
ACTB-203ENST00000417101 RAD50Q92878 1312 aa25.45■■□□□ 1.66
ACTB-203ENST00000417101 FGBP02675 491 aa25.45■■□□□ 1.66
ACTB-203ENST00000417101 TXNP10599 105 aaKnown RBP25.45■■□□□ 1.66
ACTB-203ENST00000417101 PBX2P40425 430 aa25.45■■□□□ 1.66
ACTB-203ENST00000417101 TTC22Q5TAA0 569 aa25.45■■□□□ 1.66
ACTB-203ENST00000417101 WNT8AQ9H1J5 351 aa25.45■■□□□ 1.66
ACTB-203ENST00000417101 ZNF576Q9H609 170 aa25.45■■□□□ 1.66
ACTB-203ENST00000417101 JMJD4Q9H9V9 463 aa25.45■■□□□ 1.66
ACTB-203ENST00000417101 TRMT13Q9NUP7 481 aaKnown RBP25.45■■□□□ 1.66
ACTB-203ENST00000417101 IFIT1BQ5T764 474 aaKnown RBP25.44■■□□□ 1.66
ACTB-203ENST00000417101 FBXO11Q86XK2 927 aa25.44■■□□□ 1.66
ACTB-203ENST00000417101 SYTL5Q8TDW5 730 aaPredicted RBP25.44■■□□□ 1.66
ACTB-203ENST00000417101 HERVK_113Q902F9 699 aa25.44■■□□□ 1.66
ACTB-203ENST00000417101 TAAR1Q96RJ0 339 aa25.44■■□□□ 1.66
ACTB-203ENST00000417101 PBX4Q9BYU1 374 aa25.44■■□□□ 1.66
ACTB-203ENST00000417101 CXXC1Q9P0U4 656 aaPredicted RBP25.44■■□□□ 1.66
ACTB-203ENST00000417101 VCANP13611 3396 aa25.43■■□□□ 1.66
ACTB-203ENST00000417101 A6NJR5 290 aa25.43■■□□□ 1.66
ACTB-203ENST00000417101 CYP2C9P11712 490 aa25.43■■□□□ 1.66
ACTB-203ENST00000417101 TTLL4Q14679 1199 aa25.43■■□□□ 1.66
ACTB-203ENST00000417101 FAM47CQ5HY64 1035 aa25.43■■□□□ 1.66
ACTB-203ENST00000417101 OTOP2Q7RTS6 562 aa25.43■■□□□ 1.66
ACTB-203ENST00000417101 MCF2L2Q86YR7 1114 aa25.43■■□□□ 1.66
ACTB-203ENST00000417101 MAF1Q9H063 256 aa25.43■■□□□ 1.66
ACTB-203ENST00000417101 MTIF3Q9H2K0 278 aaKnown RBP25.43■■□□□ 1.66
ACTB-203ENST00000417101 COL20A1Q9P218 1284 aa25.43■■□□□ 1.66
ACTB-203ENST00000417101 MRPL11Q9Y3B7 192 aaKnown RBP25.43■■□□□ 1.66
ACTB-203ENST00000417101 CHD9Q3L8U1 2897 aa25.42■■□□□ 1.66
ACTB-203ENST00000417101 ARIH2O95376 493 aa25.42■■□□□ 1.66
ACTB-203ENST00000417101 SUPT20HL2P0C7V6 817 aa25.42■■□□□ 1.66
ACTB-203ENST00000417101 NBPF20Q3BBV1 942 aa25.42■■□□□ 1.66
ACTB-203ENST00000417101 STAG2Q8N3U4 1231 aa25.42■■□□□ 1.66
ACTB-203ENST00000417101 NSUN6Q8TEA1 469 aaKnown RBP25.42■■□□□ 1.66
ACTB-203ENST00000417101 PPP1R13LQ8WUF5 828 aa25.42■■□□□ 1.66
ACTB-203ENST00000417101 SCLYQ96I15 445 aa25.42■■□□□ 1.66
ACTB-203ENST00000417101 KPNA6O60684 536 aa25.41■■□□□ 1.66
ACTB-203ENST00000417101 SEC23AQ15436 765 aa25.41■■□□□ 1.66
ACTB-203ENST00000417101 CYB5R4Q7L1T6 521 aa25.41■■□□□ 1.66
ACTB-203ENST00000417101 RMDN3Q96TC7 470 aa25.41■■□□□ 1.66
ACTB-203ENST00000417101 CCDC62Q6P9F0 684 aa25.4■■□□□ 1.66
ACTB-203ENST00000417101 SEPT14Q6ZU15 432 aa25.4■■□□□ 1.66
ACTB-203ENST00000417101 RPUSD2Q8IZ73 545 aaKnown RBP25.4■■□□□ 1.66
ACTB-203ENST00000417101 COL25A1Q9BXS0 654 aaPredicted RBP25.4■■□□□ 1.66
ACTB-203ENST00000417101 KLRF2D3W0D1 207 aa25.39■■□□□ 1.66
ACTB-203ENST00000417101 TRDNQ13061 729 aa25.39■■□□□ 1.66
ACTB-203ENST00000417101 STXBP2Q15833 593 aa25.39■■□□□ 1.66
ACTB-203ENST00000417101 RUFY2Q8WXA3 655 aa25.39■■□□□ 1.66
ACTB-203ENST00000417101 IWS1Q96ST2 819 aa25.39■■□□□ 1.66
ACTB-203ENST00000417101 MSRAQ9UJ68 235 aa25.39■■□□□ 1.66
ACTB-203ENST00000417101 CFBP00751 764 aa25.38■■□□□ 1.65
ACTB-203ENST00000417101 EIF2AK2P19525 551 aaKnown RBP25.38■■□□□ 1.65
ACTB-203ENST00000417101 CHMLP26374 656 aa25.38■■□□□ 1.65
ACTB-203ENST00000417101 CHMP4BP1P59074 171 aa25.38■■□□□ 1.65
ACTB-203ENST00000417101 IRX6P78412 446 aaPredicted RBP25.38■■□□□ 1.65
ACTB-203ENST00000417101 PTH1RQ03431 593 aa25.38■■□□□ 1.65
ACTB-203ENST00000417101 RAB30Q15771 203 aa25.38■■□□□ 1.65
ACTB-203ENST00000417101 LY6KQ17RY6 165 aa25.38■■□□□ 1.65
ACTB-203ENST00000417101 ARHGEF16Q5VV41 709 aa25.38■■□□□ 1.65
ACTB-203ENST00000417101 NFRKBQ6P4R8 1299 aa25.38■■□□□ 1.65
ACTB-203ENST00000417101 AFG1LQ8WV93 481 aa25.38■■□□□ 1.65
ACTB-203ENST00000417101 VWCEQ96DN2 955 aa25.38■■□□□ 1.65
ACTB-203ENST00000417101 AMNQ9BXJ7 453 aa25.38■■□□□ 1.65
ACTB-203ENST00000417101 MAD2L2Q9UI95 211 aa25.38■■□□□ 1.65
ACTB-203ENST00000417101 SCN10AQ9Y5Y9 1956 aa25.38■■□□□ 1.65
ACTB-203ENST00000417101 GH1P01241 217 aa25.37■■□□□ 1.65
ACTB-203ENST00000417101 CYP21A2P08686 494 aa25.37■■□□□ 1.65
ACTB-203ENST00000417101 CHST3Q7LGC8 479 aa25.37■■□□□ 1.65
ACTB-203ENST00000417101 U3KPZ7 1027 aaPredicted RBP25.37■■□□□ 1.65
ACTB-203ENST00000417101 OPLAHO14841 1288 aa25.36■■□□□ 1.65
ACTB-203ENST00000417101 ARHGAP1Q07960 439 aa25.36■■□□□ 1.65
ACTB-203ENST00000417101 PXMP2Q9NR77 195 aa25.36■■□□□ 1.65
ACTB-203ENST00000417101 SLC4A7Q9Y6M7 1214 aa25.36■■□□□ 1.65
ACTB-203ENST00000417101 PALM3A6NDB9 673 aaPredicted RBP25.35■■□□□ 1.65
ACTB-203ENST00000417101 ZBBXA8MT70 800 aa25.35■■□□□ 1.65
ACTB-203ENST00000417101 IFIT3O14879 490 aaKnown RBP25.35■■□□□ 1.65
ACTB-203ENST00000417101 PPP1R11O60927 126 aaPredicted RBP25.35■■□□□ 1.65
ACTB-203ENST00000417101 MMP3P08254 477 aa25.35■■□□□ 1.65
ACTB-203ENST00000417101 PTPN11Q06124 597 aaPredicted RBP25.35■■□□□ 1.65
ACTB-203ENST00000417101 DEFB128Q7Z7B8 93 aa25.35■■□□□ 1.65
ACTB-203ENST00000417101 MTMR8Q96EF0 704 aa25.35■■□□□ 1.65
ACTB-203ENST00000417101 NKX2-4Q9H2Z4 354 aa25.35■■□□□ 1.65
ACTB-203ENST00000417101 PRDM12Q9H4Q4 367 aa25.35■■□□□ 1.65
ACTB-203ENST00000417101 TAF6LQ9Y6J9 622 aa25.35■■□□□ 1.65
ACTB-203ENST00000417101 CHD7Q9P2D1 2997 aa25.34■■□□□ 1.65
ACTB-203ENST00000417101 MYH6P13533 1939 aa25.34■■□□□ 1.65
ACTB-203ENST00000417101 ZBTB5O15062 677 aa25.34■■□□□ 1.65
ACTB-203ENST00000417101 EIF3JO75822 258 aaKnown RBP25.34■■□□□ 1.65
ACTB-203ENST00000417101 NR3C2P08235 984 aa25.34■■□□□ 1.65
ACTB-203ENST00000417101 PFKMP08237 780 aa25.34■■□□□ 1.65
ACTB-203ENST00000417101 HSD17B4P51659 736 aa25.34■■□□□ 1.65
ACTB-203ENST00000417101 USP38Q8NB14 1042 aa25.34■■□□□ 1.65
ACTB-203ENST00000417101 GAS2L1Q99501 681 aaPredicted RBP25.34■■□□□ 1.65
ACTB-203ENST00000417101 NOD1Q9Y239 953 aa25.34■■□□□ 1.65
ACTB-203ENST00000417101 YBX2Q9Y2T7 364 aaKnown RBP25.34■■□□□ 1.65
ACTB-203ENST00000417101 PCDHA1Q9Y5I3 950 aa25.34■■□□□ 1.65
ACTB-203ENST00000417101 RABGGTBP53611 331 aa25.33■■□□□ 1.65
ACTB-203ENST00000417101 MYO9BQ13459 2157 aa25.33■■□□□ 1.65
ACTB-203ENST00000417101 SLC35G1Q2M3R5 365 aa25.33■■□□□ 1.65
ACTB-203ENST00000417101 RALYLQ86SE5 291 aaKnown RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms