RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 SHCBP1Q8NEM2 672 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 CHST13Q8NET6 341 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 IL31RAQ8NI17 732 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 SYTL5Q8TDW5 730 aaPredicted RBP9.25□□□□□ -0.93
MDC1-203ENST00000417033 CUL5Q93034 780 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 CWC22Q9HCG8 908 aaKnown RBP9.25□□□□□ -0.93
MDC1-203ENST00000417033 C6orf50Q9HD87 102 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 CYP39A1Q9NYL5 469 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 BOLA1Q9Y3E2 137 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 KIF3AQ9Y496 699 aa9.25□□□□□ -0.93
MDC1-203ENST00000417033 POTEFA5A3E0 1075 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 GCOM1H8Y6P7 765 aaPredicted RBP9.24□□□□□ -0.93
MDC1-203ENST00000417033 GPR25O00155 361 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 COBLO75128 1261 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 SLC25A27O95847 323 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 F13A1P00488 732 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 POLR2MP0CAP2 368 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 ZSCAN22P10073 491 aaPredicted RBP9.24□□□□□ -0.93
MDC1-203ENST00000417033 XBP1P17861 261 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 PDCP20941 246 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 GHRHRQ02643 423 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 FOXD4L6Q3SYB3 417 aaPredicted RBP9.24□□□□□ -0.93
MDC1-203ENST00000417033 FOXD4L3Q6VB84 417 aaPredicted RBP9.24□□□□□ -0.93
MDC1-203ENST00000417033 RNF207Q6ZRF8 634 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 PIK3AP1Q6ZUJ8 805 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 REXO1Q8N1G1 1221 aaKnown RBP9.24□□□□□ -0.93
MDC1-203ENST00000417033 CD99L2Q8TCZ2 262 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 CCDC12Q8WUD4 166 aaPredicted RBP9.24□□□□□ -0.93
MDC1-203ENST00000417033 TAAR1Q96RJ0 339 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 MMP19Q99542 508 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 CFHR5Q9BXR6 569 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 ANO3Q9BYT9 981 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 FTOQ9C0B1 505 aaKnown RBP eCLIP9.24□□□□□ -0.93
MDC1-203ENST00000417033 WBP1LQ9NX94 342 aa9.24□□□□□ -0.93
MDC1-203ENST00000417033 RBBP6Q7Z6E9 1792 aaKnown RBP9.24□□□□□ -0.93
MDC1-203ENST00000417033 DNAJC25-GNG10A0A024R161 153 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 SOWAHBA6NEL2 793 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 PIK3CDO00329 1044 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 EIF2AK2P19525 551 aaKnown RBP9.23□□□□□ -0.93
MDC1-203ENST00000417033 PTPREP23469 700 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 ADORA2AP29274 412 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 GNA11P29992 359 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 CCNA1P78396 465 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 LACTBP83111 547 aaPredicted RBP9.23□□□□□ -0.93
MDC1-203ENST00000417033 INF2Q27J81 1249 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.23□□□□□ -0.93
MDC1-203ENST00000417033 PLEKHH3Q7Z736 793 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 ANKRD35Q8N283 1001 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 NPLOC4Q8TAT6 608 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 ZNF296Q8WUU4 475 aaPredicted RBP9.23□□□□□ -0.93
MDC1-203ENST00000417033 TRIM47Q96LD4 638 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 MROH8Q9H579 483 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 FBXO40Q9UH90 709 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 GABRQQ9UN88 632 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 PLXNB2O15031 1838 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 RPTORQ8N122 1335 aa9.23□□□□□ -0.93
MDC1-203ENST00000417033 DOCK3Q8IZD9 2030 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 POTEB2H3BUK9 544 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 TNPO2O14787 897 aaKnown RBP9.22□□□□□ -0.93
MDC1-203ENST00000417033 FCER1AP12319 257 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 ATP2B1P20020 1258 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 U2AF2P26368 475 aaKnown RBP eCLIP9.22□□□□□ -0.931e-9■■■□□ 18.9
MDC1-203ENST00000417033 MAPK4P31152 587 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 COPB2P35606 906 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 PSMC4P43686 418 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 TOB1P50616 345 aaPredicted RBP9.22□□□□□ -0.93
MDC1-203ENST00000417033 MRPL12P52815 198 aaKnown RBP9.22□□□□□ -0.93
MDC1-203ENST00000417033 SP3Q02447 781 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 MAP2K1Q02750 393 aaPredicted RBP9.22□□□□□ -0.93
MDC1-203ENST00000417033 TRAF1Q13077 416 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 GRB14Q14449 540 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 KCTD2Q14681 263 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 SAFBQ15424 915 aaKnown RBP eCLIP9.22□□□□□ -0.93
MDC1-203ENST00000417033 MORN1Q5T089 497 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 MCF2L2Q86YR7 1114 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 NOSTRINQ8IVI9 506 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 CCAR1Q8IX12 1150 aaKnown RBP9.22□□□□□ -0.93
MDC1-203ENST00000417033 FAM133AQ8N9E0 248 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 TBCKQ8TEA7 893 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 TMEM121BQ9BXQ6 578 aaPredicted RBP9.22□□□□□ -0.93
MDC1-203ENST00000417033 FOXP1Q9H334 677 aaPredicted RBP9.22□□□□□ -0.93
MDC1-203ENST00000417033 BRMS1Q9HCU9 246 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 SAGE1Q9NXZ1 904 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 CHMP5Q9NZZ3 219 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 PNMA2Q9UL42 364 aa9.22□□□□□ -0.93
MDC1-203ENST00000417033 CCDC194A0A1B0GVG4 234 aa9.21□□□□□ -0.94
MDC1-203ENST00000417033 FOXN1O15353 648 aa9.21□□□□□ -0.94
MDC1-203ENST00000417033 TDP2O95551 362 aa9.21□□□□□ -0.94
MDC1-203ENST00000417033 ALDH5A1P51649 535 aaPredicted RBP9.21□□□□□ -0.94
MDC1-203ENST00000417033 FCGRTP55899 365 aa9.21□□□□□ -0.94
MDC1-203ENST00000417033 PRKCZQ05513 592 aa9.21□□□□□ -0.94
MDC1-203ENST00000417033 AP3B2Q13367 1082 aa9.21□□□□□ -0.94
MDC1-203ENST00000417033 GNL2Q13823 731 aaKnown RBP9.21□□□□□ -0.94
MDC1-203ENST00000417033 NONOQ15233 471 aaKnown RBP eCLIP9.21□□□□□ -0.94
MDC1-203ENST00000417033 CCL14Q16627 93 aa9.21□□□□□ -0.94
MDC1-203ENST00000417033 ZNF792Q3KQV3 632 aa9.21□□□□□ -0.94
MDC1-203ENST00000417033 MYSM1Q5VVJ2 828 aa9.21□□□□□ -0.94
MDC1-203ENST00000417033 GALNT17Q6IS24 598 aa9.21□□□□□ -0.94
MDC1-203ENST00000417033 KRT25Q7Z3Z0 450 aa9.21□□□□□ -0.94
MDC1-203ENST00000417033 FAM177A1Q8N128 213 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms