RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 CWC22Q9HCG8 908 aaKnown RBP14.65□□□□□ -0.06
YIPF3-203ENST00000416380 PXMP2Q9NR77 195 aa14.65□□□□□ -0.06
YIPF3-203ENST00000416380 SLC5A4Q9NY91 659 aa14.65□□□□□ -0.06
YIPF3-203ENST00000416380 SEC63Q9UGP8 760 aaKnown RBP14.65□□□□□ -0.06
YIPF3-203ENST00000416380 GCOM1H8Y6P7 765 aaPredicted RBP14.64□□□□□ -0.07
YIPF3-203ENST00000416380 CTAGE5O15320 804 aa14.64□□□□□ -0.07
YIPF3-203ENST00000416380 DEXIO95424 95 aa14.64□□□□□ -0.07
YIPF3-203ENST00000416380 POLR2MP0CAP2 368 aa14.64□□□□□ -0.07
YIPF3-203ENST00000416380 PTGS1P23219 599 aa14.64□□□□□ -0.07
YIPF3-203ENST00000416380 MRPS9P82933 396 aaKnown RBP14.64□□□□□ -0.07
YIPF3-203ENST00000416380 VSIG10LQ86VR7 867 aa14.64□□□□□ -0.07
YIPF3-203ENST00000416380 ZSCAN31Q96LW9 406 aaPredicted RBP14.64□□□□□ -0.07
YIPF3-203ENST00000416380 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.64□□□□□ -0.07
YIPF3-203ENST00000416380 PSTPIP2Q9H939 334 aa14.64□□□□□ -0.07
YIPF3-203ENST00000416380 PDGFCQ9NRA1 345 aa14.64□□□□□ -0.07
YIPF3-203ENST00000416380 VPS54Q9P1Q0 977 aa14.64□□□□□ -0.07
YIPF3-203ENST00000416380 RBM27Q9P2N5 1060 aaKnown RBP14.64□□□□□ -0.07
YIPF3-203ENST00000416380 SMCO2A6NFE2 343 aa14.63□□□□□ -0.07
YIPF3-203ENST00000416380 GJB1P08034 283 aa14.63□□□□□ -0.07
YIPF3-203ENST00000416380 NKX3-2P78367 333 aa14.63□□□□□ -0.07
YIPF3-203ENST00000416380 SSRP1Q08945 709 aaKnown RBP14.63□□□□□ -0.07
YIPF3-203ENST00000416380 CUL4AQ13619 759 aa14.63□□□□□ -0.07
YIPF3-203ENST00000416380 ACVR2BQ13705 512 aa14.63□□□□□ -0.07
YIPF3-203ENST00000416380 PGM5Q15124 567 aa14.63□□□□□ -0.07
YIPF3-203ENST00000416380 MFSD14CQ5VZR4 134 aa14.63□□□□□ -0.07
YIPF3-203ENST00000416380 CCDC83Q8IWF9 413 aa14.63□□□□□ -0.07
YIPF3-203ENST00000416380 RMDN3Q96TC7 470 aa14.63□□□□□ -0.07
YIPF3-203ENST00000416380 SH3GLB2Q9NR46 395 aa14.63□□□□□ -0.07
YIPF3-203ENST00000416380 SH2B1Q9NRF2 756 aaPredicted RBP14.63□□□□□ -0.07
YIPF3-203ENST00000416380 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.62□□□□□ -0.07
YIPF3-203ENST00000416380 ASB14A6NK59 587 aa14.62□□□□□ -0.07
YIPF3-203ENST00000416380 SEPT4O43236 478 aa14.62□□□□□ -0.07
YIPF3-203ENST00000416380 NR3C2P08235 984 aa14.62□□□□□ -0.07
YIPF3-203ENST00000416380 GJA8P48165 433 aa14.62□□□□□ -0.07
YIPF3-203ENST00000416380 NAPAP54920 295 aa14.62□□□□□ -0.07
YIPF3-203ENST00000416380 UBXN2AP68543 259 aa14.62□□□□□ -0.07
YIPF3-203ENST00000416380 CCDC62Q6P9F0 684 aa14.62□□□□□ -0.07
YIPF3-203ENST00000416380 DAGLBQ8NCG7 672 aa14.62□□□□□ -0.07
YIPF3-203ENST00000416380 NSUN6Q8TEA1 469 aaKnown RBP14.62□□□□□ -0.07
YIPF3-203ENST00000416380 TNFRSF25Q93038 417 aa14.62□□□□□ -0.07
YIPF3-203ENST00000416380 LENG1Q96BZ8 264 aaPredicted RBP14.62□□□□□ -0.07
YIPF3-203ENST00000416380 IWS1Q96ST2 819 aa14.62□□□□□ -0.07
YIPF3-203ENST00000416380 LLPHQ9BRT6 129 aaKnown RBP14.62□□□□□ -0.07
YIPF3-203ENST00000416380 PHF20Q9BVI0 1012 aa14.62□□□□□ -0.07
YIPF3-203ENST00000416380 ABHD16BQ9H3Z7 469 aa14.62□□□□□ -0.07
YIPF3-203ENST00000416380 HMX1Q9NP08 348 aaPredicted RBP14.62□□□□□ -0.07
YIPF3-203ENST00000416380 TMEM260Q9NX78 707 aa14.62□□□□□ -0.07
YIPF3-203ENST00000416380 ADD3Q9UEY8 706 aaKnown RBP14.62□□□□□ -0.07
YIPF3-203ENST00000416380 OGDHLQ9ULD0 1010 aa14.62□□□□□ -0.07
YIPF3-203ENST00000416380 GNEQ9Y223 722 aaKnown RBP14.62□□□□□ -0.07
YIPF3-203ENST00000416380 MYH6P13533 1939 aa14.62□□□□□ -0.07
YIPF3-203ENST00000416380 CPLX1O14810 134 aa14.61□□□□□ -0.07
YIPF3-203ENST00000416380 ST18O60284 1047 aa14.61□□□□□ -0.07
YIPF3-203ENST00000416380 ARIH2O95376 493 aa14.61□□□□□ -0.07
YIPF3-203ENST00000416380 SGPL1O95470 568 aa14.61□□□□□ -0.07
YIPF3-203ENST00000416380 MYCP01106 439 aaPredicted RBP14.61□□□□□ -0.07
YIPF3-203ENST00000416380 EIF2AK2P19525 551 aaKnown RBP14.61□□□□□ -0.07
YIPF3-203ENST00000416380 IRX5P78411 483 aaPredicted RBP14.61□□□□□ -0.07
YIPF3-203ENST00000416380 SEMA3FQ13275 785 aa14.61□□□□□ -0.07
YIPF3-203ENST00000416380 CCSAPQ6IQ19 270 aaPredicted RBP14.61□□□□□ -0.07
YIPF3-203ENST00000416380 FBXO16Q8IX29 292 aaPredicted RBP14.61□□□□□ -0.07
YIPF3-203ENST00000416380 FAM177A1Q8N128 213 aaPredicted RBP14.61□□□□□ -0.07
YIPF3-203ENST00000416380 SNX21Q969T3 373 aa14.61□□□□□ -0.07
YIPF3-203ENST00000416380 RNF208Q9H0X6 261 aa14.61□□□□□ -0.07
YIPF3-203ENST00000416380 ORC3Q9UBD5 711 aaPredicted RBP14.61□□□□□ -0.07
YIPF3-203ENST00000416380 DDX20Q9UHI6 824 aaKnown RBP14.61□□□□□ -0.07
YIPF3-203ENST00000416380 ADAMTS4O75173 837 aa14.6□□□□□ -0.07
YIPF3-203ENST00000416380 CDKL5O76039 1030 aa14.6□□□□□ -0.07
YIPF3-203ENST00000416380 SMPD1P17405 629 aa14.6□□□□□ -0.07
YIPF3-203ENST00000416380 EN2P19622 333 aaPredicted RBP14.6□□□□□ -0.07
YIPF3-203ENST00000416380 MCM2P49736 904 aa14.6□□□□□ -0.07
YIPF3-203ENST00000416380 ADCY7P51828 1080 aa14.6□□□□□ -0.07
YIPF3-203ENST00000416380 CCDC144BQ3MJ40 725 aa14.6□□□□□ -0.07
YIPF3-203ENST00000416380 FCHSD1Q86WN1 690 aa14.6□□□□□ -0.07
YIPF3-203ENST00000416380 U2AF1L4Q8WU68 220 aaKnown RBP14.6□□□□□ -0.07
YIPF3-203ENST00000416380 CUL5Q93034 780 aa14.6□□□□□ -0.07
YIPF3-203ENST00000416380 ZFP91Q96JP5 570 aaPredicted RBP14.6□□□□□ -0.07
YIPF3-203ENST00000416380 INPP4AQ96PE3 977 aaPredicted RBP14.6□□□□□ -0.07
YIPF3-203ENST00000416380 DEFB118Q96PH6 123 aa14.6□□□□□ -0.07
YIPF3-203ENST00000416380 VTA1Q9NP79 307 aa14.6□□□□□ -0.07
YIPF3-203ENST00000416380 PCDHA6Q9UN73 950 aa14.6□□□□□ -0.07
YIPF3-203ENST00000416380 KCNJ14Q9UNX9 436 aa14.6□□□□□ -0.07
YIPF3-203ENST00000416380 PCDHA8Q9Y5H6 950 aa14.6□□□□□ -0.07
YIPF3-203ENST00000416380 ITGB5P18084 799 aa14.59□□□□□ -0.07
YIPF3-203ENST00000416380 SREBF1P36956 1147 aa14.59□□□□□ -0.07
YIPF3-203ENST00000416380 ADCYAP1R1P41586 468 aa14.59□□□□□ -0.07
YIPF3-203ENST00000416380 MRPL12P52815 198 aaKnown RBP14.59□□□□□ -0.07
YIPF3-203ENST00000416380 SP2Q02086 613 aa14.59□□□□□ -0.07
YIPF3-203ENST00000416380 EARS2Q5JPH6 523 aaKnown RBP14.59□□□□□ -0.07
YIPF3-203ENST00000416380 PCNX4Q63HM2 1172 aa14.59□□□□□ -0.07
YIPF3-203ENST00000416380 TRIM22Q8IYM9 498 aa14.59□□□□□ -0.07
YIPF3-203ENST00000416380 RASGRP4Q8TDF6 673 aa14.59□□□□□ -0.07
YIPF3-203ENST00000416380 OXER1Q8TDS5 423 aa14.59□□□□□ -0.07
YIPF3-203ENST00000416380 PGBD1Q96JS3 809 aa14.59□□□□□ -0.07
YIPF3-203ENST00000416380 UPF3AQ9H1J1 476 aaKnown RBP14.59□□□□□ -0.07
YIPF3-203ENST00000416380 BCAS3Q9H6U6 928 aa14.59□□□□□ -0.07
YIPF3-203ENST00000416380 BIN2Q9UBW5 565 aaPredicted RBP14.59□□□□□ -0.07
YIPF3-203ENST00000416380 PCDHA4Q9UN74 947 aa14.59□□□□□ -0.07
YIPF3-203ENST00000416380 MCM3APO60318 1980 aa14.58□□□□□ -0.07
YIPF3-203ENST00000416380 MYADML2A6NDP7 307 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms