RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 LSG1Q9H089 658 aaKnown RBP29.02■■■□□ 2.24
HLA-C-204ENST00000415537 COL20A1Q9P218 1284 aa29.02■■■□□ 2.24
HLA-C-204ENST00000415537 BAZ2BQ9UIF8 2168 aaKnown RBP29.01■■■□□ 2.23
HLA-C-204ENST00000415537 KIAA1217Q5T5P2 1943 aa29.01■■■□□ 2.23
HLA-C-204ENST00000415537 CD4P01730 458 aa29.01■■■□□ 2.23
HLA-C-204ENST00000415537 MYL3P08590 195 aa29.01■■■□□ 2.23
HLA-C-204ENST00000415537 ANTXR2P58335 489 aa29.01■■■□□ 2.23
HLA-C-204ENST00000415537 PSMC6P62333 389 aa29.01■■■□□ 2.23
HLA-C-204ENST00000415537 TROAPQ12815 778 aa29.01■■■□□ 2.23
HLA-C-204ENST00000415537 IGDCC4Q8TDY8 1250 aa29.01■■■□□ 2.23
HLA-C-204ENST00000415537 RNPC3Q96LT9 517 aaKnown RBP29.01■■■□□ 2.23
HLA-C-204ENST00000415537 RIOX1Q9H6W3 641 aa29.01■■■□□ 2.23
HLA-C-204ENST00000415537 ANO2Q9NQ90 1003 aa29.01■■■□□ 2.23
HLA-C-204ENST00000415537 EPHB4P54760 987 aa29■■■□□ 2.23
HLA-C-204ENST00000415537 BMP2KLQ5H9B9 411 aa29■■■□□ 2.23
HLA-C-204ENST00000415537 SEPT14Q6ZU15 432 aa29■■■□□ 2.23
HLA-C-204ENST00000415537 TMEM199Q8N511 208 aa29■■■□□ 2.23
HLA-C-204ENST00000415537 PPP1R12CQ9BZL4 782 aa29■■■□□ 2.23
HLA-C-204ENST00000415537 MAP3K20Q9NYL2 800 aaKnown RBP29■■■□□ 2.23
HLA-C-204ENST00000415537 GRIN2DO15399 1336 aa28.99■■■□□ 2.23
HLA-C-204ENST00000415537 EIF2AK2P19525 551 aaKnown RBP28.99■■■□□ 2.23
HLA-C-204ENST00000415537 PPIGQ13427 754 aaKnown RBP eCLIP28.99■■■□□ 2.23
HLA-C-204ENST00000415537 SAMD3Q8N6K7 520 aa28.99■■■□□ 2.23
HLA-C-204ENST00000415537 COPS5Q92905 334 aa28.99■■■□□ 2.23
HLA-C-204ENST00000415537 PIGSQ96S52 555 aa28.99■■■□□ 2.23
HLA-C-204ENST00000415537 MTA3Q9BTC8 594 aa28.99■■■□□ 2.23
HLA-C-204ENST00000415537 PPP1R11O60927 126 aaPredicted RBP28.98■■■□□ 2.23
HLA-C-204ENST00000415537 MCM5P33992 734 aa28.98■■■□□ 2.23
HLA-C-204ENST00000415537 HSD17B4P51659 736 aa28.98■■■□□ 2.23
HLA-C-204ENST00000415537 PURAQ00577 322 aaKnown RBP28.98■■■□□ 2.23
HLA-C-204ENST00000415537 FAM109BQ6ICB4 259 aaPredicted RBP28.98■■■□□ 2.23
HLA-C-204ENST00000415537 MTG1Q9BT17 334 aaPredicted RBP28.98■■■□□ 2.23
HLA-C-204ENST00000415537 MTMR10Q9NXD2 777 aa28.98■■■□□ 2.23
HLA-C-204ENST00000415537 SLC27A2O14975 620 aa28.97■■■□□ 2.23
HLA-C-204ENST00000415537 PRC1O43663 620 aa28.97■■■□□ 2.23
HLA-C-204ENST00000415537 KPNA6O60684 536 aa28.97■■■□□ 2.23
HLA-C-204ENST00000415537 NFXL1Q6ZNB6 911 aa28.97■■■□□ 2.23
HLA-C-204ENST00000415537 SKAP1Q86WV1 359 aa28.97■■■□□ 2.23
HLA-C-204ENST00000415537 TMTC2Q8N394 836 aa28.97■■■□□ 2.23
HLA-C-204ENST00000415537 CTCFLQ8NI51 663 aaPredicted RBP28.97■■■□□ 2.23
HLA-C-204ENST00000415537 PXMP2Q9NR77 195 aa28.97■■■□□ 2.23
HLA-C-204ENST00000415537 PNMA6FA0A0J9YX94 578 aa28.96■■■□□ 2.23
HLA-C-204ENST00000415537 OPLAHO14841 1288 aa28.96■■■□□ 2.23
HLA-C-204ENST00000415537 B4GALT4O60513 344 aa28.96■■■□□ 2.23
HLA-C-204ENST00000415537 ARIH2O95376 493 aa28.96■■■□□ 2.23
HLA-C-204ENST00000415537 NR3C2P08235 984 aa28.96■■■□□ 2.23
HLA-C-204ENST00000415537 ZNF697Q5TEC3 545 aa28.96■■■□□ 2.23
HLA-C-204ENST00000415537 ZNF654Q8IZM8 581 aa28.96■■■□□ 2.23
HLA-C-204ENST00000415537 TMEM87BQ96K49 555 aa28.96■■■□□ 2.23
HLA-C-204ENST00000415537 MAP3K14Q99558 947 aa28.96■■■□□ 2.23
HLA-C-204ENST00000415537 TRPV6Q9H1D0 765 aa28.96■■■□□ 2.23
HLA-C-204ENST00000415537 HIPK3Q9H422 1215 aa28.96■■■□□ 2.23
HLA-C-204ENST00000415537 LY9Q9HBG7 655 aa28.96■■■□□ 2.23
HLA-C-204ENST00000415537 A6NJR5 290 aa28.95■■■□□ 2.22
HLA-C-204ENST00000415537 CYTH3O43739 400 aa28.95■■■□□ 2.22
HLA-C-204ENST00000415537 EIF3JO75822 258 aaKnown RBP28.95■■■□□ 2.22
HLA-C-204ENST00000415537 CSF2RAP15509 400 aa28.95■■■□□ 2.22
HLA-C-204ENST00000415537 KIF5BP33176 963 aa28.95■■■□□ 2.22
HLA-C-204ENST00000415537 SMAD3P84022 425 aaKnown RBP28.95■■■□□ 2.22
HLA-C-204ENST00000415537 GHRHRQ02643 423 aa28.95■■■□□ 2.22
HLA-C-204ENST00000415537 NECTIN1Q15223 517 aa28.95■■■□□ 2.22
HLA-C-204ENST00000415537 LY6KQ17RY6 165 aa28.95■■■□□ 2.22
HLA-C-204ENST00000415537 SLC35G1Q2M3R5 365 aa28.95■■■□□ 2.22
HLA-C-204ENST00000415537 CREB3L3Q68CJ9 461 aa28.95■■■□□ 2.22
HLA-C-204ENST00000415537 CCDC69A6NI79 296 aa28.94■■■□□ 2.22
HLA-C-204ENST00000415537 DDAH1O94760 285 aa28.94■■■□□ 2.22
HLA-C-204ENST00000415537 GH1P01241 217 aa28.94■■■□□ 2.22
HLA-C-204ENST00000415537 CYP2C18P33260 490 aa28.94■■■□□ 2.22
HLA-C-204ENST00000415537 CCDC62Q6P9F0 684 aa28.94■■■□□ 2.22
HLA-C-204ENST00000415537 ALDH8A1Q9H2A2 487 aaPredicted RBP28.94■■■□□ 2.22
HLA-C-204ENST00000415537 GCOM1H8Y6P7 765 aaPredicted RBP28.93■■■□□ 2.22
HLA-C-204ENST00000415537 SUPT20HL2P0C7V6 817 aa28.93■■■□□ 2.22
HLA-C-204ENST00000415537 POLR2MP0CAP2 368 aa28.93■■■□□ 2.22
HLA-C-204ENST00000415537 HOXA13P31271 388 aaPredicted RBP28.93■■■□□ 2.22
HLA-C-204ENST00000415537 RNF20Q5VTR2 975 aa28.93■■■□□ 2.22
HLA-C-204ENST00000415537 PIBF1Q8WXW3 757 aa28.93■■■□□ 2.22
HLA-C-204ENST00000415537 FAM161BQ96MY7 647 aa28.93■■■□□ 2.22
HLA-C-204ENST00000415537 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.93■■■□□ 2.22
HLA-C-204ENST00000415537 MYL10Q9BUA6 226 aa28.93■■■□□ 2.22
HLA-C-204ENST00000415537 LAMA2P24043 3122 aaKnown RBP28.92■■■□□ 2.22
HLA-C-204ENST00000415537 MYCLP12524 364 aaPredicted RBP28.92■■■□□ 2.22
HLA-C-204ENST00000415537 FAM47CQ5HY64 1035 aa28.92■■■□□ 2.22
HLA-C-204ENST00000415537 PDCD2LQ9BRP1 358 aa28.92■■■□□ 2.22
HLA-C-204ENST00000415537 MRVI1Q9Y6F6 885 aa28.92■■■□□ 2.22
HLA-C-204ENST00000415537 MYH7BA7E2Y1 1941 aa28.92■■■□□ 2.22
HLA-C-204ENST00000415537 SCN10AQ9Y5Y9 1956 aa28.92■■■□□ 2.22
HLA-C-204ENST00000415537 GNAQP50148 359 aa28.91■■■□□ 2.22
HLA-C-204ENST00000415537 NBPF20Q3BBV1 942 aa28.91■■■□□ 2.22
HLA-C-204ENST00000415537 AFG1LQ8WV93 481 aa28.91■■■□□ 2.22
HLA-C-204ENST00000415537 RRP36Q96EU6 259 aaKnown RBP28.91■■■□□ 2.22
HLA-C-204ENST00000415537 LZTS2Q9BRK4 669 aa28.91■■■□□ 2.22
HLA-C-204ENST00000415537 STXBP5LQ9Y2K9 1186 aa28.91■■■□□ 2.22
HLA-C-204ENST00000415537 SH2B2O14492 632 aaPredicted RBP28.9■■■□□ 2.22
HLA-C-204ENST00000415537 CALM1P0DP23 149 aa28.9■■■□□ 2.22
HLA-C-204ENST00000415537 CALM2P0DP24 149 aa28.9■■■□□ 2.22
HLA-C-204ENST00000415537 CALM3P0DP25 149 aa28.9■■■□□ 2.22
HLA-C-204ENST00000415537 ACRP10323 421 aa28.9■■■□□ 2.22
HLA-C-204ENST00000415537 TMEM240Q5SV17 173 aa28.9■■■□□ 2.22
HLA-C-204ENST00000415537 NFRKBQ6P4R8 1299 aa28.9■■■□□ 2.22
HLA-C-204ENST00000415537 PSRC1Q6PGN9 363 aaPredicted RBP28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms