RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 HSPA4P34932 840 aa10.89□□□□□ -0.67
LINC01888-201ENST00000415138 USP8P40818 1118 aa10.89□□□□□ -0.67
LINC01888-201ENST00000415138 SHROOM1Q2M3G4 852 aaPredicted RBP10.89□□□□□ -0.67
LINC01888-201ENST00000415138 KLHL40Q2TBA0 621 aa10.89□□□□□ -0.67
LINC01888-201ENST00000415138 SH3D19Q5HYK7 790 aa10.89□□□□□ -0.67
LINC01888-201ENST00000415138 TEX35Q5T0J7 233 aa10.89□□□□□ -0.67
LINC01888-201ENST00000415138 GAS2L3Q86XJ1 694 aa10.89□□□□□ -0.67
LINC01888-201ENST00000415138 DGKHQ86XP1 1220 aa10.89□□□□□ -0.67
LINC01888-201ENST00000415138 LPAR1Q92633 364 aa10.89□□□□□ -0.67
LINC01888-201ENST00000415138 ZSCAN10Q96SZ4 725 aaPredicted RBP10.89□□□□□ -0.67
LINC01888-201ENST00000415138 KIAA1683Q9H0B3 1180 aa10.89□□□□□ -0.67
LINC01888-201ENST00000415138 ZFYVE28Q9HCC9 887 aa10.89□□□□□ -0.67
LINC01888-201ENST00000415138 FAM53CQ9NYF3 392 aa10.89□□□□□ -0.67
LINC01888-201ENST00000415138 TMX2Q9Y320 296 aa10.89□□□□□ -0.67
LINC01888-201ENST00000415138 CTDP1Q9Y5B0 961 aaPredicted RBP10.89□□□□□ -0.67
LINC01888-201ENST00000415138 LOC285556D6RIA3 1793 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 USP17L15C9J2P7 530 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 USP17L13C9JLJ4 530 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 USP17L11C9JVI0 530 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 USP17L18D6R9N7 530 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 USP17L22D6RA61 530 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 USP17L17D6RBQ6 530 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 USP17L19D6RCP7 530 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 USP17L20D6RJB6 530 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 MYO1CO00159 1063 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 PDHXO00330 501 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 WNT7AO00755 349 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 TRPA1O75762 1119 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 TOP1P11387 765 aaKnown RBP10.88□□□□□ -0.67
LINC01888-201ENST00000415138 PAX7P23759 505 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 HNRNPH2P55795 449 aaKnown RBP10.88□□□□□ -0.67
LINC01888-201ENST00000415138 USP17L24Q0WX57 530 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 WTAPQ15007 396 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 PPP2R5AQ15172 486 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 TAF1CQ15572 869 aaPredicted RBP10.88□□□□□ -0.67
LINC01888-201ENST00000415138 IFIT1BQ5T764 474 aaKnown RBP10.88□□□□□ -0.67
LINC01888-201ENST00000415138 BLOC1S2Q6QNY1 142 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 SYNE3Q6ZMZ3 975 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 NFXL1Q6ZNB6 911 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 ACER1Q8TDN7 264 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 SMCR8Q8TEV9 937 aaPredicted RBP10.88□□□□□ -0.67
LINC01888-201ENST00000415138 BRI3BPQ8WY22 251 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 ZIC5Q96T25 663 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 TANGO6Q9C0B7 1094 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 VCPKMTQ9H867 229 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 ZCCHC17Q9NP64 241 aaKnown RBP10.88□□□□□ -0.67
LINC01888-201ENST00000415138 ETAA1Q9NY74 926 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 SYNPO2Q9UMS6 1093 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 AGTPBP1Q9UPW5 1226 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 MTMR7Q9Y216 660 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 PLIN4Q96Q06 1357 aa10.88□□□□□ -0.67
LINC01888-201ENST00000415138 TNKSO95271 1327 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 IGKV6D-41A0A0C4DH26 115 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 CCDC69A6NI79 296 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 BTBD19C9JJ37 291 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 F5H6K3 240 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 PRC1O43663 620 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 NMT2O60551 498 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 NDUFV2P19404 249 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 KLRC3Q07444 240 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 IKQ13123 557 aaPredicted RBP10.87□□□□□ -0.67
LINC01888-201ENST00000415138 GPS2Q13227 327 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 TSGA10IPQ3SY00 556 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 TMEM67Q5HYA8 995 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 C1QTNF12Q5T7M4 302 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 SLFN13Q68D06 897 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 CHST3Q7LGC8 479 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 CLEC10AQ8IUN9 316 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 FMNL3Q8IVF7 1028 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 SPICE1Q8N0Z3 855 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 LRRC47Q8N1G4 583 aaKnown RBP10.87□□□□□ -0.67
LINC01888-201ENST00000415138 TMEM87BQ96K49 555 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 JAKMIP1Q96N16 626 aaKnown RBP10.87□□□□□ -0.67
LINC01888-201ENST00000415138 PARK7Q99497 189 aaKnown RBP10.87□□□□□ -0.67
LINC01888-201ENST00000415138 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.87□□□□□ -0.67
LINC01888-201ENST00000415138 KDM4CQ9H3R0 1056 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 IL17RBQ9NRM6 502 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 RNF186Q9NXI6 227 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 PCDHGC3Q9UN70 934 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 SLC45A1Q9Y2W3 748 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 RPS6KL1Q9Y6S9 549 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 THSD7BQ9C0I4 1608 aa10.87□□□□□ -0.67
LINC01888-201ENST00000415138 A0A1W2PRG0 241 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 WDR46O15213 610 aaKnown RBP10.86□□□□□ -0.67
LINC01888-201ENST00000415138 ST8SIA5O15466 376 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 CPP00450 1065 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 SCP2P22307 547 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 SLC1A4P43007 532 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 MAGEA8P43361 318 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 TRAF1Q13077 416 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 NOLC1Q14978 699 aaKnown RBP eCLIP10.86□□□□□ -0.67
LINC01888-201ENST00000415138 PDCD2Q16342 344 aaPredicted RBP10.86□□□□□ -0.67
LINC01888-201ENST00000415138 WWC2Q6AWC2 1192 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 CLEC17AQ6ZS10 378 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 DHX32Q7L7V1 743 aaKnown RBP10.86□□□□□ -0.67
LINC01888-201ENST00000415138 CATIPQ7Z7H3 387 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 CCAR1Q8IX12 1150 aaKnown RBP10.86□□□□□ -0.67
LINC01888-201ENST00000415138 IQUBQ8NA54 791 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 KIF18AQ8NI77 898 aa10.86□□□□□ -0.67
LINC01888-201ENST00000415138 SNRNP27Q8WVK2 155 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms