RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 EIF5BO60841 1220 aaKnown RBP15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 MYL3P08590 195 aa15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 SCN5AQ14524 2016 aa15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 NBPF20Q3BBV1 942 aa15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 TSHZ3Q63HK5 1081 aa15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 TMCO2Q7Z6W1 182 aaPredicted RBP15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 FBXO16Q8IX29 292 aaPredicted RBP15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 KIFC2Q96AC6 838 aa15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 NSUN3Q9H649 340 aaKnown RBP15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 ANTXR1Q9H6X2 564 aa15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 A1CFQ9NQ94 594 aaKnown RBP15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 PDGFCQ9NRA1 345 aa15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 ATP8A2Q9NTI2 1148 aa15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 FAM86C1Q9NVL1 165 aa15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 FEM1BQ9UK73 627 aa15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 MYO5AQ9Y4I1 1855 aaKnown RBP15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 F5H6K3 240 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 NDUFB10O96000 172 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 CXCL10P02778 98 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 PDE6AP16499 860 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 PTGS1P23219 599 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 NUBP1P53384 320 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 KLRC3Q07444 240 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 TKFCQ3LXA3 575 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 TCEAL5Q5H9L2 206 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 SLC9C2Q5TAH2 1124 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 C12orf60Q5U649 245 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 CASC1Q6TDU7 716 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 KIAA1211Q6ZU35 1233 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 DNAJC2Q99543 621 aaKnown RBP15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 C17orf80Q9BSJ5 609 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 HOMER2Q9NSB8 354 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 PAG1Q9NWQ8 432 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 CLDND1Q9NY35 253 aa15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 RIF1Q5UIP0 2472 aaKnown RBP15.97■□□□□ 0.15
RAPGEF1-204ENST00000414781 TRIOO75962 3097 aa15.96■□□□□ 0.15
RAPGEF1-204ENST00000414781 HIP1O00291 1037 aa15.96■□□□□ 0.15
RAPGEF1-204ENST00000414781 SELPP16109 830 aa15.96■□□□□ 0.15
RAPGEF1-204ENST00000414781 RILPL2Q969X0 211 aa15.96■□□□□ 0.15
RAPGEF1-204ENST00000414781 DDRGK1Q96HY6 314 aa15.96■□□□□ 0.15
RAPGEF1-204ENST00000414781 NYAP2Q9P242 653 aa15.96■□□□□ 0.15
RAPGEF1-204ENST00000414781 SIP14410 1827 aa15.96■□□□□ 0.14
RAPGEF1-204ENST00000414781 C5orf42Q9H799 3197 aa15.95■□□□□ 0.14
RAPGEF1-204ENST00000414781 CACNA1BQ00975 2339 aa15.95■□□□□ 0.14
RAPGEF1-204ENST00000414781 GSPT1P15170 499 aaKnown RBP15.95■□□□□ 0.14
RAPGEF1-204ENST00000414781 SDSP20132 328 aa15.95■□□□□ 0.14
RAPGEF1-204ENST00000414781 SMAD4Q13485 552 aaKnown RBP15.95■□□□□ 0.14
RAPGEF1-204ENST00000414781 IKBKEQ14164 716 aa15.95■□□□□ 0.14
RAPGEF1-204ENST00000414781 ZSCAN25Q6NSZ9 544 aa15.95■□□□□ 0.14
RAPGEF1-204ENST00000414781 LRRC8DQ7L1W4 858 aa15.95■□□□□ 0.14
RAPGEF1-204ENST00000414781 EEPD1Q7L9B9 569 aa15.95■□□□□ 0.14
RAPGEF1-204ENST00000414781 LCORLQ8N3X6 602 aa15.95■□□□□ 0.14
RAPGEF1-204ENST00000414781 MORC4Q8TE76 937 aa15.95■□□□□ 0.14
RAPGEF1-204ENST00000414781 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.95■□□□□ 0.14
RAPGEF1-204ENST00000414781 RNF146Q9NTX7 359 aa15.95■□□□□ 0.14
RAPGEF1-204ENST00000414781 H3BNC9 293 aa15.94■□□□□ 0.14
RAPGEF1-204ENST00000414781 GOLIM4O00461 696 aa15.94■□□□□ 0.14
RAPGEF1-204ENST00000414781 ID4P47928 161 aa15.94■□□□□ 0.14
RAPGEF1-204ENST00000414781 RBL2Q08999 1139 aa15.94■□□□□ 0.14
RAPGEF1-204ENST00000414781 EPC2Q52LR7 807 aa15.94■□□□□ 0.14
RAPGEF1-204ENST00000414781 RPAINQ86UA6 219 aa15.94■□□□□ 0.14
RAPGEF1-204ENST00000414781 OR6J1Q8NGC5 347 aa15.94■□□□□ 0.14
RAPGEF1-204ENST00000414781 SP7Q8TDD2 431 aaPredicted RBP15.94■□□□□ 0.14
RAPGEF1-204ENST00000414781 WDR11Q9BZH6 1224 aa15.94■□□□□ 0.14
RAPGEF1-204ENST00000414781 ALG13Q9NP73 1137 aaKnown RBP15.94■□□□□ 0.14
RAPGEF1-204ENST00000414781 SYNPO2Q9UMS6 1093 aa15.94■□□□□ 0.14
RAPGEF1-204ENST00000414781 FAM186AA6NE01 2351 aa15.94■□□□□ 0.14
RAPGEF1-204ENST00000414781 ZNF532Q9HCE3 1301 aa15.94■□□□□ 0.14
RAPGEF1-204ENST00000414781 LOC102724159A0A0B4J2E5 919 aa15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 STXBP3O00186 592 aa15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 NKRFO15226 690 aaKnown RBP eCLIP15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 MBTPS2O43462 519 aa15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 ZFYP08048 801 aaPredicted RBP15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 LTBRP36941 435 aa15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 ZXDAP98168 799 aa15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 GPM6BQ13491 265 aa15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 GPNMBQ14956 572 aa15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 PWP2Q15269 919 aaKnown RBP15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 PTGISQ16647 500 aa15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 CTC1Q2NKJ3 1217 aa15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 KBTBD3Q8NAB2 608 aa15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 FSD1Q9BTV5 496 aa15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 MYH8P13535 1937 aa15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 SCN10AQ9Y5Y9 1956 aa15.93■□□□□ 0.14
RAPGEF1-204ENST00000414781 TET1Q8NFU7 2136 aa15.92■□□□□ 0.14
RAPGEF1-204ENST00000414781 PTPRSQ13332 1948 aa15.92■□□□□ 0.14
RAPGEF1-204ENST00000414781 CDC45O75419 566 aa15.92■□□□□ 0.14
RAPGEF1-204ENST00000414781 AMHP03971 560 aa15.92■□□□□ 0.14
RAPGEF1-204ENST00000414781 HTRA4P83105 476 aaPredicted RBP15.92■□□□□ 0.14
RAPGEF1-204ENST00000414781 TMEM63BQ5T3F8 832 aa15.92■□□□□ 0.14
RAPGEF1-204ENST00000414781 FAM117BQ6P1L5 589 aa15.92■□□□□ 0.14
RAPGEF1-204ENST00000414781 RUFY2Q8WXA3 655 aa15.92■□□□□ 0.14
RAPGEF1-204ENST00000414781 ARMT1Q9H993 441 aa15.92■□□□□ 0.14
RAPGEF1-204ENST00000414781 EPG5Q9HCE0 2579 aa15.91■□□□□ 0.14
RAPGEF1-204ENST00000414781 TCRBV5S4A2TA0A5A2 114 aa15.91■□□□□ 0.14
RAPGEF1-204ENST00000414781 PRR23AA6NEV1 266 aa15.91■□□□□ 0.14
RAPGEF1-204ENST00000414781 A6NJR5 290 aa15.91■□□□□ 0.14
RAPGEF1-204ENST00000414781 NBNO60934 754 aa15.91■□□□□ 0.14
RAPGEF1-204ENST00000414781 AVPR2P30518 371 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms