RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 MOV10L1Q9BXT6 1211 aaKnown RBP17.65■□□□□ 0.42
SHMT2-202ENST00000414700 PNMA3Q9UL41 463 aa17.65■□□□□ 0.42
SHMT2-202ENST00000414700 SLC45A1Q9Y2W3 748 aa17.65■□□□□ 0.42
SHMT2-202ENST00000414700 LCTP09848 1927 aa17.65■□□□□ 0.42
SHMT2-202ENST00000414700 SPDYE3A6NKU9 549 aa17.65■□□□□ 0.42
SHMT2-202ENST00000414700 YEATS4O95619 227 aa17.65■□□□□ 0.42
SHMT2-202ENST00000414700 TRAPPC10P48553 1259 aa17.65■□□□□ 0.42
SHMT2-202ENST00000414700 SLC39A14Q15043 492 aa17.65■□□□□ 0.42
SHMT2-202ENST00000414700 UTP14CQ5TAP6 766 aaKnown RBP17.65■□□□□ 0.42
SHMT2-202ENST00000414700 CAVIN1Q6NZI2 390 aaKnown RBP17.65■□□□□ 0.42
SHMT2-202ENST00000414700 CCDC39Q9UFE4 941 aa17.65■□□□□ 0.42
SHMT2-202ENST00000414700 ELP1O95163 1332 aa17.64■□□□□ 0.41
SHMT2-202ENST00000414700 MANSC4A6NHS7 340 aaPredicted RBP17.64■□□□□ 0.41
SHMT2-202ENST00000414700 SPTLC2O15270 562 aa17.64■□□□□ 0.41
SHMT2-202ENST00000414700 UBXN2AP68543 259 aa17.64■□□□□ 0.41
SHMT2-202ENST00000414700 AP3B2Q13367 1082 aa17.64■□□□□ 0.41
SHMT2-202ENST00000414700 ANKRD13CQ8N6S4 541 aa17.64■□□□□ 0.41
SHMT2-202ENST00000414700 CRYGNQ8WXF5 182 aa17.64■□□□□ 0.41
SHMT2-202ENST00000414700 CCDC102AQ96A19 550 aa17.64■□□□□ 0.41
SHMT2-202ENST00000414700 HHIPL1Q96JK4 782 aa17.64■□□□□ 0.41
SHMT2-202ENST00000414700 RABGAP1Q9Y3P9 1069 aa17.64■□□□□ 0.41
SHMT2-202ENST00000414700 CCNT1O60563 726 aaKnown RBP17.64■□□□□ 0.41
SHMT2-202ENST00000414700 TDP2O95551 362 aa17.64■□□□□ 0.41
SHMT2-202ENST00000414700 HTRA3P83110 453 aa17.64■□□□□ 0.41
SHMT2-202ENST00000414700 PTGDRQ13258 359 aa17.64■□□□□ 0.41
SHMT2-202ENST00000414700 RNF207Q6ZRF8 634 aa17.64■□□□□ 0.41
SHMT2-202ENST00000414700 RIOX2Q8IUF8 465 aa17.64■□□□□ 0.41
SHMT2-202ENST00000414700 A1CFQ9NQ94 594 aaKnown RBP17.64■□□□□ 0.41
SHMT2-202ENST00000414700 PCDHA7Q9UN72 937 aa17.64■□□□□ 0.41
SHMT2-202ENST00000414700 ME1P48163 572 aa17.63■□□□□ 0.41
SHMT2-202ENST00000414700 APLP1P51693 650 aa17.63■□□□□ 0.41
SHMT2-202ENST00000414700 ERVK-9P63128 1117 aa17.63■□□□□ 0.41
SHMT2-202ENST00000414700 ERVK-24P63145 666 aa17.63■□□□□ 0.41
SHMT2-202ENST00000414700 GHRHRQ02643 423 aa17.63■□□□□ 0.41
SHMT2-202ENST00000414700 GRIN1Q05586 938 aa17.63■□□□□ 0.41
SHMT2-202ENST00000414700 BAATQ14032 418 aaPredicted RBP17.63■□□□□ 0.41
SHMT2-202ENST00000414700 NCAPG2Q86XI2 1143 aa17.63■□□□□ 0.41
SHMT2-202ENST00000414700 MCF2L2Q86YR7 1114 aa17.63■□□□□ 0.41
SHMT2-202ENST00000414700 SYTL5Q8TDW5 730 aaPredicted RBP17.63■□□□□ 0.41
SHMT2-202ENST00000414700 TMEM60Q9H2L4 133 aa17.63■□□□□ 0.41
SHMT2-202ENST00000414700 ACAD9Q9H845 621 aa17.63■□□□□ 0.41
SHMT2-202ENST00000414700 PNMA2Q9UL42 364 aa17.63■□□□□ 0.41
SHMT2-202ENST00000414700 FOSP01100 380 aaPredicted RBP17.62■□□□□ 0.41
SHMT2-202ENST00000414700 ERCC3P19447 782 aa17.62■□□□□ 0.41
SHMT2-202ENST00000414700 ARHGAP4P98171 946 aa17.62■□□□□ 0.41
SHMT2-202ENST00000414700 IFNL1Q8IU54 200 aa17.62■□□□□ 0.41
SHMT2-202ENST00000414700 GPT2Q8TD30 523 aa17.62■□□□□ 0.41
SHMT2-202ENST00000414700 ZFP91Q96JP5 570 aaPredicted RBP17.62■□□□□ 0.41
SHMT2-202ENST00000414700 CLIC6Q96NY7 704 aa17.62■□□□□ 0.41
SHMT2-202ENST00000414700 CCDC94Q9BW85 323 aaPredicted RBP17.62■□□□□ 0.41
SHMT2-202ENST00000414700 PORCNQ9H237 461 aa17.62■□□□□ 0.41
SHMT2-202ENST00000414700 CREBZFQ9NS37 354 aa17.62■□□□□ 0.41
SHMT2-202ENST00000414700 SLC37A4O43826 429 aa17.62■□□□□ 0.41
SHMT2-202ENST00000414700 SREBF1P36956 1147 aa17.62■□□□□ 0.41
SHMT2-202ENST00000414700 C4orf32Q8N8J7 132 aa17.62■□□□□ 0.41
SHMT2-202ENST00000414700 KCNG4Q8TDN1 519 aa17.62■□□□□ 0.41
SHMT2-202ENST00000414700 TAAR1Q96RJ0 339 aa17.62■□□□□ 0.41
SHMT2-202ENST00000414700 CYP39A1Q9NYL5 469 aa17.62■□□□□ 0.41
SHMT2-202ENST00000414700 ZNFX1Q9P2E3 1918 aaKnown RBP17.62■□□□□ 0.41
SHMT2-202ENST00000414700 AOC2O75106 756 aa17.61■□□□□ 0.41
SHMT2-202ENST00000414700 DMTNQ08495 405 aa17.61■□□□□ 0.41
SHMT2-202ENST00000414700 DEFB115Q30KQ5 88 aa17.61■□□□□ 0.41
SHMT2-202ENST00000414700 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
SHMT2-202ENST00000414700 PARK7Q99497 189 aaKnown RBP17.61■□□□□ 0.41
SHMT2-202ENST00000414700 RASSF10A6NK89 507 aa17.6■□□□□ 0.41
SHMT2-202ENST00000414700 ATP2C1P98194 919 aaPredicted RBP17.6■□□□□ 0.41
SHMT2-202ENST00000414700 TKFCQ3LXA3 575 aa17.6■□□□□ 0.41
SHMT2-202ENST00000414700 AXDND1Q5T1B0 1012 aaPredicted RBP17.6■□□□□ 0.41
SHMT2-202ENST00000414700 CHST13Q8NET6 341 aa17.6■□□□□ 0.41
SHMT2-202ENST00000414700 IL31RAQ8NI17 732 aa17.6■□□□□ 0.41
SHMT2-202ENST00000414700 CYP2W1Q8TAV3 490 aa17.6■□□□□ 0.41
SHMT2-202ENST00000414700 UIMC1Q96RL1 719 aa17.6■□□□□ 0.41
SHMT2-202ENST00000414700 EFCC1Q9HA90 598 aa17.6■□□□□ 0.41
SHMT2-202ENST00000414700 FAM86B1E9PN63 330 aa17.6■□□□□ 0.41
SHMT2-202ENST00000414700 PPP6R2O75170 966 aa17.6■□□□□ 0.41
SHMT2-202ENST00000414700 FAM86B2P0C5J1 330 aa17.6■□□□□ 0.41
SHMT2-202ENST00000414700 UBE2HP62256 183 aa17.6■□□□□ 0.41
SHMT2-202ENST00000414700 GJA10Q969M2 543 aa17.6■□□□□ 0.41
SHMT2-202ENST00000414700 CAPNS2Q96L46 248 aa17.6■□□□□ 0.41
SHMT2-202ENST00000414700 FBXO2Q9UK22 296 aaPredicted RBP17.6■□□□□ 0.41
SHMT2-202ENST00000414700 DOCK3Q8IZD9 2030 aa17.6■□□□□ 0.41
SHMT2-202ENST00000414700 TAF1CQ15572 869 aaPredicted RBP17.59■□□□□ 0.41
SHMT2-202ENST00000414700 IL17AQ16552 155 aa17.59■□□□□ 0.41
SHMT2-202ENST00000414700 SPECC1Q5M775 1068 aa17.59■□□□□ 0.41
SHMT2-202ENST00000414700 WDR78Q5VTH9 848 aa17.59■□□□□ 0.41
SHMT2-202ENST00000414700 MCTP2Q6DN12 878 aa17.59■□□□□ 0.41
SHMT2-202ENST00000414700 GPRC5AQ8NFJ5 357 aa17.59■□□□□ 0.41
SHMT2-202ENST00000414700 CPA4Q9UI42 421 aa17.59■□□□□ 0.41
SHMT2-202ENST00000414700 CEP131Q9UPN4 1083 aa17.59■□□□□ 0.41
SHMT2-202ENST00000414700 ASTN1O14525 1302 aa17.59■□□□□ 0.41
SHMT2-202ENST00000414700 NEMFO60524 1076 aa17.59■□□□□ 0.41
SHMT2-202ENST00000414700 EIF2AK2P19525 551 aaKnown RBP17.59■□□□□ 0.41
SHMT2-202ENST00000414700 GCLCP48506 637 aaPredicted RBP17.59■□□□□ 0.41
SHMT2-202ENST00000414700 USP11P51784 963 aa17.59■□□□□ 0.41
SHMT2-202ENST00000414700 CNTN2Q02246 1040 aa17.59■□□□□ 0.41
SHMT2-202ENST00000414700 TEX2Q8IWB9 1127 aa17.59■□□□□ 0.41
SHMT2-202ENST00000414700 ANKRD35Q8N283 1001 aa17.59■□□□□ 0.41
SHMT2-202ENST00000414700 RMDN3Q96TC7 470 aa17.59■□□□□ 0.41
SHMT2-202ENST00000414700 MAP3K20Q9NYL2 800 aaKnown RBP17.59■□□□□ 0.41
SHMT2-202ENST00000414700 RPTORQ8N122 1335 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms