RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 CAPN15O75808 1086 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 UFL1O94874 794 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 PDCP20941 246 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 HOXA10P31260 410 aaPredicted RBP10.53□□□□□ -0.72
SNHG3-201ENST00000413987 TNNT3P45378 269 aaPredicted RBP10.53□□□□□ -0.72
SNHG3-201ENST00000413987 TRPC1P48995 793 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 ZNF165P49910 485 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 GPS2Q13227 327 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 PICALMQ13492 652 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 MLC1Q15049 377 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 HS2ST1Q7LGA3 356 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 NKAIN3Q8N8D7 197 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 FAM84BQ96KN1 310 aaPredicted RBP10.53□□□□□ -0.72
SNHG3-201ENST00000413987 NBPF3Q9H094 633 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 DHX36Q9H2U1 1008 aaKnown RBP10.53□□□□□ -0.72
SNHG3-201ENST00000413987 POLLQ9UGP5 575 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 XPO7Q9UIA9 1087 aaKnown RBP10.53□□□□□ -0.72
SNHG3-201ENST00000413987 SNX14Q9Y5W7 946 aa10.53□□□□□ -0.72
SNHG3-201ENST00000413987 KIF5CO60282 957 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 OATP04181 439 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 NPR1P16066 1061 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 PURAQ00577 322 aaKnown RBP10.52□□□□□ -0.73
SNHG3-201ENST00000413987 RUFY3Q7L099 469 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 KBTBD3Q8NAB2 608 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 SPATA5Q8NB90 893 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 CLSTN2Q9H4D0 955 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 LEMD3Q9Y2U8 911 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 RIMBP2O15034 1052 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 SGSM2O43147 1006 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 IDH1O75874 414 aaKnown RBP10.52□□□□□ -0.73
SNHG3-201ENST00000413987 SKILP12757 684 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 GLULP15104 373 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 RPL17P18621 184 aaKnown RBP10.52□□□□□ -0.73
SNHG3-201ENST00000413987 MZF1P28698 734 aaPredicted RBP10.52□□□□□ -0.73
SNHG3-201ENST00000413987 UBA7P41226 1012 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 PTH1RQ03431 593 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 MFSD4BQ5TF39 518 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 VPS53Q5VIR6 699 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 PRPF40BQ6NWY9 871 aaKnown RBP10.52□□□□□ -0.73
SNHG3-201ENST00000413987 ZNF449Q6P9G9 518 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 PNMA1Q8ND90 353 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 ATXN2LQ8WWM7 1075 aaKnown RBP10.52□□□□□ -0.73
SNHG3-201ENST00000413987 SPAG5Q96R06 1193 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 NUDT12Q9BQG2 462 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 L2HGDHQ9H9P8 463 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 CWC15Q9P013 229 aaKnown RBP10.52□□□□□ -0.73
SNHG3-201ENST00000413987 GGT7Q9UJ14 662 aa10.52□□□□□ -0.73
SNHG3-201ENST00000413987 V9GYY5 206 aaPredicted RBP10.52□□□□□ -0.73
SNHG3-201ENST00000413987 SLX4Q8IY92 1834 aa10.51□□□□□ -0.73
SNHG3-201ENST00000413987 XDHP47989 1333 aa10.51□□□□□ -0.73
SNHG3-201ENST00000413987 H0YIN7 160 aa10.51□□□□□ -0.73
SNHG3-201ENST00000413987 KIF1CO43896 1103 aaKnown RBP10.51□□□□□ -0.73
SNHG3-201ENST00000413987 TPM1P09493 284 aa10.51□□□□□ -0.73
SNHG3-201ENST00000413987 SERPINB3P29508 390 aa10.51□□□□□ -0.73
SNHG3-201ENST00000413987 GSDMDP57764 484 aa10.51□□□□□ -0.73
SNHG3-201ENST00000413987 DACT2Q5SW24 774 aa10.51□□□□□ -0.73
SNHG3-201ENST00000413987 MZT2AQ6P582 158 aa10.51□□□□□ -0.73
SNHG3-201ENST00000413987 CCAR2Q8N163 923 aaKnown RBP10.51□□□□□ -0.73
SNHG3-201ENST00000413987 PXYLP1Q8TE99 480 aa10.51□□□□□ -0.73
SNHG3-201ENST00000413987 MASTLQ96GX5 879 aa10.51□□□□□ -0.73
SNHG3-201ENST00000413987 CRAMP1Q96RY5 1269 aa10.51□□□□□ -0.73
SNHG3-201ENST00000413987 CDH19Q9H159 772 aa10.51□□□□□ -0.73
SNHG3-201ENST00000413987 COMMD8Q9NX08 183 aa10.51□□□□□ -0.73
SNHG3-201ENST00000413987 DCAF16Q9NXF7 216 aa10.51□□□□□ -0.73
SNHG3-201ENST00000413987 TCHHQ07283 1943 aa10.51□□□□□ -0.73
SNHG3-201ENST00000413987 IRS2Q9Y4H2 1338 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 C6orf229H3BNL8 230 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 ZBTB24O43167 697 aaPredicted RBP10.5□□□□□ -0.73
SNHG3-201ENST00000413987 AGR2O95994 175 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 IDEP14735 1019 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 NEK2P51955 445 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 ATP2B2Q01814 1243 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 CPLX2Q6PUV4 134 aaKnown RBP10.5□□□□□ -0.73
SNHG3-201ENST00000413987 TTC6Q86TZ1 520 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 TCEAL8Q8IYN2 117 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 HNRNPLLQ8WVV9 542 aaKnown RBP10.5□□□□□ -0.73
SNHG3-201ENST00000413987 EMID1Q96A84 441 aaPredicted RBP10.5□□□□□ -0.73
SNHG3-201ENST00000413987 SH3KBP1Q96B97 665 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 MKNK1Q9BUB5 465 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 ASPSCR1Q9BZE9 553 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 TM6SF1Q9BZW5 370 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 ANKRD2Q9GZV1 360 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 RASSF4Q9H2L5 321 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 ZNF446Q9NWS9 450 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 DACT1Q9NYF0 836 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 FHOD1Q9Y613 1164 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 VPS37CA5D8V6 355 aaPredicted RBP10.5□□□□□ -0.73
SNHG3-201ENST00000413987 M0R2C6 588 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 BBOX1O75936 387 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 DPEP1P16444 411 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 DNAJB2P25686 324 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 RENBPP51606 427 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 BIRC3Q13489 604 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 CAMK4Q16566 473 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 TMCO3Q6UWJ1 677 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 CAPN12Q6ZSI9 719 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 DAAM2Q86T65 1068 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 CCDC144CPQ8IYA2 1237 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 ARL10Q8N8L6 244 aa10.5□□□□□ -0.73
SNHG3-201ENST00000413987 TBC1D16Q8TBP0 767 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms