RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 LCTP09848 1927 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 TRPM7Q96QT4 1865 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 SPDYE3A6NKU9 549 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 TBX3O15119 743 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 POLR2DO15514 142 aaKnown RBP9.34□□□□□ -0.91
HDAC9-207ENST00000413509 CAVIN2O95810 425 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 XRCC6P12956 609 aaKnown RBP eCLIP9.34□□□□□ -0.91
HDAC9-207ENST00000413509 HOXA13P31271 388 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-207ENST00000413509 GJA5P36382 358 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 PDIA5Q14554 519 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 CALCRLQ16602 461 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 TKFCQ3LXA3 575 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 TREML2Q5T2D2 321 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 KANK3Q6NY19 840 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 PDXDC2PQ6P474 469 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 POTEEQ6S8J3 1075 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.34□□□□□ -0.91
HDAC9-207ENST00000413509 MCF2L2Q86YR7 1114 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 CKAP2LQ8IYA6 745 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 ZNF784Q8NCA9 323 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-207ENST00000413509 ETNPPLQ8TBG4 499 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 TBC1D5Q92609 795 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 MMTAG2Q9BU76 263 aaKnown RBP9.34□□□□□ -0.91
HDAC9-207ENST00000413509 RAVER2Q9HCJ3 691 aaKnown RBP9.34□□□□□ -0.91
HDAC9-207ENST00000413509 HOXC10Q9NYD6 342 aa9.34□□□□□ -0.91
HDAC9-207ENST00000413509 DDX25Q9UHL0 483 aaKnown RBP9.34□□□□□ -0.91
HDAC9-207ENST00000413509 IGLV3-22A0A075B6J6 115 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 TRAF5O00463 557 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 NFIBO00712 420 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 SARSP49591 514 aaKnown RBP9.33□□□□□ -0.92
HDAC9-207ENST00000413509 SPIRE1Q08AE8 756 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 TMEM132BQ14DG7 1078 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 STX1AQ16623 288 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 NAALADL2Q58DX5 795 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 MUM1L1Q5H9M0 696 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 MAP1SQ66K74 1059 aaPredicted RBP9.33□□□□□ -0.92
HDAC9-207ENST00000413509 MB21D1Q8N884 522 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 SYTL5Q8TDW5 730 aaPredicted RBP9.33□□□□□ -0.92
HDAC9-207ENST00000413509 OTUD5Q96G74 571 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 SDF4Q9BRK5 362 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 RRAGCQ9HB90 399 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 DISC1Q9NRI5 854 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 COL20A1Q9P218 1284 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 SERTAD1Q9UHV2 236 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 AGTPBP1Q9UPW5 1226 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 RABGAP1Q9Y3P9 1069 aa9.33□□□□□ -0.92
HDAC9-207ENST00000413509 FAM86B1E9PN63 330 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 CFBP00751 764 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 FAM86B2P0C5J1 330 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 TXLNAP40222 546 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 POSTNQ15063 836 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 UVSSAQ2YD98 709 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 HYIQ5T013 277 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 GPAT2Q6NUI2 795 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 NIPA1Q7RTP0 329 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 SLFN12Q8IYM2 578 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 IQUBQ8NA54 791 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 CNNM3Q8NE01 707 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 FAM200AQ8TCP9 573 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 LRRC15Q8TF66 581 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 OPTNQ96CV9 577 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 PAGE5Q96GU1 130 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 FAM20AQ96MK3 541 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 TRERF1Q96PN7 1200 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 MTRQ99707 1265 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 TEX13BQ9BXU2 312 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 CUEDC2Q9H467 287 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 EHMT1Q9H9B1 1298 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 MAGEF1Q9HAY2 307 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 RNF146Q9NTX7 359 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 HOOK1Q9UJC3 728 aaKnown RBP9.32□□□□□ -0.92
HDAC9-207ENST00000413509 RIPK3Q9Y572 518 aa9.32□□□□□ -0.92
HDAC9-207ENST00000413509 PP2D1A8MPX8 630 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 MEIS1O00470 390 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 FOXN1O15353 648 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 CNMDO75829 334 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 ITGBL1O95965 494 aaPredicted RBP9.31□□□□□ -0.92
HDAC9-207ENST00000413509 BCRP11274 1271 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 ALAS1P13196 640 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 NLRP12P59046 1061 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 FMR1Q06787 632 aaKnown RBP eCLIP9.31□□□□□ -0.92
HDAC9-207ENST00000413509 DPYDQ12882 1025 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 SNAPC2Q13487 334 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 PNOCQ13519 176 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 TTLL12Q14166 644 aaPredicted RBP9.31□□□□□ -0.92
HDAC9-207ENST00000413509 TMEM266Q2M3C6 531 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 ANO6Q4KMQ2 910 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 TMEM119Q4V9L6 283 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 PCNX4Q63HM2 1172 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 SNRNP48Q6IEG0 339 aaKnown RBP9.31□□□□□ -0.92
HDAC9-207ENST00000413509 XRRA1Q6P2D8 792 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 SASS6Q6UVJ0 657 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 FASTKD5Q7L8L6 764 aaKnown RBP9.31□□□□□ -0.92
HDAC9-207ENST00000413509 CABP7Q86V35 215 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 FCHSD1Q86WN1 690 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 RIOX2Q8IUF8 465 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 CPXCR1Q8N123 301 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 SLC5A5Q92911 643 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 DHX58Q96C10 678 aa9.31□□□□□ -0.92
HDAC9-207ENST00000413509 BPIFA3Q9BQP9 254 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms