RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 USH1GQ495M9 461 aa7.38□□□□□ -1.23
USP54-202ENST00000413442 GJC2Q5T442 439 aaPredicted RBP7.38□□□□□ -1.23
USP54-202ENST00000413442 PPP1R18Q6NYC8 613 aa7.38□□□□□ -1.23
USP54-202ENST00000413442 APOA5Q6Q788 366 aa7.38□□□□□ -1.23
USP54-202ENST00000413442 VSIG10LQ86VR7 867 aa7.38□□□□□ -1.23
USP54-202ENST00000413442 SYTL5Q8TDW5 730 aaPredicted RBP7.38□□□□□ -1.23
USP54-202ENST00000413442 TNPO1Q92973 898 aaKnown RBP7.38□□□□□ -1.23
USP54-202ENST00000413442 EMID1Q96A84 441 aaPredicted RBP7.38□□□□□ -1.23
USP54-202ENST00000413442 ZNF274Q96GC6 653 aaPredicted RBP7.38□□□□□ -1.23
USP54-202ENST00000413442 CDHR1Q96JP9 859 aa7.38□□□□□ -1.23
USP54-202ENST00000413442 PIGSQ96S52 555 aa7.38□□□□□ -1.23
USP54-202ENST00000413442 GDF15Q99988 308 aa7.38□□□□□ -1.23
USP54-202ENST00000413442 LBHD1Q9BQE6 289 aaPredicted RBP7.38□□□□□ -1.23
USP54-202ENST00000413442 USP26Q9BXU7 913 aa7.38□□□□□ -1.23
USP54-202ENST00000413442 WDR11Q9BZH6 1224 aa7.38□□□□□ -1.23
USP54-202ENST00000413442 GPHNQ9NQX3 736 aaPredicted RBP7.38□□□□□ -1.23
USP54-202ENST00000413442 STARD7Q9NQZ5 370 aa7.38□□□□□ -1.23
USP54-202ENST00000413442 SYNRGQ9UMZ2 1314 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 A0A0U1RQG5 324 aaPredicted RBP7.37□□□□□ -1.23
USP54-202ENST00000413442 A0A1W2PQ45 241 aaPredicted RBP7.37□□□□□ -1.23
USP54-202ENST00000413442 A0A1W2PQY0 241 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 A6NJR5 290 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 ARVCFO00192 962 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 KIAA0355O15063 1070 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 DYNC1LI2O43237 492 aaPredicted RBP7.37□□□□□ -1.23
USP54-202ENST00000413442 CYTH3O43739 400 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 PARNO95453 639 aaKnown RBP7.37□□□□□ -1.23
USP54-202ENST00000413442 GH1P01241 217 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 ASGR1P07306 291 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 TXNP10599 105 aaKnown RBP7.37□□□□□ -1.23
USP54-202ENST00000413442 TAL1P17542 331 aaPredicted RBP7.37□□□□□ -1.23
USP54-202ENST00000413442 CASTP20810 708 aaKnown RBP7.37□□□□□ -1.23
USP54-202ENST00000413442 CCND2P30279 289 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 ICAM3P32942 547 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 NEDD9Q14511 834 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 FSCN1Q16658 493 aaKnown RBP7.37□□□□□ -1.23
USP54-202ENST00000413442 CPLX2Q6PUV4 134 aaKnown RBP7.37□□□□□ -1.23
USP54-202ENST00000413442 NOL8Q76FK4 1167 aaKnown RBP7.37□□□□□ -1.23
USP54-202ENST00000413442 RUFY3Q7L099 469 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 CHST3Q7LGC8 479 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 TLK2Q86UE8 772 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 SLC43A3Q8NBI5 491 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 SMARCC2Q8TAQ2 1214 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 DIS3LQ8TF46 1054 aaKnown RBP7.37□□□□□ -1.23
USP54-202ENST00000413442 IL17RAQ96F46 866 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 TAAR1Q96RJ0 339 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 SENP7Q9BQF6 1050 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 PRO3102Q9H379 93 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 PSTPIP2Q9H939 334 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 ZSWIM6Q9HCJ5 1215 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 PXMP2Q9NR77 195 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 SNX14Q9Y5W7 946 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 CYP46A1Q9Y6A2 500 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 CENPFP49454 3210 aa7.37□□□□□ -1.23
USP54-202ENST00000413442 NID2Q14112 1375 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 PRPF3O43395 683 aaKnown RBP7.36□□□□□ -1.23
USP54-202ENST00000413442 PGK1P00558 417 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 RPLP2P05387 115 aaKnown RBP7.36□□□□□ -1.23
USP54-202ENST00000413442 SMPD1P17405 629 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 RPS6KB1P23443 525 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 GNA11P29992 359 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 RTP1P59025 263 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 SNAP25P60880 206 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 AKAP17AQ02040 695 aaKnown RBP7.36□□□□□ -1.23
USP54-202ENST00000413442 RTN1Q16799 776 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 LRRC26Q2I0M4 334 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 LRIT3Q3SXY7 679 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 HABP4Q5JVS0 413 aaKnown RBP7.36□□□□□ -1.23
USP54-202ENST00000413442 PCNX4Q63HM2 1172 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 NFRKBQ6P4R8 1299 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 CCDC62Q6P9F0 684 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 SLC30A10Q6XR72 485 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 TMTC3Q6ZXV5 915 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 NLRX1Q86UT6 975 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 RASEFQ8IZ41 740 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 SRBD1Q8N5C6 995 aaKnown RBP7.36□□□□□ -1.23
USP54-202ENST00000413442 BICD2Q8TD16 824 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 VTI1AQ96AJ9 217 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 PDCD2LQ9BRP1 358 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 MTG1Q9BT17 334 aaPredicted RBP7.36□□□□□ -1.23
USP54-202ENST00000413442 KATNAL1Q9BW62 490 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 C22orf23Q9BZE7 217 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 SH3GLB2Q9NR46 395 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 MYH7BA7E2Y1 1941 aa7.36□□□□□ -1.23
USP54-202ENST00000413442 ALPK3Q96L96 1907 aa7.35□□□□□ -1.23
USP54-202ENST00000413442 ASTN1O14525 1302 aa7.35□□□□□ -1.23
USP54-202ENST00000413442 FRMPD4Q14CM0 1322 aa7.35□□□□□ -1.23
USP54-202ENST00000413442 ESYT2A0FGR8 921 aa7.35□□□□□ -1.23
USP54-202ENST00000413442 SPDYE3A6NKU9 549 aa7.35□□□□□ -1.23
USP54-202ENST00000413442 FIBPO43427 364 aa7.35□□□□□ -1.23
USP54-202ENST00000413442 CLTBP09497 229 aa7.35□□□□□ -1.23
USP54-202ENST00000413442 IFNAR1P17181 557 aa7.35□□□□□ -1.23
USP54-202ENST00000413442 AP3B2Q13367 1082 aa7.35□□□□□ -1.23
USP54-202ENST00000413442 ITGA7Q13683 1181 aa7.35□□□□□ -1.23
USP54-202ENST00000413442 PGM5Q15124 567 aa7.35□□□□□ -1.23
USP54-202ENST00000413442 DGKDQ16760 1214 aa7.35□□□□□ -1.23
USP54-202ENST00000413442 ADCK5Q3MIX3 580 aa7.35□□□□□ -1.23
USP54-202ENST00000413442 GALNT17Q6IS24 598 aa7.35□□□□□ -1.23
USP54-202ENST00000413442 Q6ZUG5 572 aa7.35□□□□□ -1.23
USP54-202ENST00000413442 SESTD1Q86VW0 696 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms