RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 TDRD3Q9H7E2 651 aaKnown RBP14.55□□□□□ -0.08
LITAF-203ENST00000413364 SAMSN1Q9NSI8 373 aaKnown RBP14.55□□□□□ -0.08
LITAF-203ENST00000413364 COL2A1P02458 1487 aaPredicted RBP14.55□□□□□ -0.08
LITAF-203ENST00000413364 USP17L10C9JJH3 530 aa14.55□□□□□ -0.08
LITAF-203ENST00000413364 TMEM232C9JQI7 657 aa14.55□□□□□ -0.08
LITAF-203ENST00000413364 ZBTB5O15062 677 aa14.55□□□□□ -0.08
LITAF-203ENST00000413364 RPN1P04843 607 aaKnown RBP14.55□□□□□ -0.08
LITAF-203ENST00000413364 TPM1P09493 284 aa14.55□□□□□ -0.08
LITAF-203ENST00000413364 ERCC3P19447 782 aa14.55□□□□□ -0.08
LITAF-203ENST00000413364 SLC16A2P36021 539 aa14.55□□□□□ -0.08
LITAF-203ENST00000413364 CCDC93Q567U6 631 aa14.55□□□□□ -0.08
LITAF-203ENST00000413364 KLHL10Q6JEL2 608 aa14.55□□□□□ -0.08
LITAF-203ENST00000413364 TMEM179Q6ZVK1 233 aa14.55□□□□□ -0.08
LITAF-203ENST00000413364 KCTD1Q719H9 257 aa14.55□□□□□ -0.08
LITAF-203ENST00000413364 SMYD4Q8IYR2 804 aaPredicted RBP14.55□□□□□ -0.08
LITAF-203ENST00000413364 RTKN2Q8IZC4 609 aa14.55□□□□□ -0.08
LITAF-203ENST00000413364 RASSF8Q8NHQ8 419 aa14.55□□□□□ -0.08
LITAF-203ENST00000413364 MYL1P05976 194 aa14.54□□□□□ -0.08
LITAF-203ENST00000413364 SHROOM1Q2M3G4 852 aaPredicted RBP14.54□□□□□ -0.08
LITAF-203ENST00000413364 HSP90AA4PQ58FG1 418 aa14.54□□□□□ -0.08
LITAF-203ENST00000413364 PRMT6Q96LA8 375 aaPredicted RBP14.54□□□□□ -0.08
LITAF-203ENST00000413364 PDGFDQ9GZP0 370 aaPredicted RBP14.54□□□□□ -0.08
LITAF-203ENST00000413364 CUEDC2Q9H467 287 aa14.54□□□□□ -0.08
LITAF-203ENST00000413364 MAGEF1Q9HAY2 307 aa14.54□□□□□ -0.08
LITAF-203ENST00000413364 NRDCO43847 1150 aa14.54□□□□□ -0.08
LITAF-203ENST00000413364 KCNJ6P48051 423 aa14.54□□□□□ -0.08
LITAF-203ENST00000413364 SEPT2Q15019 361 aa14.54□□□□□ -0.08
LITAF-203ENST00000413364 ZNF658Q5TYW1 1059 aaPredicted RBP14.54□□□□□ -0.08
LITAF-203ENST00000413364 CDKAL1Q5VV42 579 aa14.54□□□□□ -0.08
LITAF-203ENST00000413364 SLFN13Q68D06 897 aa14.54□□□□□ -0.08
LITAF-203ENST00000413364 CABP7Q86V35 215 aa14.54□□□□□ -0.08
LITAF-203ENST00000413364 SIAH1Q8IUQ4 282 aa14.54□□□□□ -0.08
LITAF-203ENST00000413364 PSMD1Q99460 953 aa14.54□□□□□ -0.08
LITAF-203ENST00000413364 KBTBD4Q9NVX7 518 aa14.54□□□□□ -0.08
LITAF-203ENST00000413364 STX17P56962 302 aa14.53□□□□□ -0.08
LITAF-203ENST00000413364 ICA1Q05084 483 aa14.53□□□□□ -0.08
LITAF-203ENST00000413364 ABCB5Q2M3G0 1257 aa14.53□□□□□ -0.08
LITAF-203ENST00000413364 NYAP1Q6ZVC0 841 aa14.53□□□□□ -0.08
LITAF-203ENST00000413364 CUL5Q93034 780 aa14.53□□□□□ -0.08
LITAF-203ENST00000413364 CALR3Q96L12 384 aaKnown RBP14.53□□□□□ -0.08
LITAF-203ENST00000413364 MTMR9Q96QG7 549 aa14.53□□□□□ -0.08
LITAF-203ENST00000413364 FAM107BQ9H098 131 aa14.53□□□□□ -0.08
LITAF-203ENST00000413364 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.53□□□□□ -0.08
LITAF-203ENST00000413364 CTNND2Q9UQB3 1225 aa14.53□□□□□ -0.08
LITAF-203ENST00000413364 SLC1A4P43007 532 aa14.53□□□□□ -0.08
LITAF-203ENST00000413364 CLK2P49760 499 aaKnown RBP14.53□□□□□ -0.08
LITAF-203ENST00000413364 MRPL12P52815 198 aaKnown RBP14.53□□□□□ -0.08
LITAF-203ENST00000413364 IRX1P78414 480 aaPredicted RBP14.53□□□□□ -0.08
LITAF-203ENST00000413364 RSBN1LQ6PCB5 846 aaPredicted RBP14.53□□□□□ -0.08
LITAF-203ENST00000413364 POTEDQ86YR6 584 aa14.53□□□□□ -0.08
LITAF-203ENST00000413364 CCAR2Q8N163 923 aaKnown RBP14.53□□□□□ -0.08
LITAF-203ENST00000413364 RWDD2AQ9UIY3 292 aa14.53□□□□□ -0.08
LITAF-203ENST00000413364 PSME4Q14997 1843 aa14.52□□□□□ -0.08
LITAF-203ENST00000413364 A0A1B0GTH6 734 aa14.52□□□□□ -0.08
LITAF-203ENST00000413364 EDIL3O43854 480 aa14.52□□□□□ -0.08
LITAF-203ENST00000413364 PLCG1P19174 1290 aa14.52□□□□□ -0.08
LITAF-203ENST00000413364 TBX2Q13207 712 aaPredicted RBP14.52□□□□□ -0.08
LITAF-203ENST00000413364 KCNB1Q14721 858 aa14.52□□□□□ -0.08
LITAF-203ENST00000413364 CALCRLQ16602 461 aa14.52□□□□□ -0.08
LITAF-203ENST00000413364 IGSF22Q8N9C0 903 aa14.52□□□□□ -0.08
LITAF-203ENST00000413364 GMCL1P1Q8NEA9 526 aa14.52□□□□□ -0.08
LITAF-203ENST00000413364 USP27XA6NNY8 438 aa14.52□□□□□ -0.09
LITAF-203ENST00000413364 OAS2P29728 719 aaKnown RBP14.52□□□□□ -0.09
LITAF-203ENST00000413364 TECP42680 631 aa14.52□□□□□ -0.09
LITAF-203ENST00000413364 BAG6P46379 1132 aa14.52□□□□□ -0.09
LITAF-203ENST00000413364 TNNI2P48788 182 aa14.52□□□□□ -0.09
LITAF-203ENST00000413364 NR1I3Q14994 352 aa14.52□□□□□ -0.09
LITAF-203ENST00000413364 UBE2SQ16763 222 aa14.52□□□□□ -0.09
LITAF-203ENST00000413364 APTXQ7Z2E3 356 aaKnown RBP14.52□□□□□ -0.09
LITAF-203ENST00000413364 LRRC15Q8TF66 581 aa14.52□□□□□ -0.09
LITAF-203ENST00000413364 GMLQ99445 158 aa14.52□□□□□ -0.09
LITAF-203ENST00000413364 PLIN2Q99541 437 aa14.52□□□□□ -0.09
LITAF-203ENST00000413364 GLT8D2Q9H1C3 349 aa14.52□□□□□ -0.09
LITAF-203ENST00000413364 PSTPIP2Q9H939 334 aa14.52□□□□□ -0.09
LITAF-203ENST00000413364 TMOD2Q9NZR1 351 aa14.52□□□□□ -0.09
LITAF-203ENST00000413364 SPDYE2BA6NHP3 402 aa14.51□□□□□ -0.09
LITAF-203ENST00000413364 GDF11O95390 407 aa14.51□□□□□ -0.09
LITAF-203ENST00000413364 TUBB4AP04350 444 aa14.51□□□□□ -0.09
LITAF-203ENST00000413364 VIL1P09327 827 aaKnown RBP14.51□□□□□ -0.09
LITAF-203ENST00000413364 SPDYE6P0CI01 402 aa14.51□□□□□ -0.09
LITAF-203ENST00000413364 FXR2P51116 673 aaKnown RBP eCLIP14.51□□□□□ -0.09
LITAF-203ENST00000413364 PAK1Q13153 545 aa14.51□□□□□ -0.09
LITAF-203ENST00000413364 QRICH1Q2TAL8 776 aa14.51□□□□□ -0.09
LITAF-203ENST00000413364 SPECC1LQ69YQ0 1117 aa14.51□□□□□ -0.09
LITAF-203ENST00000413364 PPP4R3AQ6IN85 833 aa14.51□□□□□ -0.09
LITAF-203ENST00000413364 REXO1L1PQ8IX06 675 aa14.51□□□□□ -0.09
LITAF-203ENST00000413364 GMCL1Q96IK5 515 aa14.51□□□□□ -0.09
LITAF-203ENST00000413364 MMTAG2Q9BU76 263 aaKnown RBP14.51□□□□□ -0.09
LITAF-203ENST00000413364 SLC37A4O43826 429 aa14.5□□□□□ -0.09
LITAF-203ENST00000413364 KLRC4O43908 158 aa14.5□□□□□ -0.09
LITAF-203ENST00000413364 RAD21O60216 631 aa14.5□□□□□ -0.09
LITAF-203ENST00000413364 TDP2O95551 362 aa14.5□□□□□ -0.09
LITAF-203ENST00000413364 DPEP1P16444 411 aa14.5□□□□□ -0.09
LITAF-203ENST00000413364 KCNA3P22001 575 aa14.5□□□□□ -0.09
LITAF-203ENST00000413364 TXKP42681 527 aa14.5□□□□□ -0.09
LITAF-203ENST00000413364 LMAN1P49257 510 aa14.5□□□□□ -0.09
LITAF-203ENST00000413364 SF3B2Q13435 895 aaKnown RBP14.5□□□□□ -0.09
LITAF-203ENST00000413364 RBM26Q5T8P6 1007 aaKnown RBP14.5□□□□□ -0.09
LITAF-203ENST00000413364 LARGE2Q8N3Y3 721 aa14.5□□□□□ -0.09
LITAF-203ENST00000413364 NELFBQ8WX92 580 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms