RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 PTPREP23469 700 aa29.58■■■□□ 2.33
RHBDD3-203ENST00000413137 ADORA2AP29274 412 aa29.58■■■□□ 2.33
RHBDD3-203ENST00000413137 ARHGAP4P98171 946 aa29.58■■■□□ 2.33
RHBDD3-203ENST00000413137 CEBPZQ03701 1054 aaKnown RBP29.58■■■□□ 2.33
RHBDD3-203ENST00000413137 FGD4Q96M96 766 aa29.58■■■□□ 2.33
RHBDD3-203ENST00000413137 MAF1Q9H063 256 aa29.58■■■□□ 2.33
RHBDD3-203ENST00000413137 PXMP2Q9NR77 195 aa29.58■■■□□ 2.33
RHBDD3-203ENST00000413137 CLIC4Q9Y696 253 aa29.58■■■□□ 2.33
RHBDD3-203ENST00000413137 POTEB2H3BUK9 544 aa29.57■■■□□ 2.32
RHBDD3-203ENST00000413137 COBLO75128 1261 aa29.57■■■□□ 2.32
RHBDD3-203ENST00000413137 RILPL1Q5EBL4 403 aa29.57■■■□□ 2.32
RHBDD3-203ENST00000413137 MCTP2Q6DN12 878 aa29.57■■■□□ 2.32
RHBDD3-203ENST00000413137 ATP6V1DQ9Y5K8 247 aa29.57■■■□□ 2.32
RHBDD3-203ENST00000413137 LCTP09848 1927 aa29.57■■■□□ 2.32
RHBDD3-203ENST00000413137 GRB14Q14449 540 aa29.56■■■□□ 2.32
RHBDD3-203ENST00000413137 LETM2Q2VYF4 491 aa29.56■■■□□ 2.32
RHBDD3-203ENST00000413137 TTC38Q5R3I4 469 aa29.56■■■□□ 2.32
RHBDD3-203ENST00000413137 NEK8Q86SG6 692 aa29.56■■■□□ 2.32
RHBDD3-203ENST00000413137 TSKSQ9UJT2 592 aa29.56■■■□□ 2.32
RHBDD3-203ENST00000413137 CNPY2Q9Y2B0 182 aa29.56■■■□□ 2.32
RHBDD3-203ENST00000413137 IVNS1ABPQ9Y6Y0 642 aa29.56■■■□□ 2.32
RHBDD3-203ENST00000413137 FRMPD4Q14CM0 1322 aa29.56■■■□□ 2.32
RHBDD3-203ENST00000413137 STRNO43815 780 aa29.56■■■□□ 2.32
RHBDD3-203ENST00000413137 LACTBP83111 547 aaPredicted RBP29.56■■■□□ 2.32
RHBDD3-203ENST00000413137 ZNF174Q15697 407 aa29.56■■■□□ 2.32
RHBDD3-203ENST00000413137 ABRAQ8N0Z2 381 aa29.56■■■□□ 2.32
RHBDD3-203ENST00000413137 NOL7Q9UMY1 257 aaKnown RBP29.56■■■□□ 2.32
RHBDD3-203ENST00000413137 TDP2O95551 362 aa29.55■■■□□ 2.32
RHBDD3-203ENST00000413137 ARHGEF16Q5VV41 709 aa29.55■■■□□ 2.32
RHBDD3-203ENST00000413137 PDCD2LQ9BRP1 358 aa29.55■■■□□ 2.32
RHBDD3-203ENST00000413137 BAG4O95429 457 aaKnown RBP29.54■■■□□ 2.32
RHBDD3-203ENST00000413137 NCLP19338 710 aaKnown RBP29.54■■■□□ 2.32
RHBDD3-203ENST00000413137 TRAPPC10P48553 1259 aa29.54■■■□□ 2.32
RHBDD3-203ENST00000413137 SP3Q02447 781 aa29.54■■■□□ 2.32
RHBDD3-203ENST00000413137 MAP2K1Q02750 393 aaPredicted RBP29.54■■■□□ 2.32
RHBDD3-203ENST00000413137 PGM5Q15124 567 aa29.54■■■□□ 2.32
RHBDD3-203ENST00000413137 MORN1Q5T089 497 aa29.54■■■□□ 2.32
RHBDD3-203ENST00000413137 TRIM47Q96LD4 638 aa29.54■■■□□ 2.32
RHBDD3-203ENST00000413137 GDPD2Q9HCC8 539 aa29.54■■■□□ 2.32
RHBDD3-203ENST00000413137 SAGE1Q9NXZ1 904 aa29.54■■■□□ 2.32
RHBDD3-203ENST00000413137 MYH7BA7E2Y1 1941 aa29.53■■■□□ 2.32
RHBDD3-203ENST00000413137 PSMC4P43686 418 aa29.53■■■□□ 2.32
RHBDD3-203ENST00000413137 SF3A1Q15459 793 aaKnown RBP29.53■■■□□ 2.32
RHBDD3-203ENST00000413137 CYP2W1Q8TAV3 490 aa29.53■■■□□ 2.32
RHBDD3-203ENST00000413137 NSUN6Q8TEA1 469 aaKnown RBP29.53■■■□□ 2.32
RHBDD3-203ENST00000413137 ZNF396Q96N95 335 aaPredicted RBP29.53■■■□□ 2.32
RHBDD3-203ENST00000413137 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.53■■■□□ 2.32
RHBDD3-203ENST00000413137 MRVI1Q9Y6F6 885 aa29.53■■■□□ 2.32
RHBDD3-203ENST00000413137 ZSWIM8A7E2V4 1837 aa29.53■■■□□ 2.32
RHBDD3-203ENST00000413137 PLXNB2O15031 1838 aa29.53■■■□□ 2.32
RHBDD3-203ENST00000413137 SLC15A5A6NIM6 579 aa29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 GPR25O00155 361 aa29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 CCNT1O60563 726 aaKnown RBP29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 CYP3A4P08684 503 aa29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 MCM7P33993 719 aa29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 ALDH5A1P51649 535 aaPredicted RBP29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 USP11P51784 963 aa29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 ZNF792Q3KQV3 632 aa29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 ANO1Q5XXA6 986 aa29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 GJD2Q9UKL4 321 aa29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 FAM86B1E9PN63 330 aa29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 TNPO2O14787 897 aaKnown RBP29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 FAM86B2P0C5J1 330 aa29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 MRPS9P82933 396 aaKnown RBP29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 DNERQ8NFT8 737 aa29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 EHMT1Q9H9B1 1298 aa29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 WBP1LQ9NX94 342 aa29.52■■■□□ 2.32
RHBDD3-203ENST00000413137 SLC37A4O43826 429 aa29.51■■■□□ 2.31
RHBDD3-203ENST00000413137 NR3C2P08235 984 aa29.51■■■□□ 2.31
RHBDD3-203ENST00000413137 MYCLP12524 364 aaPredicted RBP29.51■■■□□ 2.31
RHBDD3-203ENST00000413137 PTPAQ15257 358 aa29.51■■■□□ 2.31
RHBDD3-203ENST00000413137 RTEL1Q9NZ71 1219 aa29.51■■■□□ 2.31
RHBDD3-203ENST00000413137 DOCK3Q8IZD9 2030 aa29.51■■■□□ 2.31
RHBDD3-203ENST00000413137 ZNFX1Q9P2E3 1918 aaKnown RBP29.5■■■□□ 2.31
RHBDD3-203ENST00000413137 MYH15Q9Y2K3 1946 aa29.5■■■□□ 2.31
RHBDD3-203ENST00000413137 PCNX4Q63HM2 1172 aa29.5■■■□□ 2.31
RHBDD3-203ENST00000413137 CLEC17AQ6ZS10 378 aa29.5■■■□□ 2.31
RHBDD3-203ENST00000413137 NPLOC4Q8TAT6 608 aa29.5■■■□□ 2.31
RHBDD3-203ENST00000413137 USP6NLQ92738 828 aa29.5■■■□□ 2.31
RHBDD3-203ENST00000413137 POLR3EQ9NVU0 708 aa29.5■■■□□ 2.31
RHBDD3-203ENST00000413137 FIBPO43427 364 aa29.49■■■□□ 2.31
RHBDD3-203ENST00000413137 CIITAP33076 1130 aa29.49■■■□□ 2.31
RHBDD3-203ENST00000413137 NASPP49321 788 aaPredicted RBP29.49■■■□□ 2.31
RHBDD3-203ENST00000413137 FCGRTP55899 365 aa29.49■■■□□ 2.31
RHBDD3-203ENST00000413137 KRT85P78386 507 aa29.49■■■□□ 2.31
RHBDD3-203ENST00000413137 DPP9Q86TI2 863 aa29.49■■■□□ 2.31
RHBDD3-203ENST00000413137 VSIG10LQ86VR7 867 aa29.49■■■□□ 2.31
RHBDD3-203ENST00000413137 TMEM60Q9H2L4 133 aa29.49■■■□□ 2.31
RHBDD3-203ENST00000413137 CYP3A7-CYP3A51PA0A087WV96 503 aa29.48■■■□□ 2.31
RHBDD3-203ENST00000413137 CYP3A7P24462 503 aa29.48■■■□□ 2.31
RHBDD3-203ENST00000413137 MAP2K5Q13163 448 aa29.48■■■□□ 2.31
RHBDD3-203ENST00000413137 C4orf32Q8N8J7 132 aa29.48■■■□□ 2.31
RHBDD3-203ENST00000413137 CD99L2Q8TCZ2 262 aa29.48■■■□□ 2.31
RHBDD3-203ENST00000413137 UIMC1Q96RL1 719 aa29.48■■■□□ 2.31
RHBDD3-203ENST00000413137 ADD3Q9UEY8 706 aaKnown RBP29.48■■■□□ 2.31
RHBDD3-203ENST00000413137 ITGB5P18084 799 aa29.47■■■□□ 2.31
RHBDD3-203ENST00000413137 ATL3Q6DD88 541 aa29.47■■■□□ 2.31
RHBDD3-203ENST00000413137 PPP4R3AQ6IN85 833 aa29.47■■■□□ 2.31
RHBDD3-203ENST00000413137 POTEDQ86YR6 584 aa29.47■■■□□ 2.31
RHBDD3-203ENST00000413137 LINC00301Q8NCQ3 95 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms