RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 POLLQ9UGP5 575 aa15.4■□□□□ 0.06
NUB1-201ENST00000413040 CCDC88AQ3V6T2 1871 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 EIF3JO75822 258 aaKnown RBP15.39■□□□□ 0.05
NUB1-201ENST00000413040 RHBDL3P58872 404 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 FAM193AP78312 1265 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 KCTD1Q719H9 257 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 CACNA2D4Q7Z3S7 1137 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 NUP58Q9BVL2 599 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 KANSL2Q9H9L4 492 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 NLRC4Q9NPP4 1024 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 ADAM21Q9UKJ8 722 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 IRS2Q9Y4H2 1338 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 HNRNPH2P55795 449 aaKnown RBP15.39■□□□□ 0.05
NUB1-201ENST00000413040 GRB10Q13322 594 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 TDRD12Q587J7 1177 aaKnown RBP15.39■□□□□ 0.05
NUB1-201ENST00000413040 RRAGAQ7L523 313 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 SLF2Q8IX21 1173 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 CCDC155Q8N6L0 562 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 C7orf25Q9BPX7 421 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 RAB34Q9BZG1 259 aa15.39■□□□□ 0.05
NUB1-201ENST00000413040 TOM1O60784 492 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 CASP8Q14790 479 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 VPS72Q15906 364 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 DOK7Q18PE1 504 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 SKIDA1Q1XH10 827 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 NELFCDQ8IXH7 590 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 GSPT2Q8IYD1 628 aaKnown RBP15.38■□□□□ 0.05
NUB1-201ENST00000413040 MSANTD4Q8NCY6 345 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 DDX12PQ92771 950 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 GBP3Q9H0R5 595 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 NDST4Q9H3R1 872 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 DAGLAQ9Y4D2 1042 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 LAMB2P55268 1798 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 RASSF10A6NK89 507 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 FAM196BA6NMK8 535 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 EPHB6O15197 1021 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 AMPD2Q01433 879 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 KCNK18Q7Z418 384 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 TBC1D16Q8TBP0 767 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 RBM17Q96I25 401 aaKnown RBP15.38■□□□□ 0.05
NUB1-201ENST00000413040 CRACR2AQ9BSW2 395 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 BLOC1S4Q9NUP1 217 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 MTMR4Q9NYA4 1195 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 L1RE1Q9UN81 338 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 FAN1Q9Y2M0 1017 aa15.38■□□□□ 0.05
NUB1-201ENST00000413040 TRAF5O00463 557 aa15.37■□□□□ 0.05
NUB1-201ENST00000413040 CXCR5P32302 372 aa15.37■□□□□ 0.05
NUB1-201ENST00000413040 ARID5AQ03989 594 aa15.37■□□□□ 0.05
NUB1-201ENST00000413040 CCDC40Q4G0X9 1142 aa15.37■□□□□ 0.05
NUB1-201ENST00000413040 TRIM34Q9BYJ4 488 aa15.37■□□□□ 0.05
NUB1-201ENST00000413040 IFIH1Q9BYX4 1025 aaKnown RBP15.37■□□□□ 0.05
NUB1-201ENST00000413040 MAGEF1Q9HAY2 307 aa15.37■□□□□ 0.05
NUB1-201ENST00000413040 USO1O60763 962 aaKnown RBP15.37■□□□□ 0.05
NUB1-201ENST00000413040 TCP10Q12799 353 aa15.37■□□□□ 0.05
NUB1-201ENST00000413040 MIIPQ5JXC2 388 aa15.37■□□□□ 0.05
NUB1-201ENST00000413040 SECISBP2LQ93073 1101 aaKnown RBP15.37■□□□□ 0.05
NUB1-201ENST00000413040 PNMA5Q96PV4 448 aa15.37■□□□□ 0.05
NUB1-201ENST00000413040 MLXIPQ9HAP2 919 aa15.37■□□□□ 0.05
NUB1-201ENST00000413040 LRRC4BQ9NT99 713 aa15.37■□□□□ 0.05
NUB1-201ENST00000413040 CALCOCO1Q9P1Z2 691 aa15.37■□□□□ 0.05
NUB1-201ENST00000413040 ROBO3Q96MS0 1386 aa15.37■□□□□ 0.05
NUB1-201ENST00000413040 UBAP1LF5GYI3 381 aa15.36■□□□□ 0.05
NUB1-201ENST00000413040 TRAPPC11Q7Z392 1133 aa15.36■□□□□ 0.05
NUB1-201ENST00000413040 USP40Q9NVE5 1235 aa15.36■□□□□ 0.05
NUB1-201ENST00000413040 RAB21Q9UL25 225 aa15.36■□□□□ 0.05
NUB1-201ENST00000413040 KRT18P05783 430 aaKnown RBP15.36■□□□□ 0.05
NUB1-201ENST00000413040 EIF4A3P38919 411 aaKnown RBP15.36■□□□□ 0.05
NUB1-201ENST00000413040 CACNB3P54284 484 aa15.36■□□□□ 0.05
NUB1-201ENST00000413040 C2orf54Q08AI8 447 aa15.36■□□□□ 0.05
NUB1-201ENST00000413040 VWA3BQ502W6 1294 aa15.36■□□□□ 0.05
NUB1-201ENST00000413040 ZSCAN29Q8IWY8 852 aaPredicted RBP15.36■□□□□ 0.05
NUB1-201ENST00000413040 EHBP1Q8NDI1 1231 aa15.36■□□□□ 0.05
NUB1-201ENST00000413040 SNED1Q8TER0 1413 aa15.36■□□□□ 0.05
NUB1-201ENST00000413040 PSMD14O00487 310 aa15.36■□□□□ 0.05
NUB1-201ENST00000413040 MAP2K7O14733 419 aa15.36■□□□□ 0.05
NUB1-201ENST00000413040 MOCS3O95396 460 aa15.36■□□□□ 0.05
NUB1-201ENST00000413040 UNC13DQ70J99 1090 aa15.36■□□□□ 0.05
NUB1-201ENST00000413040 ADGRF4Q8IZF3 695 aa15.36■□□□□ 0.05
NUB1-201ENST00000413040 ZC3H12CQ9C0D7 883 aaKnown RBP15.36■□□□□ 0.05
NUB1-201ENST00000413040 DDX4Q9NQI0 724 aaKnown RBP15.36■□□□□ 0.05
NUB1-201ENST00000413040 DDX25Q9UHL0 483 aaKnown RBP15.36■□□□□ 0.05
NUB1-201ENST00000413040 USP17L15C9J2P7 530 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 USP17L10C9JJH3 530 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 USP17L13C9JLJ4 530 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 USP17L11C9JVI0 530 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 USP17L18D6R9N7 530 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 USP17L22D6RA61 530 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 USP17L17D6RBQ6 530 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 USP17L19D6RCP7 530 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 USP17L20D6RJB6 530 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 USP17L24Q0WX57 530 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 IKQ13123 557 aaPredicted RBP15.35■□□□□ 0.05
NUB1-201ENST00000413040 USP17L6PQ6QN14 398 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 RETREG2Q8NC44 543 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 TBC1D22AQ8WUA7 517 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 TSG101Q99816 390 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 PLEKHA4Q9H4M7 779 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 SERPINB13Q9UIV8 391 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 PCDHA12Q9UN75 941 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 GOLGB1Q14789 3259 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms