RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 SLC35F6Q8N357 371 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 SNX29Q8TEQ0 813 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 MTMR8Q96EF0 704 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 NOC4LQ9BVI4 516 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 GLT8D2Q9H1C3 349 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 SLC39A2Q9NP94 309 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 ZNHIT6Q9NWK9 470 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 ATP8B1O43520 1251 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 PPP1R11O60927 126 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 ZRANB2O95218 330 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 FGFR1OPO95684 399 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 GABPB1Q06547 395 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 UBE2SQ16763 222 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 ZSCAN29Q8IWY8 852 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 RAD54LQ92698 747 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 IQCDQ96DY2 449 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 ZDHHC15Q96MV8 337 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 NAPGQ99747 312 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 MRIQ9BWK5 157 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 DHX36Q9H2U1 1008 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 PSTPIP2Q9H939 334 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 DDX25Q9UHL0 483 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 POTEMA6NI47 508 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 USP17L10C9JJH3 530 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 MARCH6O60337 910 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 SLC16A2P36021 539 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 CHMP4BP1P59074 171 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 KRT83P78385 493 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 NFIAQ12857 509 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 PSMD2Q13200 908 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 FKBP15Q5T1M5 1219 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 KCTD1Q719H9 257 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 GUF1Q8N442 669 aaKnown RBP12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 SEMA6BQ9H3T3 888 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 HAUS4Q9H6D7 363 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 FHOD1Q9Y613 1164 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 ZBED6P86452 979 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 MEA1Q16626 185 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 FIGNQ5HY92 759 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 WDR59Q6PJI9 974 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 COL23A1Q86Y22 540 aaPredicted RBP12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 EEF2KMTQ96G04 330 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 PCMTD1Q96MG8 357 aaPredicted RBP12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 ERGIC2Q96RQ1 377 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 TTYH3Q9C0H2 523 aa12.81□□□□□ -0.36
TRAFD1-202ENST00000412615 PNMA6AP0CW24 399 aaPredicted RBP12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 CYLC1P35663 651 aaPredicted RBP12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 TMEM119Q4V9L6 283 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 DYMQ7RTS9 669 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 HPS3Q969F9 1004 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 MKL1Q969V6 931 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 PCDHA12Q9UN75 941 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 ANKRD31Q8N7Z5 1873 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 MYH8P13535 1937 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 A0A1W2PQJ5 194 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 ABL1P00519 1130 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 LRRC63Q05C16 580 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 SEPT2Q15019 361 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 MIIPQ5JXC2 388 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 FLAD1Q8NFF5 587 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 NUDT12Q9BQG2 462 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 PARD6BQ9BYG5 372 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 EPC1Q9H2F5 836 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 KANSL2Q9H9L4 492 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 AGPAT5Q9NUQ2 364 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 PI4KBQ9UBF8 816 aa12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 REXO2Q9Y3B8 237 aaKnown RBP12.8□□□□□ -0.36
TRAFD1-202ENST00000412615 IPO7O95373 1038 aaKnown RBP12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 IDEP14735 1019 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 FKBP1AP62942 108 aaKnown RBP12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 HDLBPQ00341 1268 aaKnown RBP12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 WHAMMP3Q1A5X7 153 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 ZNF662Q6ZS27 426 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 CCDC170Q8IYT3 715 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 DCAF4Q8WV16 495 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 DDX12PQ92771 950 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 HAS1Q92839 578 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 BMP2KQ9NSY1 1161 aaPredicted RBP12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 NYAP2Q9P242 653 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 ATF5Q9Y2D1 282 aaPredicted RBP12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 ABCB11O95342 1321 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 RASSF10A6NK89 507 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 POTEB2H3BUK9 544 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 MMP10P09238 476 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 SLC1A4P43007 532 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 CERKLQ49MI3 558 aaPredicted RBP12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 STRIP1Q5VSL9 837 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 FOXR2Q6PJQ5 311 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 ZFPM1Q8IX07 1006 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 ZNF622Q969S3 477 aaKnown RBP eCLIP12.79□□□□□ -0.362e-7■■□□□ 11.8
TRAFD1-202ENST00000412615 AKT1S1Q96B36 256 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 TRIM34Q9BYJ4 488 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 NT5C3AQ9H0P0 336 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 DBNDD1Q9H9R9 158 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 ARFGAP3Q9NP61 516 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 PUF60Q9UHX1 559 aaKnown RBP12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 GUCA1BQ9UMX6 200 aa12.79□□□□□ -0.36
TRAFD1-202ENST00000412615 EEF2P13639 858 aaKnown RBP12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 USP11P51784 963 aa12.78□□□□□ -0.36
TRAFD1-202ENST00000412615 VWA3BQ502W6 1294 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms