RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 NRBP1Q9UHY1 535 aa13.81□□□□□ -0.2
NEDD1-202ENST00000411739 ADAMTS3O15072 1205 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 MSCO60682 206 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 SMPD1P17405 629 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 RCAN1P53805 252 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 NAPAP54920 295 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 TNFAIP2Q03169 654 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 SCRN1Q12765 414 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 SEPT14Q6ZU15 432 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 DNERQ8NFT8 737 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 MORC4Q8TE76 937 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 MEIS2O14770 477 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 LRRC41Q15345 812 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 PKN1Q16512 942 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 SMARCC2Q8TAQ2 1214 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 IL17RAQ96F46 866 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 PGBD1Q96JS3 809 aa13.8□□□□□ -0.2
NEDD1-202ENST00000411739 STXBP3O00186 592 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 NR3C2P08235 984 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 EDNRBP24530 442 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 BEX3Q00994 111 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 TRAF1Q13077 416 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 ME3Q16798 604 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 COPS5Q92905 334 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 SENP6Q9GZR1 1112 aaPredicted RBP13.79□□□□□ -0.2
NEDD1-202ENST00000411739 SLKQ9H2G2 1235 aaPredicted RBP13.79□□□□□ -0.2
NEDD1-202ENST00000411739 SYNRGQ9UMZ2 1314 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 CPLX1O14810 134 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 DYNC1LI2O43237 492 aaPredicted RBP13.79□□□□□ -0.2
NEDD1-202ENST00000411739 SORBS3O60504 671 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 ATN1P54259 1190 aaPredicted RBP13.79□□□□□ -0.2
NEDD1-202ENST00000411739 PPP2R5BQ15173 497 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 NECAB2Q7Z6G3 386 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 PDCD2LQ9BRP1 358 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 WDR11Q9BZH6 1224 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 C11orf49Q9H6J7 331 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 VTA1Q9NP79 307 aa13.79□□□□□ -0.2
NEDD1-202ENST00000411739 NID2Q14112 1375 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 PRPF3O43395 683 aaKnown RBP13.78□□□□□ -0.2
NEDD1-202ENST00000411739 ARIH2O95376 493 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 C6orf222P0C671 652 aaPredicted RBP13.78□□□□□ -0.2
NEDD1-202ENST00000411739 SCG2P13521 617 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 GHRHRQ02643 423 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 PGM5Q15124 567 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 PFKFB3Q16875 520 aaPredicted RBP13.78□□□□□ -0.2
NEDD1-202ENST00000411739 DPF3Q92784 378 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 CUL5Q93034 780 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 AIFM3Q96NN9 605 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 TMEM260Q9NX78 707 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 RTEL1Q9NZ71 1219 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 SMCO2A6NFE2 343 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 IFNAR1P17181 557 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 AKAP17AQ02040 695 aaKnown RBP13.78□□□□□ -0.2
NEDD1-202ENST00000411739 STXBP2Q15833 593 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 ARRDC4Q8NCT1 418 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 ALDH8A1Q9H2A2 487 aaPredicted RBP13.78□□□□□ -0.2
NEDD1-202ENST00000411739 BARHL2Q9NY43 387 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 DNAH12Q6ZR08 3092 aa13.78□□□□□ -0.2
NEDD1-202ENST00000411739 FRMPD3Q5JV73 1810 aa13.77□□□□□ -0.2
NEDD1-202ENST00000411739 PFKFB2O60825 505 aa13.77□□□□□ -0.21
NEDD1-202ENST00000411739 ADAMTS4O75173 837 aa13.77□□□□□ -0.21
NEDD1-202ENST00000411739 DUSP11O75319 330 aaKnown RBP13.77□□□□□ -0.21
NEDD1-202ENST00000411739 LY6KQ17RY6 165 aa13.77□□□□□ -0.21
NEDD1-202ENST00000411739 ANKLE1Q8NAG6 615 aa13.77□□□□□ -0.21
NEDD1-202ENST00000411739 VPS54Q9P1Q0 977 aa13.77□□□□□ -0.21
NEDD1-202ENST00000411739 RBM25P49756 843 aaKnown RBP13.76□□□□□ -0.21
NEDD1-202ENST00000411739 SSRP1Q08945 709 aaKnown RBP13.76□□□□□ -0.21
NEDD1-202ENST00000411739 ANKRD1Q15327 319 aa13.76□□□□□ -0.21
NEDD1-202ENST00000411739 IQSEC1Q6DN90 963 aa13.76□□□□□ -0.21
NEDD1-202ENST00000411739 TLK2Q86UE8 772 aa13.76□□□□□ -0.21
NEDD1-202ENST00000411739 MPHOSPH6Q99547 160 aaKnown RBP13.76□□□□□ -0.21
NEDD1-202ENST00000411739 GNEQ9Y223 722 aaKnown RBP13.76□□□□□ -0.21
NEDD1-202ENST00000411739 PDE4DIPQ5VU43 2346 aa13.76□□□□□ -0.21
NEDD1-202ENST00000411739 LRRC37A2A6NM11 1700 aa13.76□□□□□ -0.21
NEDD1-202ENST00000411739 KBTBD13C9JR72 458 aa13.76□□□□□ -0.21
NEDD1-202ENST00000411739 DNM1LO00429 736 aa13.76□□□□□ -0.21
NEDD1-202ENST00000411739 RGS20O76081 388 aa13.76□□□□□ -0.21
NEDD1-202ENST00000411739 CTDNEP1O95476 244 aa13.76□□□□□ -0.21
NEDD1-202ENST00000411739 TXNP10599 105 aaKnown RBP13.76□□□□□ -0.21
NEDD1-202ENST00000411739 KCNA10Q16322 511 aa13.76□□□□□ -0.21
NEDD1-202ENST00000411739 GNASQ5JWF2 1037 aa13.76□□□□□ -0.21
NEDD1-202ENST00000411739 RNF180Q86T96 592 aa13.76□□□□□ -0.21
NEDD1-202ENST00000411739 VSIG10LQ86VR7 867 aa13.76□□□□□ -0.21
NEDD1-202ENST00000411739 IWS1Q96ST2 819 aa13.76□□□□□ -0.21
NEDD1-202ENST00000411739 UPF2Q9HAU5 1272 aaKnown RBP13.76□□□□□ -0.21
NEDD1-202ENST00000411739 MAP3K20Q9NYL2 800 aaKnown RBP13.76□□□□□ -0.21
NEDD1-202ENST00000411739 B4DLN1 442 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 CTAGE5O15320 804 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 COL6A1P12109 1028 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 ADCY7P51828 1080 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 MRPL12P52815 198 aaKnown RBP13.75□□□□□ -0.21
NEDD1-202ENST00000411739 MRPS9P82933 396 aaKnown RBP13.75□□□□□ -0.21
NEDD1-202ENST00000411739 JAKMIP3Q5VZ66 844 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 RASGRP4Q8TDF6 673 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 RNF26Q9BY78 433 aaPredicted RBP13.75□□□□□ -0.21
NEDD1-202ENST00000411739 BACH2Q9BYV9 841 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 RIC8AQ9NPQ8 531 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 GJB4Q9NTQ9 266 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 PCDHA6Q9UN73 950 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 PCDHA8Q9Y5H6 950 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms