RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 CHMP4BP1P59074 171 aa19.62■□□□□ 0.73
MRPL55-220ENST00000411464 PTPN11Q06124 597 aaPredicted RBP19.62■□□□□ 0.73
MRPL55-220ENST00000411464 BFSP2Q13515 415 aa19.62■□□□□ 0.73
MRPL55-220ENST00000411464 SKIV2LQ15477 1246 aaKnown RBP19.62■□□□□ 0.73
MRPL55-220ENST00000411464 AAK1Q2M2I8 961 aa19.62■□□□□ 0.73
MRPL55-220ENST00000411464 PHOSPHO2Q8TCD6 241 aa19.62■□□□□ 0.73
MRPL55-220ENST00000411464 KIF28PB7ZC32 967 aa19.61■□□□□ 0.73
MRPL55-220ENST00000411464 IQCF3P0C7M6 154 aa19.61■□□□□ 0.73
MRPL55-220ENST00000411464 GPATCH4Q5T3I0 446 aaKnown RBP19.61■□□□□ 0.73
MRPL55-220ENST00000411464 RGS22Q8NE09 1264 aa19.61■□□□□ 0.73
MRPL55-220ENST00000411464 PPP1R13LQ8WUF5 828 aa19.61■□□□□ 0.73
MRPL55-220ENST00000411464 COPS5Q92905 334 aa19.61■□□□□ 0.73
MRPL55-220ENST00000411464 SLC9A7Q96T83 725 aa19.61■□□□□ 0.73
MRPL55-220ENST00000411464 ZMYM6O95789 1325 aa19.6■□□□□ 0.73
MRPL55-220ENST00000411464 SNHG28P0DPA3 235 aa19.6■□□□□ 0.73
MRPL55-220ENST00000411464 USH1GQ495M9 461 aa19.6■□□□□ 0.73
MRPL55-220ENST00000411464 RNF41Q9H4P4 317 aaPredicted RBP19.6■□□□□ 0.73
MRPL55-220ENST00000411464 MUC3AQ02505 3323 aa19.6■□□□□ 0.73
MRPL55-220ENST00000411464 TRIM6-TRIM34B2RNG4 842 aa19.59■□□□□ 0.73
MRPL55-220ENST00000411464 RFXAPO00287 272 aa19.59■□□□□ 0.73
MRPL55-220ENST00000411464 GOLGA8HP0CJ92 632 aa19.59■□□□□ 0.73
MRPL55-220ENST00000411464 NMIQ13287 307 aaPredicted RBP19.59■□□□□ 0.73
MRPL55-220ENST00000411464 ZNF589Q86UQ0 364 aaPredicted RBP19.59■□□□□ 0.73
MRPL55-220ENST00000411464 ESR2Q92731 530 aa19.59■□□□□ 0.73
MRPL55-220ENST00000411464 CERS4Q9HA82 394 aa19.59■□□□□ 0.73
MRPL55-220ENST00000411464 CCDC171Q6TFL3 1326 aa19.58■□□□□ 0.73
MRPL55-220ENST00000411464 BMP1P13497 986 aa19.58■□□□□ 0.72
MRPL55-220ENST00000411464 POU3F3P20264 500 aaPredicted RBP19.58■□□□□ 0.72
MRPL55-220ENST00000411464 MFAP1P55081 439 aaKnown RBP19.58■□□□□ 0.72
MRPL55-220ENST00000411464 TFF2Q03403 129 aa19.58■□□□□ 0.72
MRPL55-220ENST00000411464 PTGISQ16647 500 aa19.58■□□□□ 0.72
MRPL55-220ENST00000411464 DGKHQ86XP1 1220 aa19.58■□□□□ 0.72
MRPL55-220ENST00000411464 HERC6Q8IVU3 1022 aa19.58■□□□□ 0.72
MRPL55-220ENST00000411464 CCDC155Q8N6L0 562 aa19.58■□□□□ 0.72
MRPL55-220ENST00000411464 UBA5Q9GZZ9 404 aa19.58■□□□□ 0.72
MRPL55-220ENST00000411464 MTCH2Q9Y6C9 303 aa19.58■□□□□ 0.72
MRPL55-220ENST00000411464 LRRC37A2A6NM11 1700 aa19.57■□□□□ 0.72
MRPL55-220ENST00000411464 ARIH2O95376 493 aa19.57■□□□□ 0.72
MRPL55-220ENST00000411464 SEPT14Q6ZU15 432 aa19.57■□□□□ 0.72
MRPL55-220ENST00000411464 TBC1D10CQ8IV04 446 aa19.57■□□□□ 0.72
MRPL55-220ENST00000411464 NSUN6Q8TEA1 469 aaKnown RBP19.57■□□□□ 0.72
MRPL55-220ENST00000411464 AFG1LQ8WV93 481 aa19.57■□□□□ 0.72
MRPL55-220ENST00000411464 ARNTL2Q8WYA1 636 aa19.57■□□□□ 0.72
MRPL55-220ENST00000411464 RILPL2Q969X0 211 aa19.57■□□□□ 0.72
MRPL55-220ENST00000411464 ZKSCAN3Q9BRR0 538 aa19.57■□□□□ 0.72
MRPL55-220ENST00000411464 MAF1Q9H063 256 aa19.57■□□□□ 0.72
MRPL55-220ENST00000411464 ZNF213O14771 459 aa19.56■□□□□ 0.72
MRPL55-220ENST00000411464 BAIAP3O94812 1187 aa19.56■□□□□ 0.72
MRPL55-220ENST00000411464 GH1P01241 217 aa19.56■□□□□ 0.72
MRPL55-220ENST00000411464 KCNJ6P48051 423 aa19.56■□□□□ 0.72
MRPL55-220ENST00000411464 TAP1Q03518 808 aa19.56■□□□□ 0.72
MRPL55-220ENST00000411464 HDAC1Q13547 482 aaPredicted RBP19.56■□□□□ 0.72
MRPL55-220ENST00000411464 CCDC178Q5BJE1 867 aa19.56■□□□□ 0.72
MRPL55-220ENST00000411464 CCDC62Q6P9F0 684 aa19.56■□□□□ 0.72
MRPL55-220ENST00000411464 MCF2L2Q86YR7 1114 aa19.56■□□□□ 0.72
MRPL55-220ENST00000411464 CPVLQ9H3G5 476 aa19.56■□□□□ 0.72
MRPL55-220ENST00000411464 ABCB11O95342 1321 aa19.55■□□□□ 0.72
MRPL55-220ENST00000411464 TLL1O43897 1013 aa19.55■□□□□ 0.72
MRPL55-220ENST00000411464 CASTP20810 708 aaKnown RBP19.55■□□□□ 0.72
MRPL55-220ENST00000411464 NT5C2P49902 561 aa19.55■□□□□ 0.72
MRPL55-220ENST00000411464 MYO9BQ13459 2157 aa19.55■□□□□ 0.72
MRPL55-220ENST00000411464 STXBP2Q15833 593 aa19.55■□□□□ 0.72
MRPL55-220ENST00000411464 CDC37Q16543 378 aaPredicted RBP19.55■□□□□ 0.72
MRPL55-220ENST00000411464 LY6KQ17RY6 165 aa19.55■□□□□ 0.72
MRPL55-220ENST00000411464 CHST3Q7LGC8 479 aa19.55■□□□□ 0.72
MRPL55-220ENST00000411464 IQCA1Q86XH1 822 aa19.55■□□□□ 0.72
MRPL55-220ENST00000411464 PNMA1Q8ND90 353 aa19.55■□□□□ 0.72
MRPL55-220ENST00000411464 CAGE1Q8TC20 777 aa19.55■□□□□ 0.72
MRPL55-220ENST00000411464 AFAP1L1Q8TED9 768 aa19.55■□□□□ 0.72
MRPL55-220ENST00000411464 NECAB3Q96P71 396 aaPredicted RBP19.55■□□□□ 0.72
MRPL55-220ENST00000411464 TAAR1Q96RJ0 339 aa19.55■□□□□ 0.72
MRPL55-220ENST00000411464 IWS1Q96ST2 819 aa19.55■□□□□ 0.72
MRPL55-220ENST00000411464 KAT14Q9H8E8 782 aa19.55■□□□□ 0.72
MRPL55-220ENST00000411464 MMP3P08254 477 aa19.54■□□□□ 0.72
MRPL55-220ENST00000411464 KCNQ1P51787 676 aa19.54■□□□□ 0.72
MRPL55-220ENST00000411464 RRP1P56182 461 aaKnown RBP19.54■□□□□ 0.72
MRPL55-220ENST00000411464 ADGRF4Q8IZF3 695 aa19.54■□□□□ 0.72
MRPL55-220ENST00000411464 SYTL5Q8TDW5 730 aaPredicted RBP19.54■□□□□ 0.72
MRPL55-220ENST00000411464 TBC1D5Q92609 795 aa19.54■□□□□ 0.72
MRPL55-220ENST00000411464 RMDN3Q96TC7 470 aa19.54■□□□□ 0.72
MRPL55-220ENST00000411464 ZBED2Q9BTP6 218 aa19.54■□□□□ 0.72
MRPL55-220ENST00000411464 COG5Q9UP83 839 aa19.54■□□□□ 0.72
MRPL55-220ENST00000411464 NEDD4P46934 1319 aa19.53■□□□□ 0.72
MRPL55-220ENST00000411464 EPOPA6NHQ4 379 aa19.53■□□□□ 0.72
MRPL55-220ENST00000411464 DHX16O60231 1041 aaKnown RBP19.53■□□□□ 0.72
MRPL55-220ENST00000411464 SELPP16109 830 aa19.53■□□□□ 0.72
MRPL55-220ENST00000411464 SDSP20132 328 aa19.53■□□□□ 0.72
MRPL55-220ENST00000411464 ARHGAP1Q07960 439 aa19.53■□□□□ 0.72
MRPL55-220ENST00000411464 DGKDQ16760 1214 aa19.53■□□□□ 0.72
MRPL55-220ENST00000411464 ARHGEF16Q5VV41 709 aa19.53■□□□□ 0.72
MRPL55-220ENST00000411464 GDF6Q6KF10 455 aaPredicted RBP19.53■□□□□ 0.72
MRPL55-220ENST00000411464 SESTD1Q86VW0 696 aa19.53■□□□□ 0.72
MRPL55-220ENST00000411464 CRBNQ96SW2 442 aa19.53■□□□□ 0.72
MRPL55-220ENST00000411464 LNPKQ9C0E8 428 aa19.53■□□□□ 0.72
MRPL55-220ENST00000411464 MRPL11Q9Y3B7 192 aaKnown RBP19.53■□□□□ 0.72
MRPL55-220ENST00000411464 KDM4AO75164 1064 aa19.52■□□□□ 0.72
MRPL55-220ENST00000411464 EIF3JO75822 258 aaKnown RBP19.52■□□□□ 0.72
MRPL55-220ENST00000411464 PARNO95453 639 aaKnown RBP19.52■□□□□ 0.72
MRPL55-220ENST00000411464 ASPRV1Q53RT3 343 aa19.52■□□□□ 0.72
MRPL55-220ENST00000411464 KRT40Q6A162 431 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms