RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 RNF26Q9BY78 433 aaPredicted RBP27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 PSTPIP2Q9H939 334 aa27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 PXMP2Q9NR77 195 aa27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 OGDHLQ9ULD0 1010 aa27.47■■□□□ 1.99
UBE2E3-202ENST00000410062 STXBP3O00186 592 aa27.46■■□□□ 1.99
UBE2E3-202ENST00000410062 SCG2P13521 617 aa27.46■■□□□ 1.99
UBE2E3-202ENST00000410062 EDNRBP24530 442 aa27.46■■□□□ 1.99
UBE2E3-202ENST00000410062 RGS19P49795 217 aa27.46■■□□□ 1.99
UBE2E3-202ENST00000410062 MPHOSPH6Q99547 160 aaKnown RBP27.46■■□□□ 1.99
UBE2E3-202ENST00000410062 BARHL2Q9NY43 387 aa27.46■■□□□ 1.99
UBE2E3-202ENST00000410062 FAM184BQ9ULE4 1060 aa27.46■■□□□ 1.99
UBE2E3-202ENST00000410062 MEIS2O14770 477 aa27.45■■□□□ 1.99
UBE2E3-202ENST00000410062 NECAB1Q8N987 351 aa27.45■■□□□ 1.99
UBE2E3-202ENST00000410062 CUL5Q93034 780 aa27.45■■□□□ 1.99
UBE2E3-202ENST00000410062 PDGFCQ9NRA1 345 aa27.45■■□□□ 1.99
UBE2E3-202ENST00000410062 RBM27Q9P2N5 1060 aaKnown RBP27.45■■□□□ 1.99
UBE2E3-202ENST00000410062 hCG_1984214I3L0E3 225 aa27.44■■□□□ 1.98
UBE2E3-202ENST00000410062 CPLX2Q6PUV4 134 aaKnown RBP27.44■■□□□ 1.98
UBE2E3-202ENST00000410062 ZNF713Q8N859 430 aaPredicted RBP27.44■■□□□ 1.98
UBE2E3-202ENST00000410062 SMARCC2Q8TAQ2 1214 aa27.44■■□□□ 1.98
UBE2E3-202ENST00000410062 VTA1Q9NP79 307 aa27.44■■□□□ 1.98
UBE2E3-202ENST00000410062 B4DLN1 442 aa27.43■■□□□ 1.98
UBE2E3-202ENST00000410062 PIK3CDO00329 1044 aa27.43■■□□□ 1.98
UBE2E3-202ENST00000410062 ADCY6O43306 1168 aa27.43■■□□□ 1.98
UBE2E3-202ENST00000410062 DTNBO60941 627 aa27.43■■□□□ 1.98
UBE2E3-202ENST00000410062 RARBP10826 455 aa27.43■■□□□ 1.98
UBE2E3-202ENST00000410062 ADCYAP1R1P41586 468 aa27.43■■□□□ 1.98
UBE2E3-202ENST00000410062 MRPL12P52815 198 aaKnown RBP27.43■■□□□ 1.98
UBE2E3-202ENST00000410062 SSRP1Q08945 709 aaKnown RBP27.43■■□□□ 1.98
UBE2E3-202ENST00000410062 UBE2SQ16763 222 aa27.43■■□□□ 1.98
UBE2E3-202ENST00000410062 TAPT1Q6NXT6 567 aa27.43■■□□□ 1.98
UBE2E3-202ENST00000410062 IWS1Q96ST2 819 aa27.43■■□□□ 1.98
UBE2E3-202ENST00000410062 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.43■■□□□ 1.98
UBE2E3-202ENST00000410062 RABEP1Q15276 862 aa27.43■■□□□ 1.98
UBE2E3-202ENST00000410062 PPP1R18Q6NYC8 613 aa27.43■■□□□ 1.98
UBE2E3-202ENST00000410062 TRIM22Q8IYM9 498 aa27.43■■□□□ 1.98
UBE2E3-202ENST00000410062 DIS3LQ8TF46 1054 aaKnown RBP27.42■■□□□ 1.98
UBE2E3-202ENST00000410062 PDCD2LQ9BRP1 358 aa27.42■■□□□ 1.98
UBE2E3-202ENST00000410062 SMCO2A6NFE2 343 aa27.41■■□□□ 1.98
UBE2E3-202ENST00000410062 FARP2O94887 1054 aaPredicted RBP27.41■■□□□ 1.98
UBE2E3-202ENST00000410062 MYCNP04198 464 aaPredicted RBP27.41■■□□□ 1.98
UBE2E3-202ENST00000410062 NR3C2P08235 984 aa27.41■■□□□ 1.98
UBE2E3-202ENST00000410062 MNX1P50219 401 aaPredicted RBP27.41■■□□□ 1.98
UBE2E3-202ENST00000410062 IL31RAQ8NI17 732 aa27.41■■□□□ 1.98
UBE2E3-202ENST00000410062 GTF3C6Q969F1 213 aa27.41■■□□□ 1.98
UBE2E3-202ENST00000410062 XPNPEP3Q9NQH7 507 aa27.41■■□□□ 1.98
UBE2E3-202ENST00000410062 LIMCH1Q9UPQ0 1083 aa27.41■■□□□ 1.98
UBE2E3-202ENST00000410062 PGK1P00558 417 aa27.4■■□□□ 1.98
UBE2E3-202ENST00000410062 CAPN2P17655 700 aa27.4■■□□□ 1.98
UBE2E3-202ENST00000410062 PGM5Q15124 567 aa27.4■■□□□ 1.98
UBE2E3-202ENST00000410062 STXBP2Q15833 593 aa27.4■■□□□ 1.98
UBE2E3-202ENST00000410062 TMEM63BQ5T3F8 832 aa27.4■■□□□ 1.98
UBE2E3-202ENST00000410062 ANKLE1Q8NAG6 615 aa27.4■■□□□ 1.98
UBE2E3-202ENST00000410062 RIC8AQ9NPQ8 531 aa27.4■■□□□ 1.98
UBE2E3-202ENST00000410062 CDKL5O76039 1030 aa27.39■■□□□ 1.98
UBE2E3-202ENST00000410062 CTDNEP1O95476 244 aa27.39■■□□□ 1.98
UBE2E3-202ENST00000410062 MYCLP12524 364 aaPredicted RBP27.39■■□□□ 1.98
UBE2E3-202ENST00000410062 PTGS1P23219 599 aa27.39■■□□□ 1.98
UBE2E3-202ENST00000410062 ADCY7P51828 1080 aa27.39■■□□□ 1.98
UBE2E3-202ENST00000410062 TNFAIP2Q03169 654 aa27.39■■□□□ 1.98
UBE2E3-202ENST00000410062 UBE2Q1Q7Z7E8 422 aa27.39■■□□□ 1.98
UBE2E3-202ENST00000410062 DUSP11O75319 330 aaKnown RBP27.39■■□□□ 1.97
UBE2E3-202ENST00000410062 SMPD1P17405 629 aa27.39■■□□□ 1.97
UBE2E3-202ENST00000410062 GJC2Q5T442 439 aaPredicted RBP27.39■■□□□ 1.97
UBE2E3-202ENST00000410062 IQSEC1Q6DN90 963 aa27.39■■□□□ 1.97
UBE2E3-202ENST00000410062 PAWRQ96IZ0 340 aaKnown RBP27.39■■□□□ 1.97
UBE2E3-202ENST00000410062 ZFP91Q96JP5 570 aaPredicted RBP27.39■■□□□ 1.97
UBE2E3-202ENST00000410062 VPS54Q9P1Q0 977 aa27.39■■□□□ 1.97
UBE2E3-202ENST00000410062 DEXIO95424 95 aa27.38■■□□□ 1.97
UBE2E3-202ENST00000410062 WDR11Q9BZH6 1224 aa27.38■■□□□ 1.97
UBE2E3-202ENST00000410062 FRMPD4Q14CM0 1322 aa27.37■■□□□ 1.97
UBE2E3-202ENST00000410062 SYNRGQ9UMZ2 1314 aa27.37■■□□□ 1.97
UBE2E3-202ENST00000410062 EIF3JO75822 258 aaKnown RBP27.37■■□□□ 1.97
UBE2E3-202ENST00000410062 ST3GAL1Q11201 340 aa27.37■■□□□ 1.97
UBE2E3-202ENST00000410062 SEPT14Q6ZU15 432 aa27.37■■□□□ 1.97
UBE2E3-202ENST00000410062 VSIG10LQ86VR7 867 aa27.37■■□□□ 1.97
UBE2E3-202ENST00000410062 ARRDC4Q8NCT1 418 aa27.37■■□□□ 1.97
UBE2E3-202ENST00000410062 CCDC12Q8WUD4 166 aaPredicted RBP27.37■■□□□ 1.97
UBE2E3-202ENST00000410062 AIFM3Q96NN9 605 aa27.37■■□□□ 1.97
UBE2E3-202ENST00000410062 TNRC18O15417 2968 aaPredicted RBP27.36■■□□□ 1.97
UBE2E3-202ENST00000410062 RBM47A0AV96 593 aaKnown RBP27.36■■□□□ 1.97
UBE2E3-202ENST00000410062 IRX5P78411 483 aaPredicted RBP27.36■■□□□ 1.97
UBE2E3-202ENST00000410062 LRRC41Q15345 812 aa27.36■■□□□ 1.97
UBE2E3-202ENST00000410062 ZMYND12Q9H0C1 365 aa27.36■■□□□ 1.97
UBE2E3-202ENST00000410062 PCDHA6Q9UN73 950 aa27.36■■□□□ 1.97
UBE2E3-202ENST00000410062 GNEQ9Y223 722 aaKnown RBP27.36■■□□□ 1.97
UBE2E3-202ENST00000410062 PCDHA8Q9Y5H6 950 aa27.36■■□□□ 1.97
UBE2E3-202ENST00000410062 SPDYE3A6NKU9 549 aa27.35■■□□□ 1.97
UBE2E3-202ENST00000410062 ADAMTS3O15072 1205 aa27.35■■□□□ 1.97
UBE2E3-202ENST00000410062 ST18O60284 1047 aa27.35■■□□□ 1.97
UBE2E3-202ENST00000410062 ADAMTS4O75173 837 aa27.35■■□□□ 1.97
UBE2E3-202ENST00000410062 CCND2P30279 289 aa27.35■■□□□ 1.97
UBE2E3-202ENST00000410062 MLLT1Q03111 559 aaPredicted RBP27.35■■□□□ 1.97
UBE2E3-202ENST00000410062 SCFD2Q8WU76 684 aa27.35■■□□□ 1.97
UBE2E3-202ENST00000410062 PGBD1Q96JS3 809 aa27.35■■□□□ 1.97
UBE2E3-202ENST00000410062 C6orf50Q9HD87 102 aa27.35■■□□□ 1.97
UBE2E3-202ENST00000410062 TMEM260Q9NX78 707 aa27.35■■□□□ 1.97
UBE2E3-202ENST00000410062 KIAA1217Q5T5P2 1943 aa27.35■■□□□ 1.97
UBE2E3-202ENST00000410062 ESYT2A0FGR8 921 aa27.35■■□□□ 1.97
UBE2E3-202ENST00000410062 DNM1LO00429 736 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms