RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 MORC4Q8TE76 937 aa12.6□□□□□ -0.39
CCDC148-203ENST00000409889 PURBQ96QR8 312 aaKnown RBP12.6□□□□□ -0.39
CCDC148-203ENST00000409889 MKNK2Q9HBH9 465 aa12.6□□□□□ -0.39
CCDC148-203ENST00000409889 EXOC6BQ9Y2D4 811 aa12.6□□□□□ -0.39
CCDC148-203ENST00000409889 RAD50Q92878 1312 aa12.6□□□□□ -0.39
CCDC148-203ENST00000409889 IGKV6D-41A0A0C4DH26 115 aa12.59□□□□□ -0.39
CCDC148-203ENST00000409889 CHGBP05060 677 aa12.59□□□□□ -0.39
CCDC148-203ENST00000409889 SELPP16109 830 aa12.59□□□□□ -0.39
CCDC148-203ENST00000409889 CHMP4BP1P59074 171 aa12.59□□□□□ -0.39
CCDC148-203ENST00000409889 TCF15Q12870 199 aa12.59□□□□□ -0.39
CCDC148-203ENST00000409889 IKQ13123 557 aaPredicted RBP12.59□□□□□ -0.39
CCDC148-203ENST00000409889 PTGISQ16647 500 aa12.59□□□□□ -0.39
CCDC148-203ENST00000409889 TCTN1Q2MV58 587 aa12.59□□□□□ -0.39
CCDC148-203ENST00000409889 TCEAL5Q5H9L2 206 aa12.59□□□□□ -0.39
CCDC148-203ENST00000409889 NSMFQ6X4W1 530 aa12.59□□□□□ -0.39
CCDC148-203ENST00000409889 BANK1Q8NDB2 785 aa12.59□□□□□ -0.39
CCDC148-203ENST00000409889 MKL1Q969V6 931 aa12.59□□□□□ -0.39
CCDC148-203ENST00000409889 CEP95Q96GE4 821 aa12.59□□□□□ -0.39
CCDC148-203ENST00000409889 POP1Q99575 1024 aaKnown RBP12.59□□□□□ -0.39
CCDC148-203ENST00000409889 PRRX2Q99811 253 aa12.59□□□□□ -0.39
CCDC148-203ENST00000409889 IL1RAPL2Q9NP60 686 aa12.59□□□□□ -0.39
CCDC148-203ENST00000409889 CACNA1HO95180 2353 aa12.59□□□□□ -0.39
CCDC148-203ENST00000409889 ABHD14A-ACY1A0A1B0GW23 586 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 NBNO60934 754 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 EFCAB14O75071 495 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 TTLL1O95922 423 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 CXCL10P02778 98 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 PLXNA3P51805 1871 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 COL19A1Q14993 1142 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 SLFN13Q68D06 897 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 CTAGE1Q96RT6 745 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.58□□□□□ -0.4
CCDC148-203ENST00000409889 FAM86C1Q9NVL1 165 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 PAG1Q9NWQ8 432 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 CLDND1Q9NY35 253 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 MTMR4Q9NYA4 1195 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 SYNPO2Q9UMS6 1093 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 INSL6Q9Y581 213 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 MYO7AQ13402 2215 aa12.58□□□□□ -0.4
CCDC148-203ENST00000409889 RBM47A0AV96 593 aaKnown RBP12.57□□□□□ -0.4
CCDC148-203ENST00000409889 A6NJR5 290 aa12.57□□□□□ -0.4
CCDC148-203ENST00000409889 KPNA6O60684 536 aa12.57□□□□□ -0.4
CCDC148-203ENST00000409889 PARNO95453 639 aaKnown RBP12.57□□□□□ -0.4
CCDC148-203ENST00000409889 ALDH5A1P51649 535 aaPredicted RBP12.57□□□□□ -0.4
CCDC148-203ENST00000409889 IKBKEQ14164 716 aa12.57□□□□□ -0.4
CCDC148-203ENST00000409889 PPP2R5BQ15173 497 aa12.57□□□□□ -0.4
CCDC148-203ENST00000409889 SMAD2Q15796 467 aaKnown RBP12.57□□□□□ -0.4
CCDC148-203ENST00000409889 EPC2Q52LR7 807 aa12.57□□□□□ -0.4
CCDC148-203ENST00000409889 GDF6Q6KF10 455 aaPredicted RBP12.57□□□□□ -0.4
CCDC148-203ENST00000409889 BMP8AQ7Z5Y6 402 aa12.57□□□□□ -0.4
CCDC148-203ENST00000409889 FAM160B2Q86V87 743 aa12.57□□□□□ -0.4
CCDC148-203ENST00000409889 RNF135Q8IUD6 432 aa12.57□□□□□ -0.4
CCDC148-203ENST00000409889 SUGP1Q8IWZ8 645 aaKnown RBP12.57□□□□□ -0.4
CCDC148-203ENST00000409889 CHURC1Q8WUH1 139 aa12.57□□□□□ -0.4
CCDC148-203ENST00000409889 DHX38Q92620 1227 aaKnown RBP12.57□□□□□ -0.4
CCDC148-203ENST00000409889 EDAQ92838 391 aa12.57□□□□□ -0.4
CCDC148-203ENST00000409889 NSUN3Q9H649 340 aaKnown RBP12.57□□□□□ -0.4
CCDC148-203ENST00000409889 ADD3Q9UEY8 706 aaKnown RBP12.57□□□□□ -0.4
CCDC148-203ENST00000409889 DNAH14Q0VDD8 3507 aa12.57□□□□□ -0.4
CCDC148-203ENST00000409889 TMEM221A6NGB7 291 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 MINDY4BA8MYZ0 360 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 RBAK-RBAKDNI3L0D1 243 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 M0R296 226 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 NKRFO15226 690 aaKnown RBP eCLIP12.56□□□□□ -0.4
CCDC148-203ENST00000409889 CKBP12277 381 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 SNAP25P60880 206 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 UBE3CQ15386 1083 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 CLUL1Q15846 466 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 PKN1Q16512 942 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 SBK1Q52WX2 424 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 RPAINQ86UA6 219 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 RHPN1Q8TCX5 695 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 STAG1Q8WVM7 1258 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 COPS5Q92905 334 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 PBXIP1Q96AQ6 731 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 CHMP4CQ96CF2 233 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 SAMD11Q96NU1 681 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 PUS7LQ9H0K6 701 aaKnown RBP12.56□□□□□ -0.4
CCDC148-203ENST00000409889 CCPG1Q9ULG6 757 aa12.56□□□□□ -0.4
CCDC148-203ENST00000409889 COL4A6Q14031 1691 aa12.55□□□□□ -0.4
CCDC148-203ENST00000409889 H3BNC9 293 aa12.55□□□□□ -0.4
CCDC148-203ENST00000409889 PRDM1O75626 825 aa12.55□□□□□ -0.4
CCDC148-203ENST00000409889 LTBRP36941 435 aa12.55□□□□□ -0.4
CCDC148-203ENST00000409889 SLC1A4P43007 532 aa12.55□□□□□ -0.4
CCDC148-203ENST00000409889 HTRA4P83105 476 aaPredicted RBP12.55□□□□□ -0.4
CCDC148-203ENST00000409889 RBL2Q08999 1139 aa12.55□□□□□ -0.4
CCDC148-203ENST00000409889 GPM6BQ13491 265 aa12.55□□□□□ -0.4
CCDC148-203ENST00000409889 BAATQ14032 418 aaPredicted RBP12.55□□□□□ -0.4
CCDC148-203ENST00000409889 CEP85Q6P2H3 762 aa12.55□□□□□ -0.4
CCDC148-203ENST00000409889 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCDC148-203ENST00000409889 TRIM67Q6ZTA4 783 aa12.55□□□□□ -0.4
CCDC148-203ENST00000409889 MYOCDQ8IZQ8 938 aa12.55□□□□□ -0.4
CCDC148-203ENST00000409889 ZNF444Q8N0Y2 327 aaPredicted RBP12.55□□□□□ -0.4
CCDC148-203ENST00000409889 BCL11AQ9H165 835 aa12.55□□□□□ -0.4
CCDC148-203ENST00000409889 BOLA2Q9H3K6 86 aa12.55□□□□□ -0.4
CCDC148-203ENST00000409889 PLIN4Q96Q06 1357 aa12.55□□□□□ -0.4
CCDC148-203ENST00000409889 PTPRZ1P23471 2315 aaPredicted RBP12.54□□□□□ -0.4
CCDC148-203ENST00000409889 WDR87Q6ZQQ6 2873 aa12.54□□□□□ -0.4
CCDC148-203ENST00000409889 LOC102724159A0A0B4J2E5 919 aa12.54□□□□□ -0.4
CCDC148-203ENST00000409889 MBTPS2O43462 519 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms