RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 ASTN1O14525 1302 aa19.03■□□□□ 0.64
SUMO1-208ENST00000409627 RPTORQ8N122 1335 aa19.03■□□□□ 0.64
SUMO1-208ENST00000409627 MCM3APO60318 1980 aa19.03■□□□□ 0.64
SUMO1-208ENST00000409627 SPDYE3A6NKU9 549 aa19.03■□□□□ 0.64
SUMO1-208ENST00000409627 ADAMTS3O15072 1205 aa19.03■□□□□ 0.64
SUMO1-208ENST00000409627 ALDH5A1P51649 535 aaPredicted RBP19.03■□□□□ 0.64
SUMO1-208ENST00000409627 GUCY1B3Q02153 619 aa19.03■□□□□ 0.64
SUMO1-208ENST00000409627 SAFBQ15424 915 aaKnown RBP eCLIP19.03■□□□□ 0.64
SUMO1-208ENST00000409627 OLFML2BQ68BL8 750 aa19.03■□□□□ 0.64
SUMO1-208ENST00000409627 TRMT44Q8IYL2 757 aaKnown RBP19.03■□□□□ 0.64
SUMO1-208ENST00000409627 MSL3Q8N5Y2 521 aaKnown RBP19.03■□□□□ 0.64
SUMO1-208ENST00000409627 SPRYD3Q8NCJ5 442 aa19.03■□□□□ 0.64
SUMO1-208ENST00000409627 NSUN6Q8TEA1 469 aaKnown RBP19.03■□□□□ 0.64
SUMO1-208ENST00000409627 RMDN3Q96TC7 470 aa19.03■□□□□ 0.64
SUMO1-208ENST00000409627 ANO3Q9BYT9 981 aa19.03■□□□□ 0.64
SUMO1-208ENST00000409627 TMEM260Q9NX78 707 aa19.03■□□□□ 0.64
SUMO1-208ENST00000409627 BIN2Q9UBW5 565 aaPredicted RBP19.03■□□□□ 0.64
SUMO1-208ENST00000409627 PCDHA6Q9UN73 950 aa19.03■□□□□ 0.64
SUMO1-208ENST00000409627 PCDHA8Q9Y5H6 950 aa19.03■□□□□ 0.64
SUMO1-208ENST00000409627 MYH7BA7E2Y1 1941 aa19.03■□□□□ 0.64
SUMO1-208ENST00000409627 ARHGEF16Q5VV41 709 aa19.02■□□□□ 0.64
SUMO1-208ENST00000409627 JAKMIP3Q5VZ66 844 aa19.02■□□□□ 0.64
SUMO1-208ENST00000409627 MAMDC4Q6UXC1 1216 aa19.02■□□□□ 0.64
SUMO1-208ENST00000409627 DIS3L2Q8IYB7 885 aaKnown RBP19.02■□□□□ 0.64
SUMO1-208ENST00000409627 RAET1EQ8TD07 263 aa19.02■□□□□ 0.64
SUMO1-208ENST00000409627 MPHOSPH6Q99547 160 aaKnown RBP19.02■□□□□ 0.64
SUMO1-208ENST00000409627 EHMT1Q9H9B1 1298 aa19.02■□□□□ 0.64
SUMO1-208ENST00000409627 PXMP2Q9NR77 195 aa19.02■□□□□ 0.64
SUMO1-208ENST00000409627 PTPN22Q9Y2R2 807 aa19.02■□□□□ 0.64
SUMO1-208ENST00000409627 ASB14A6NK59 587 aa19.01■□□□□ 0.63
SUMO1-208ENST00000409627 B4DLN1 442 aa19.01■□□□□ 0.63
SUMO1-208ENST00000409627 H3BQV1 296 aa19.01■□□□□ 0.63
SUMO1-208ENST00000409627 IGHA2P01877 340 aa19.01■□□□□ 0.63
SUMO1-208ENST00000409627 EDNRBP24530 442 aa19.01■□□□□ 0.63
SUMO1-208ENST00000409627 IFFO2Q5TF58 517 aa19.01■□□□□ 0.63
SUMO1-208ENST00000409627 RASGRP4Q8TDF6 673 aa19.01■□□□□ 0.63
SUMO1-208ENST00000409627 OXER1Q8TDS5 423 aa19.01■□□□□ 0.63
SUMO1-208ENST00000409627 MORC4Q8TE76 937 aa19.01■□□□□ 0.63
SUMO1-208ENST00000409627 PXYLP1Q8TE99 480 aa19.01■□□□□ 0.63
SUMO1-208ENST00000409627 IWS1Q96ST2 819 aa19.01■□□□□ 0.63
SUMO1-208ENST00000409627 SYNGAP1Q96PV0 1343 aa19■□□□□ 0.63
SUMO1-208ENST00000409627 KIAA1217Q5T5P2 1943 aa19■□□□□ 0.63
SUMO1-208ENST00000409627 BTBD18B2RXH4 712 aa19■□□□□ 0.63
SUMO1-208ENST00000409627 PDIA4P13667 645 aaKnown RBP19■□□□□ 0.63
SUMO1-208ENST00000409627 EIF2AK2P19525 551 aaKnown RBP19■□□□□ 0.63
SUMO1-208ENST00000409627 SYT1P21579 422 aa19■□□□□ 0.63
SUMO1-208ENST00000409627 NR5A1Q13285 461 aa19■□□□□ 0.63
SUMO1-208ENST00000409627 PGM5Q15124 567 aa19■□□□□ 0.63
SUMO1-208ENST00000409627 PKN2Q16513 984 aaKnown RBP19■□□□□ 0.63
SUMO1-208ENST00000409627 CCL14Q16627 93 aa19■□□□□ 0.63
SUMO1-208ENST00000409627 KRT25Q7Z3Z0 450 aa19■□□□□ 0.63
SUMO1-208ENST00000409627 TRIB2Q92519 343 aa19■□□□□ 0.63
SUMO1-208ENST00000409627 TNFRSF25Q93038 417 aa19■□□□□ 0.63
SUMO1-208ENST00000409627 PDCD2LQ9BRP1 358 aa19■□□□□ 0.63
SUMO1-208ENST00000409627 TINF2Q9BSI4 451 aa19■□□□□ 0.63
SUMO1-208ENST00000409627 FOXP1Q9H334 677 aaPredicted RBP19■□□□□ 0.63
SUMO1-208ENST00000409627 FLRT1Q9NZU1 646 aa19■□□□□ 0.63
SUMO1-208ENST00000409627 PTCH2Q9Y6C5 1203 aa19■□□□□ 0.63
SUMO1-208ENST00000409627 ADCY3O60266 1144 aa18.99■□□□□ 0.63
SUMO1-208ENST00000409627 SREBF1P36956 1147 aa18.99■□□□□ 0.63
SUMO1-208ENST00000409627 ARMCX2Q7L311 632 aa18.99■□□□□ 0.63
SUMO1-208ENST00000409627 SLAIN1Q8ND83 568 aa18.99■□□□□ 0.63
SUMO1-208ENST00000409627 PGBD1Q96JS3 809 aa18.99■□□□□ 0.63
SUMO1-208ENST00000409627 CCDC194A0A1B0GVG4 234 aa18.98■□□□□ 0.63
SUMO1-208ENST00000409627 STX6O43752 255 aa18.98■□□□□ 0.63
SUMO1-208ENST00000409627 NR3C2P08235 984 aa18.98■□□□□ 0.63
SUMO1-208ENST00000409627 U2AF2P26368 475 aaKnown RBP eCLIP18.98■□□□□ 0.63
SUMO1-208ENST00000409627 NONOQ15233 471 aaKnown RBP eCLIP18.98■□□□□ 0.63
SUMO1-208ENST00000409627 PCNX4Q63HM2 1172 aa18.98■□□□□ 0.63
SUMO1-208ENST00000409627 XRRA1Q6P2D8 792 aa18.98■□□□□ 0.63
SUMO1-208ENST00000409627 FBXO46Q6PJ61 603 aaPredicted RBP18.98■□□□□ 0.63
SUMO1-208ENST00000409627 IL31RAQ8NI17 732 aa18.98■□□□□ 0.63
SUMO1-208ENST00000409627 CRYGNQ8WXF5 182 aa18.98■□□□□ 0.63
SUMO1-208ENST00000409627 DAXXQ9UER7 740 aaPredicted RBP18.98■□□□□ 0.63
SUMO1-208ENST00000409627 VPS37CA5D8V6 355 aaPredicted RBP18.97■□□□□ 0.63
SUMO1-208ENST00000409627 HMGCRP04035 888 aa18.97■□□□□ 0.63
SUMO1-208ENST00000409627 ELNP15502 786 aa18.97■□□□□ 0.63
SUMO1-208ENST00000409627 CCND2P30279 289 aa18.97■□□□□ 0.63
SUMO1-208ENST00000409627 UBXN2AP68543 259 aa18.97■□□□□ 0.63
SUMO1-208ENST00000409627 PDE4DQ08499 809 aa18.97■□□□□ 0.63
SUMO1-208ENST00000409627 GNL2Q13823 731 aaKnown RBP18.97■□□□□ 0.63
SUMO1-208ENST00000409627 MFSD14CQ5VZR4 134 aa18.97■□□□□ 0.63
SUMO1-208ENST00000409627 VSIG10LQ86VR7 867 aa18.97■□□□□ 0.63
SUMO1-208ENST00000409627 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.97■□□□□ 0.63
SUMO1-208ENST00000409627 KIF28PB7ZC32 967 aa18.96■□□□□ 0.63
SUMO1-208ENST00000409627 STAM2O75886 525 aa18.96■□□□□ 0.63
SUMO1-208ENST00000409627 SNAI1O95863 264 aaPredicted RBP18.96■□□□□ 0.63
SUMO1-208ENST00000409627 CYP3A4P08684 503 aa18.96■□□□□ 0.63
SUMO1-208ENST00000409627 GRK4P32298 578 aa18.96■□□□□ 0.63
SUMO1-208ENST00000409627 ARHGAP4P98171 946 aa18.96■□□□□ 0.63
SUMO1-208ENST00000409627 STXBP2Q15833 593 aa18.96■□□□□ 0.63
SUMO1-208ENST00000409627 PIK3AP1Q6ZUJ8 805 aa18.96■□□□□ 0.63
SUMO1-208ENST00000409627 NOSTRINQ8IVI9 506 aa18.96■□□□□ 0.63
SUMO1-208ENST00000409627 TBCKQ8TEA7 893 aa18.96■□□□□ 0.63
SUMO1-208ENST00000409627 NRBP1Q9UHY1 535 aa18.96■□□□□ 0.63
SUMO1-208ENST00000409627 MTMR6Q9Y217 621 aa18.96■□□□□ 0.63
SUMO1-208ENST00000409627 MYH15Q9Y2K3 1946 aa18.96■□□□□ 0.63
SUMO1-208ENST00000409627 EIF3JO75822 258 aaKnown RBP18.95■□□□□ 0.62
SUMO1-208ENST00000409627 MYCLP12524 364 aaPredicted RBP18.95■□□□□ 0.62
SUMO1-208ENST00000409627 CYP2C19P33261 490 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms