RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 POTEGQ6S5H5 508 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 POTEEQ6S8J3 1075 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 FAM178BQ8IXR5 827 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 INO80BQ9C086 356 aaPredicted RBP12.69□□□□□ -0.38
SNX13-202ENST00000409604 RPS12P25398 132 aaKnown RBP12.69□□□□□ -0.38
SNX13-202ENST00000409604 GPRC5DQ9NZD1 345 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 PRPF4BQ13523 1007 aaKnown RBP12.69□□□□□ -0.38
SNX13-202ENST00000409604 SESTD1Q86VW0 696 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 FNBP1Q96RU3 617 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 NMRK2Q9NPI5 230 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 CPA4Q9UI42 421 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 FEM1BQ9UK73 627 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 RCOR1Q9UKL0 485 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 TMCO5BA8MYB1 307 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 K7ENM7 598 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 TNPO2O14787 897 aaKnown RBP12.69□□□□□ -0.38
SNX13-202ENST00000409604 URI1O94763 535 aaPredicted RBP12.69□□□□□ -0.38
SNX13-202ENST00000409604 SKILP12757 684 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 ANKRD13AQ8IZ07 590 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 NLRP4Q96MN2 994 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 PANK4Q9NVE7 773 aa12.69□□□□□ -0.38
SNX13-202ENST00000409604 STRCQ7RTU9 1775 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 SYNRGQ9UMZ2 1314 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 PAK1Q13153 545 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 DEPTORQ8TB45 409 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 PURBQ96QR8 312 aaKnown RBP12.68□□□□□ -0.38
SNX13-202ENST00000409604 ADD3Q9UEY8 706 aaKnown RBP12.68□□□□□ -0.38
SNX13-202ENST00000409604 TERF1P54274 439 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 NFX1Q12986 1120 aaKnown RBP12.68□□□□□ -0.38
SNX13-202ENST00000409604 GPC2Q8N158 579 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 ZNF384Q8TF68 577 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 LARP4BQ92615 738 aaKnown RBP12.68□□□□□ -0.38
SNX13-202ENST00000409604 PSMD1Q99460 953 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 SPC25Q9HBM1 224 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 LZTFL1Q9NQ48 299 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 AKT3Q9Y243 479 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 GDAQ9Y2T3 454 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 NCBP1Q09161 790 aaKnown RBP12.68□□□□□ -0.38
SNX13-202ENST00000409604 SPDYE2Q495Y8 402 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 NBPF3Q9H094 633 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 GOLPH3LQ9H4A5 285 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 POLR3EQ9NVU0 708 aa12.68□□□□□ -0.38
SNX13-202ENST00000409604 VIL1P09327 827 aaKnown RBP12.67□□□□□ -0.38
SNX13-202ENST00000409604 RBM10P98175 930 aaKnown RBP12.67□□□□□ -0.38
SNX13-202ENST00000409604 STRN3Q13033 797 aa12.67□□□□□ -0.38
SNX13-202ENST00000409604 ARHGAP44Q17R89 818 aa12.67□□□□□ -0.38
SNX13-202ENST00000409604 C11orf57Q6ZUT1 292 aaPredicted RBP12.67□□□□□ -0.38
SNX13-202ENST00000409604 CYFIP1Q7L576 1253 aa12.67□□□□□ -0.38
SNX13-202ENST00000409604 PNMA8AQ86V59 439 aaPredicted RBP12.67□□□□□ -0.38
SNX13-202ENST00000409604 NKX2-3Q8TAU0 364 aa12.67□□□□□ -0.38
SNX13-202ENST00000409604 OPTNQ96CV9 577 aa12.67□□□□□ -0.38
SNX13-202ENST00000409604 MAD2L2Q9UI95 211 aa12.67□□□□□ -0.38
SNX13-202ENST00000409604 SWSAP1Q6NVH7 229 aa12.67□□□□□ -0.38
SNX13-202ENST00000409604 CNNM4Q6P4Q7 775 aa12.67□□□□□ -0.38
SNX13-202ENST00000409604 CCDC150Q8NCX0 1101 aa12.67□□□□□ -0.38
SNX13-202ENST00000409604 NAP1L4Q99733 375 aaKnown RBP12.67□□□□□ -0.38
SNX13-202ENST00000409604 TMEM60Q9H2L4 133 aa12.67□□□□□ -0.38
SNX13-202ENST00000409604 GBA2Q9HCG7 927 aaPredicted RBP12.67□□□□□ -0.38
SNX13-202ENST00000409604 NFIBO00712 420 aa12.67□□□□□ -0.38
SNX13-202ENST00000409604 TNNI1P19237 187 aa12.67□□□□□ -0.38
SNX13-202ENST00000409604 FANCCQ00597 558 aa12.67□□□□□ -0.38
SNX13-202ENST00000409604 NYAP2Q9P242 653 aa12.67□□□□□ -0.38
SNX13-202ENST00000409604 FRMD4BQ9Y2L6 1034 aa12.67□□□□□ -0.38
SNX13-202ENST00000409604 GOLGA8IPA6NC78 632 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 GOLGA8JA6NMD2 632 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 TMEM110-MUSTN1A8MSY1 372 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 CETN3O15182 167 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 RPS6P62753 249 aaKnown RBP12.66□□□□□ -0.38
SNX13-202ENST00000409604 FAM26FQ5R3K3 315 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 SCYL3Q8IZE3 742 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 SLC5A4Q9NY91 659 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 PNMA3Q9UL41 463 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 STRCP1A6NGW2 1772 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 RPN1P04843 607 aaKnown RBP12.66□□□□□ -0.38
SNX13-202ENST00000409604 KRT5P13647 590 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 FAM114A1Q8IWE2 563 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 SLFN12Q8IYM2 578 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 TEX13BQ9BXU2 312 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 IPO5O00410 1097 aaKnown RBP12.66□□□□□ -0.38
SNX13-202ENST00000409604 CTNND1O60716 968 aaKnown RBP12.66□□□□□ -0.38
SNX13-202ENST00000409604 VCAM1P19320 739 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 ADKP55263 362 aaKnown RBP12.66□□□□□ -0.38
SNX13-202ENST00000409604 HDLBPQ00341 1268 aaKnown RBP12.66□□□□□ -0.38
SNX13-202ENST00000409604 CUL4BQ13620 913 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 CYP2W1Q8TAV3 490 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 RFX7Q2KHR2 1363 aa12.66□□□□□ -0.38
SNX13-202ENST00000409604 GOLGB1Q14789 3259 aaKnown RBP12.66□□□□□ -0.38
SNX13-202ENST00000409604 IRF6O14896 467 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 PRPF6O94906 941 aaKnown RBP12.65□□□□□ -0.38
SNX13-202ENST00000409604 FCER1AP12319 257 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 GALNT17Q6IS24 598 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 DYDC2Q96IM9 177 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 TAAR1Q96RJ0 339 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 NT5C3AQ9H0P0 336 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 ACAD9Q9H845 621 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 DNM2P50570 870 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 SEC23AQ15436 765 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 PTPN14Q15678 1187 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 ZBTB33Q86T24 672 aa12.65□□□□□ -0.38
SNX13-202ENST00000409604 MMP19Q99542 508 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms