RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CCDC144BQ3MJ40 725 aa22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 PPP1R18Q6NYC8 613 aa22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 CPLX2Q6PUV4 134 aaKnown RBP22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 CUL5Q93034 780 aa22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 PXMP2Q9NR77 195 aa22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 MEIS2O14770 477 aa22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 PKN1Q16512 942 aa22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 ANO1Q5XXA6 986 aa22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 USP17L6PQ6QN14 398 aa22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 EEPD1Q7L9B9 569 aa22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 UBE2Q1Q7Z7E8 422 aa22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 FCHSD1Q86WN1 690 aa22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 TEX2Q8IWB9 1127 aa22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 FBXO16Q8IX29 292 aaPredicted RBP22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 SLC26A6Q9BXS9 759 aa22.85■■□□□ 1.25
PDLIM2-207ENST00000409417 STXBP3O00186 592 aa22.84■■□□□ 1.25
PDLIM2-207ENST00000409417 FARP2O94887 1054 aaPredicted RBP22.84■■□□□ 1.25
PDLIM2-207ENST00000409417 EIF2AK2P19525 551 aaKnown RBP22.84■■□□□ 1.25
PDLIM2-207ENST00000409417 NAPAP54920 295 aa22.84■■□□□ 1.25
PDLIM2-207ENST00000409417 SCRN1Q12765 414 aa22.84■■□□□ 1.25
PDLIM2-207ENST00000409417 TYW1BQ6NUM6 668 aa22.84■■□□□ 1.25
PDLIM2-207ENST00000409417 TAPT1Q6NXT6 567 aa22.84■■□□□ 1.25
PDLIM2-207ENST00000409417 TRIM22Q8IYM9 498 aa22.84■■□□□ 1.25
PDLIM2-207ENST00000409417 SMARCC2Q8TAQ2 1214 aa22.84■■□□□ 1.25
PDLIM2-207ENST00000409417 TBC1D32Q96NH3 1257 aa22.84■■□□□ 1.25
PDLIM2-207ENST00000409417 PPFIA3O75145 1194 aa22.83■■□□□ 1.25
PDLIM2-207ENST00000409417 DUSP11O75319 330 aaKnown RBP22.83■■□□□ 1.25
PDLIM2-207ENST00000409417 NR3C2P08235 984 aa22.83■■□□□ 1.25
PDLIM2-207ENST00000409417 RABEP1Q15276 862 aa22.83■■□□□ 1.25
PDLIM2-207ENST00000409417 ME3Q16798 604 aa22.83■■□□□ 1.25
PDLIM2-207ENST00000409417 NOL8Q76FK4 1167 aaKnown RBP22.83■■□□□ 1.25
PDLIM2-207ENST00000409417 ARRDC4Q8NCT1 418 aa22.83■■□□□ 1.25
PDLIM2-207ENST00000409417 XPNPEP3Q9NQH7 507 aa22.83■■□□□ 1.25
PDLIM2-207ENST00000409417 CDKL5O76039 1030 aa22.82■■□□□ 1.24
PDLIM2-207ENST00000409417 MNX1P50219 401 aaPredicted RBP22.82■■□□□ 1.24
PDLIM2-207ENST00000409417 SSRP1Q08945 709 aaKnown RBP22.82■■□□□ 1.24
PDLIM2-207ENST00000409417 STXBP2Q15833 593 aa22.82■■□□□ 1.24
PDLIM2-207ENST00000409417 IQSEC1Q6DN90 963 aa22.82■■□□□ 1.24
PDLIM2-207ENST00000409417 PDCD2LQ9BRP1 358 aa22.82■■□□□ 1.24
PDLIM2-207ENST00000409417 PDGFCQ9NRA1 345 aa22.82■■□□□ 1.24
PDLIM2-207ENST00000409417 ADCYAP1R1P41586 468 aa22.81■■□□□ 1.24
PDLIM2-207ENST00000409417 MLLT1Q03111 559 aaPredicted RBP22.81■■□□□ 1.24
PDLIM2-207ENST00000409417 TNFAIP2Q03169 654 aa22.81■■□□□ 1.24
PDLIM2-207ENST00000409417 IL27Q8NEV9 243 aa22.81■■□□□ 1.24
PDLIM2-207ENST00000409417 LENG1Q96BZ8 264 aaPredicted RBP22.81■■□□□ 1.24
PDLIM2-207ENST00000409417 GLT8D2Q9H1C3 349 aa22.81■■□□□ 1.24
PDLIM2-207ENST00000409417 RIC8AQ9NPQ8 531 aa22.81■■□□□ 1.24
PDLIM2-207ENST00000409417 RBM47A0AV96 593 aaKnown RBP22.8■■□□□ 1.24
PDLIM2-207ENST00000409417 ADCY6O43306 1168 aa22.8■■□□□ 1.24
PDLIM2-207ENST00000409417 EIF3JO75822 258 aaKnown RBP22.8■■□□□ 1.24
PDLIM2-207ENST00000409417 PGM5Q15124 567 aa22.8■■□□□ 1.24
PDLIM2-207ENST00000409417 VSIG10LQ86VR7 867 aa22.8■■□□□ 1.24
PDLIM2-207ENST00000409417 CCDC12Q8WUD4 166 aaPredicted RBP22.8■■□□□ 1.24
PDLIM2-207ENST00000409417 PAWRQ96IZ0 340 aaKnown RBP22.8■■□□□ 1.24
PDLIM2-207ENST00000409417 LIMCH1Q9UPQ0 1083 aa22.8■■□□□ 1.24
PDLIM2-207ENST00000409417 FRMPD4Q14CM0 1322 aa22.8■■□□□ 1.24
PDLIM2-207ENST00000409417 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 SMCO2A6NFE2 343 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 DNM1LO00429 736 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 SMPD1P17405 629 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 ADCY7P51828 1080 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 NECAB2Q7Z6G3 386 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 DIS3LQ8TF46 1054 aaKnown RBP22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 SCFD2Q8WU76 684 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 GTF3C6Q969F1 213 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 WDR11Q9BZH6 1224 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 ESYT2A0FGR8 921 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 DEXIO95424 95 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 LARGE1O95461 756 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 PGK1P00558 417 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 LRRC41Q15345 812 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 UBE2SQ16763 222 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 DUSP28Q4G0W2 176 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 NECAB1Q8N987 351 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 IL31RAQ8NI17 732 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 ZMYND12Q9H0C1 365 aa22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 GNEQ9Y223 722 aaKnown RBP22.79■■□□□ 1.24
PDLIM2-207ENST00000409417 SPDYE3A6NKU9 549 aa22.78■■□□□ 1.24
PDLIM2-207ENST00000409417 ADAMTS4O75173 837 aa22.78■■□□□ 1.24
PDLIM2-207ENST00000409417 MYCLP12524 364 aaPredicted RBP22.78■■□□□ 1.24
PDLIM2-207ENST00000409417 CCND2P30279 289 aa22.78■■□□□ 1.24
PDLIM2-207ENST00000409417 GJC2Q5T442 439 aaPredicted RBP22.78■■□□□ 1.24
PDLIM2-207ENST00000409417 RNF180Q86T96 592 aa22.78■■□□□ 1.24
PDLIM2-207ENST00000409417 UPF3AQ9H1J1 476 aaKnown RBP22.78■■□□□ 1.24
PDLIM2-207ENST00000409417 SPC25Q9HBM1 224 aa22.78■■□□□ 1.24
PDLIM2-207ENST00000409417 SH3GLB2Q9NR46 395 aa22.78■■□□□ 1.24
PDLIM2-207ENST00000409417 SYNRGQ9UMZ2 1314 aa22.77■■□□□ 1.24
PDLIM2-207ENST00000409417 LRRC37A2A6NM11 1700 aa22.77■■□□□ 1.24
PDLIM2-207ENST00000409417 MYCNP04198 464 aaPredicted RBP22.77■■□□□ 1.24
PDLIM2-207ENST00000409417 XRRA1Q6P2D8 792 aa22.77■■□□□ 1.24
PDLIM2-207ENST00000409417 SEPT14Q6ZU15 432 aa22.77■■□□□ 1.24
PDLIM2-207ENST00000409417 CCDC148Q8NFR7 591 aa22.77■■□□□ 1.24
PDLIM2-207ENST00000409417 C11orf49Q9H6J7 331 aa22.77■■□□□ 1.24
PDLIM2-207ENST00000409417 Q9Y3F1 56 aa22.77■■□□□ 1.24
PDLIM2-207ENST00000409417 KBTBD13C9JR72 458 aa22.76■■□□□ 1.23
PDLIM2-207ENST00000409417 ST18O60284 1047 aa22.76■■□□□ 1.23
PDLIM2-207ENST00000409417 CTDNEP1O95476 244 aa22.76■■□□□ 1.23
PDLIM2-207ENST00000409417 COL6A1P12109 1028 aa22.76■■□□□ 1.23
PDLIM2-207ENST00000409417 GNA11P29992 359 aa22.76■■□□□ 1.23
PDLIM2-207ENST00000409417 GJA9P57773 515 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms